; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G024080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G024080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein HAPLESS 2 isoform X1
Genome locationchr04:31217991..31220144
RNA-Seq ExpressionLsi04G024080
SyntenyLsi04G024080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142706.1 protein HAPLESS 2 isoform X1 [Cucumis sativus]1.1e-5557.14Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH
                      SVKRTRRRH RRRD+EEEFE EEGKCRH STSDS+NV EHVES+ SRR S++W+RNHRDSQ RKSLR KGHG+RVRSGRVLVYGKH
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH

Query:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        RRKSVEVGNHLNEI SFGMYGSSK+VHKERKYRRGR R
Subjt:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

XP_008444189.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo]1.7e-5658.4Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH
                      SVKRTRRRH RRRDLEEEFESEEGKC+H STSDSSNV EHVESR SR +SR+W+RNH+DSQ RKSLR KGHG+RVRSGRVLVYGKH
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH

Query:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        RRKSVEVGNH NEI SFGMYGSSKFVHKERKYRRGRQR
Subjt:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

XP_008444191.1 PREDICTED: uncharacterized protein LOC103487604 isoform X2 [Cucumis melo]1.8e-5083.97Show/hide
Query:  FLSGRSCSVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEV
        F+  +  SVKRTRRRH RRRDLEEEFESEEGKC+H STSDSSNV EHVESR SR +SR+W+RNH+DSQ RKSLR KGHG+RVRSGRVLVYGKHRRKSVEV
Subjt:  FLSGRSCSVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEV

Query:  GNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        GNH NEI SFGMYGSSKFVHKERKYRRGRQR
Subjt:  GNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

XP_038897053.1 uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]1.6e-5959.66Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSL SG+FSAIGKVFGSPLDFLSGRSC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH
                      SVKRTRRRH RRRDLEEEFESEEGKC+HGSTSDSSNVPEHVESR SRRA R+W+RNHR S+MRKSLR +GHGIRVRSGRVLVYGKH
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH

Query:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRR  QR
Subjt:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

XP_038897054.1 uncharacterized protein LOC120085227 isoform X2 [Benincasa hispida]7.1e-6367.94Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC-----------------------------------------------------SVKRTRRRHFRRRDL
        MGNVASSL SG+FSAIGKVFGSPLDFLSGRSC                                                     SVKRTRRRH RRRDL
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC-----------------------------------------------------SVKRTRRRHFRRRDL

Query:  EEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKE
        EEEFESEEGKC+HGSTSDSSNVPEHVESR SRRA R+W+RNHR S+MRKSLR +GHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKE
Subjt:  EEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKE

Query:  RKYRRGRQR
        RKYRR  QR
Subjt:  RKYRRGRQR

TrEMBL top hitse value%identityAlignment
A0A0A0L1V0 Uncharacterized protein5.3e-5657.14Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH
                      SVKRTRRRH RRRD+EEEFE EEGKCRH STSDS+NV EHVES+ SRR S++W+RNHRDSQ RKSLR KGHG+RVRSGRVLVYGKH
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH

Query:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        RRKSVEVGNHLNEI SFGMYGSSK+VHKERKYRRGR R
Subjt:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

A0A1S3B9T1 uncharacterized protein LOC103487604 isoform X28.8e-5183.97Show/hide
Query:  FLSGRSCSVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEV
        F+  +  SVKRTRRRH RRRDLEEEFESEEGKC+H STSDSSNV EHVESR SR +SR+W+RNH+DSQ RKSLR KGHG+RVRSGRVLVYGKHRRKSVEV
Subjt:  FLSGRSCSVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEV

Query:  GNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        GNH NEI SFGMYGSSKFVHKERKYRRGRQR
Subjt:  GNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

A0A1S4DVV8 protein HAPLESS 2 isoform X18.2e-5758.4Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH
                      SVKRTRRRH RRRDLEEEFESEEGKC+H STSDSSNV EHVESR SR +SR+W+RNH+DSQ RKSLR KGHG+RVRSGRVLVYGKH
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKH

