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Lsi04G023890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G023890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:31030427..31033165
RNA-Seq ExpressionLsi04G023890
SyntenyLsi04G023890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591893.1 Acetyltransferase, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4684.62Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ A+KFLRT+T+A+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEKDSLLNSNK+LKKTMWDWKQQL+++ASTDSALVPLARIKA+YGEAP+SPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLM
        A  AAT D+NSQGSKLM
Subjt:  AGHAATEDSNSQGSKLM
XP_022140674.1 uncharacterized protein LOC111011272 [Momordica charantia]6.1e-4787.39Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPI-SPS
        M+ A+KFLRTLTNASNN TLINVCLVVSF ALSARSIKQQREIEALEAEKDSLLNSNKALKK+MWDWKQQLFAEAS++SALVPLARIKA+YGE PI SP+
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPI-SPS

Query:  GAGHAATEDSNSQGSKLMV
        GAGHAATED NSQGSK +V
Subjt:  GAGHAATEDSNSQGSKLMV
XP_022937146.1 uncharacterized protein LOC111443531 [Cucurbita moschata]1.0e-4684.75Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ A+KFLRT+T+A+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEKDSLLNSNK+LKKTMWDWKQQL+++ASTDSALVPLARIKA+YGEAP+SPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
        A  AAT D+NSQGSKLMV
Subjt:  AGHAATEDSNSQGSKLMV
XP_022976887.1 uncharacterized protein LOC111477117 [Cucurbita maxima]7.2e-4887.29Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ ASKFLRTLTNA+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQL++EASTDSAL+PLARIKA+Y EAP+SPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
        A  AAT D+NSQGSKLMV
Subjt:  AGHAATEDSNSQGSKLMV
XP_038897052.1 uncharacterized protein LOC120085226 [Benincasa hispida]1.3e-4990.68Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ ASKFLRT+TNA+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEK SLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKA+YGEAPISPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
         GH ATED+NSQGSKLMV
Subjt:  AGHAATEDSNSQGSKLMV
TrEMBL top hitse value%identityAlignment
A0A0A0L380 Uncharacterized protein1.9e-3886Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ ASKFLR+L NA+N NT+INVCLVVSFAAL+ARSIKQ+R+IEALE EK+SLLNSNKALKKTMWDWKQQLFAEAST+SALVPLARIKA+YGEAPISPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
A0A1S3B9R7 uncharacterized protein LOC1034875831.2e-4383.05Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ ASKFLR L+N +N NTLINVCLV SFAALSARSIKQ+R+IEALEAEK+SLL+SNKALKKTMWDWKQQLFAEAST SALVPLARIKA+YGEAPISPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
        A +AATED+ S+ SKLMV
Subjt:  AGHAATEDSNSQGSKLMV
A0A6J1CGB8 uncharacterized protein LOC1110112722.9e-4787.39Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPI-SPS
        M+ A+KFLRTLTNASNN TLINVCLVVSF ALSARSIKQQREIEALEAEKDSLLNSNKALKK+MWDWKQQLFAEAS++SALVPLARIKA+YGE PI SP+
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPI-SPS

Query:  GAGHAATEDSNSQGSKLMV
        GAGHAATED NSQGSK +V
Subjt:  GAGHAATEDSNSQGSKLMV
A0A6J1F9J6 uncharacterized protein LOC1114435315.0e-4784.75Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ A+KFLRT+T+A+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEKDSLLNSNK+LKKTMWDWKQQL+++ASTDSALVPLARIKA+YGEAP+SPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
        A  AAT D+NSQGSKLMV
Subjt:  AGHAATEDSNSQGSKLMV
A0A6J1IGY3 uncharacterized protein LOC1114771173.5e-4887.29Show/hide
Query:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG
        M+ ASKFLRTLTNA+NNNTLINVCLV+SF ALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQL++EASTDSAL+PLARIKA+Y EAP+SPSG
Subjt:  MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSG

Query:  AGHAATEDSNSQGSKLMV
        A  AAT D+NSQGSKLMV
Subjt:  AGHAATEDSNSQGSKLMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48200.1 unknown protein5.3e-2550.43Show/hide
Query:  ASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEAST--DSALVPLARIKAVYGEAPISPSGA
        A+K    L+ A NNN +IN CL VSF  L  RS KQQ+ +EAL  +K+SL  SNKA+K TMW+WKQQLFAEA++  ++A+VPL+ +KA+YGE   + + +
Subjt:  ASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEAST--DSALVPLARIKAVYGEAPISPSGA

Query:  GHAATEDSNSQGSKLMV
        G  A EDS     K+M+
Subjt:  GHAATEDSNSQGSKLMV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGCCTCCAAATTTCTTCGCACTTTAACCAATGCCTCCAACAACAACACACTAATCAACGTCTGTTTGGTCGTTTCCTTTGCGGCACTTAGCGCAAGATCAAT
CAAGCAGCAGAGGGAAATTGAAGCTCTGGAGGCCGAGAAAGATTCACTTCTGAATTCCAATAAAGCGCTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATTCGCCG
AAGCCTCAACCGACTCCGCTTTGGTCCCTCTTGCCAGAATCAAAGCTGTCTATGGCGAAGCTCCGATTTCCCCTTCCGGAGCAGGGCATGCGGCAACCGAGGATTCAAAT
TCACAAGGCTCCAAACTTATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGCCTCCAAATTTCTTCGCACTTTAACCAATGCCTCCAACAACAACACACTAATCAACGTCTGTTTGGTCGTTTCCTTTGCGGCACTTAGCGCAAGATCAAT
CAAGCAGCAGAGGGAAATTGAAGCTCTGGAGGCCGAGAAAGATTCACTTCTGAATTCCAATAAAGCGCTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATTCGCCG
AAGCCTCAACCGACTCCGCTTTGGTCCCTCTTGCCAGAATCAAAGCTGTCTATGGCGAAGCTCCGATTTCCCCTTCCGGAGCAGGGCATGCGGCAACCGAGGATTCAAAT
TCACAAGGCTCCAAACTTATGGTTTAATGTTAGTTTTACTCTAGTTTCTGAGGTTTTGTTTCCTTTGTTCACGAAATGGCTGAAGAATCAAAATTCATTAAAATTGCATA
TTGTATGCTTGAGGCTAAAAAAAGTAGTGCAGGGTATAAGGAATTAGATTTTCCTTTTGCCGTCTAAATGTACTATCAACTTTGAATTTAGAGATCCGATTCTCTCCCTT
TCATATTGTCAAAAAGAAAAAAATGAAAAAATCCTTTTCATTTGTCATT
Protein sequenceShow/hide protein sequence
MEFASKFLRTLTNASNNNTLINVCLVVSFAALSARSIKQQREIEALEAEKDSLLNSNKALKKTMWDWKQQLFAEASTDSALVPLARIKAVYGEAPISPSGAGHAATEDSN
SQGSKLMV