Query:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        RRKSVEVGNH NEI SFGMYGSSKFVHKERKYRRGRQR
Subjt:  RRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

A0A6J1DMF3 uncharacterized protein LOC1110213522.3e-4348.95Show/hide
Query:  VMGNVASSLASGVFSAIGKVFGSPLDFLSGRSC-------------------------------------------------------------------
        +MGNVASS+ASG FSA+GK+F SPLDFLSG+SC                                                                   
Subjt:  VMGNVASSLASGVFSAIGKVFGSPLDFLSGRSC-------------------------------------------------------------------

Query:  ---------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGK
                       SVKRTRRR  RRRDLEEEFESE GK R+GS+SDSS+VPE +E R S+RASR+W+ NHR SQMRK+LR K  GIRVRSGR LVYGK
Subjt:  ---------------SVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGK

Query:  HRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR
        HRRKS EV N L EIHS G +GSSKFVH+E +Y+RGRQ+
Subjt:  HRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR

A0A6J1FIX0 uncharacterized protein LOC1114458935.7e-2642.44Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------
        MGNVASSLASG+F A+ KVFGSPLDFLSG+SC                                                                    
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSC--------------------------------------------------------------------

Query:  --------------SVKRTRRRHFRRRDLEEEFESEE-GKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGK
                      SVKRTRRRH RRRDLEEE ESEE  K R+GS+SDSSN  + +ESR S+R SR+ +R+HR SQ  K+LR   HGIRVRSGRVLVY K
Subjt:  --------------SVKRTRRRHFRRRDLEEEFESEE-GKCRHGSTSDSSNVPEHVESRISRRASRQWKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGK

Query:  HRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQ
        H                    GSSK V KER YRRGRQ
Subjt:  HRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21722.1 unknown protein7.2e-0563.64Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCS
        MGNV  S  +G   +IG  FGSPLDFLSG+SCS
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATGTCTTGGGTTTCCACTATTTCATCTTGTTTCGCAGGATTGTTTTAGTGAATGCTGAATCCACACACGTAATGGGTAATGTAGCCAGTTCATTGGCCTCTGG
TGTTTTTTCGGCCATTGGGAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAGGTCCTGCAGTGTCAAGAGAACCAGAAGACGGCACTTTCGGAGAAGAGACCTTG
AAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCGGCATGGGTCAACAAGCGATTCAAGCAATGTCCCCGAACATGTGGAGTCGAGAATTAGCAGACGGGCGTCTCGTCAA
TGGAAGAGGAACCACAGGGATTCTCAAATGAGAAAATCGTTGAGGCTGAAAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGTTGGTCTATGGTAAGCATAGAAGAAA
ATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAGAGAAAATATAGAAGAGGAAGGCAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATGTCTTGGGTTTCCACTATTTCATCTTGTTTCGCAGGATTGTTTTAGTGAATGCTGAATCCACACACGTAATGGGTAATGTAGCCAGTTCATTGGCCTCTGG
TGTTTTTTCGGCCATTGGGAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAGGTCCTGCAGTGTCAAGAGAACCAGAAGACGGCACTTTCGGAGAAGAGACCTTG
AAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCGGCATGGGTCAACAAGCGATTCAAGCAATGTCCCCGAACATGTGGAGTCGAGAATTAGCAGACGGGCGTCTCGTCAA
TGGAAGAGGAACCACAGGGATTCTCAAATGAGAAAATCGTTGAGGCTGAAAGGTCATGGAATTCGAGTAAGGAGTGGTAGAGTGTTGGTCTATGGTAAGCATAGAAGAAA
ATCTGTTGAGGTTGGGAATCATTTGAATGAGATACATAGCTTTGGGATGTATGGATCATCCAAATTTGTGCATAAAGAGAGAAAATATAGAAGAGGAAGGCAAAGATGA
Protein sequenceShow/hide protein sequence
MDNVLGFHYFILFRRIVLVNAESTHVMGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSVKRTRRRHFRRRDLEEEFESEEGKCRHGSTSDSSNVPEHVESRISRRASRQ
WKRNHRDSQMRKSLRLKGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRGRQR