| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0052206.1 replication factor C subunit 4 [Cucumis melo var. makuwa] | 8.4e-135 | 77.62 | Show/hide |
Query: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
MGG+IVRFPFP F+FTCFSE VALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Subjt: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Query: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
ASDDRGINVVRTKIKDFAGVAVSSGQRQG IIEPLASRCAKFRFKPLS EVMS
Subjt: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
Query: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQ
Subjt: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
Query: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
IFEVV EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDV+
Subjt: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
|
|
| TYK01775.1 replication factor C subunit 4 [Cucumis melo var. makuwa] | 3.9e-140 | 78.37 | Show/hide |
Query: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
MGG+IVRFPFP F+FTCFSE VALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Subjt: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Query: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
ASDDRGINVVRTKIKDFAGVAVSSGQRQG IIEPLASRCAKFRFKPLS EVMS
Subjt: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
Query: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQ
Subjt: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
Query: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
IFEVV EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| XP_004142636.1 replication factor C subunit 4 [Cucumis sativus] | 2.7e-117 | 75.08 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLETA+CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIP+EVVDALF ACKSGNFD ANK+VNNVLAEGYPVAQMLSQIFEVV EDNDLQDEQKARICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSSMQL
EYLQLLDVVSQTMQ L S+QL
Subjt: EYLQLLDVVSQTMQALSSMQL
|
|
| XP_008444196.1 PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 4 [Cucumis melo] | 1.5e-120 | 77.26 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHISNEEGLSLDGEALSTLSS+SQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV EDNDLQDEQKARICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSSMQL
EYLQLLDVVSQTMQAL SMQL
Subjt: EYLQLLDVVSQTMQALSSMQL
|
|
| XP_038897028.1 replication factor C subunit 4 [Benincasa hispida] | 1.4e-121 | 77.88 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIPREVVDALF+ACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE VVEDNDLQDEQKARICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSSMQL
EYLQLLDVVSQTMQALSSMQL
Subjt: EYLQLLDVVSQTMQALSSMQL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KYI8 AAA domain-containing protein | 1.3e-117 | 75.08 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLETA+CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIP+EVVDALF ACKSGNFD ANK+VNNVLAEGYPVAQMLSQIFEVV EDNDLQDEQKARICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSSMQL
EYLQLLDVVSQTMQ L S+QL
Subjt: EYLQLLDVVSQTMQALSSMQL
|
|
| A0A1S3B9T6 LOW QUALITY PROTEIN: replication factor C subunit 4 | 7.5e-121 | 77.26 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHISNEEGLSLDGEALSTLSS+SQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV EDNDLQDEQKARICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSSMQL
EYLQLLDVVSQTMQAL SMQL
Subjt: EYLQLLDVVSQTMQALSSMQL
|
|
| A0A5A7UDC8 Replication factor C subunit 4 | 4.1e-135 | 77.62 | Show/hide |
Query: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
MGG+IVRFPFP F+FTCFSE VALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Subjt: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Query: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
ASDDRGINVVRTKIKDFAGVAVSSGQRQG IIEPLASRCAKFRFKPLS EVMS
Subjt: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
Query: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQ
Subjt: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
Query: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
IFEVV EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDV+
Subjt: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
|
|
| A0A5D3BRF2 Replication factor C subunit 4 | 1.9e-140 | 78.37 | Show/hide |
Query: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
MGG+IVRFPFP F+FTCFSE VALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Subjt: MGGEIVRFPFPRFRFTCFSECVALSQPLFIFPIDSRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELN
Query: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
ASDDRGINVVRTKIKDFAGVAVSSGQRQG IIEPLASRCAKFRFKPLS EVMS
Subjt: ASDDRGINVVRTKIKDFAGVAVSSGQRQG------------------------------------------------IIEPLASRCAKFRFKPLSVEVMS
Query: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
KRILHISNEEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQ
Subjt: KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQ
Query: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
IFEVV EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: IFEVV-EDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| A0A6J1IVB8 replication factor C subunit 4 | 5.5e-116 | 74.53 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTALAI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMSKRILHISNEEGLSLDGEALSTL SISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ IIPREVVD LF ACKSGNFD+ANKEVNNV+AEGYPVAQMLSQIFEVV E +DLQDEQKA+ICKKLAEADKCLVDGAD
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-EDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQAL-SSMQL
EYLQLLDVVSQTMQAL SSMQL
Subjt: EYLQLLDVVSQTMQAL-SSMQL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P35249 Replication factor C subunit 4 | 5.2e-63 | 42.41 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPK V +VA Q+EVV VL +LE A P++LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + VS + G
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
IIEPL SRC+KFRFKPLS ++ +R+L I+ +E + + E ++ L +S+GDLR+AIT+
Subjt: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
Query: LQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARICKKLAEADKCLVDGADE
LQ +IP E +D +F AC+SG+FD V +++ EG+ Q+++Q+ +VV +N+L D+QK+ I +KLAE DKCL DGADE
Subjt: LQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARICKKLAEADKCLVDGADE
Query: YLQLLDVVSQTMQALS
+LQL+ + + MQ LS
Subjt: YLQLLDVVSQTMQALS
|
|
| Q54MD4 Probable replication factor C subunit 4 | 4.7e-56 | 38.68 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSS-----------
RPK V DV++Q++V+ L +L T + PH+LFYGPPGTGKT+T LAI+ ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV+
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSS-----------
Query: -------------------------------------GQRQGIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
II+PLASRCAKFRFKPL +R+ IS +EG+ + + +S GD+R+AIT
Subjt: -------------------------------------GQRQGIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
YLQ +P +++ L CK +FD V +++A+GYPV+Q++SQ+F+ V+ DL QK+ I K+ D+ L+DG++
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALSS
E+LQL D+ S M+ L++
Subjt: EYLQLLDVVSQTMQALSS
|
|
| Q93ZX1 Replication factor C subunit 4 | 1.2e-102 | 64.69 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S RQ
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
YLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D QKA+ICK LAE DK LVDGA
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
Query: DEYLQLLDVVSQTMQALSSM
DEYLQLLDV S T+ ALS M
Subjt: DEYLQLLDVVSQTMQALSSM
|
|
| Q99J62 Replication factor C subunit 4 | 1.7e-61 | 41.96 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPK V +VA QDEVV VL +LE A P++LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + VS + G
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
IIEPL SRC+KFRFKPLS ++ +R+L I+ +E + + E ++ L IS+GDLR+AIT+
Subjt: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
Query: LQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
LQ +IP +D +FTAC SG+FD V N++ EG+ Q+++Q+ + ++E+ +L D+ K+ I +KLAE DKCL DGAD
Subjt: LQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARICKKLAEADKCLVDGAD
Query: EYLQLLDVVSQTMQALS
E+LQL+ + + MQ L+
Subjt: EYLQLLDVVSQTMQALS
|
|
| Q9FXM3 Replication factor C subunit 2 | 8.5e-98 | 61.64 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RP+QVKDVAHQ+EVVRVLT TL+TA PHMLFYGPPGTGKTTTALAI++QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S ++ G
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLD +AL+TLS+IS GDLRRAITY
Subjt: -----------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITY
Query: LQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEV-VEDNDLQDEQKARICKKLAEADKCLVDGADE
LQ IP +VV +L +CKSG FD+ANKEVNN++A+GYPV+Q++SQ +V V +D+ DEQKARICKKL EADKCLVDGADE
Subjt: LQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEV-VEDNDLQDEQKARICKKLAEADKCLVDGADE
Query: YLQLLDVVSQTMQALSSM
YLQLLDV S+T++AL M
Subjt: YLQLLDVVSQTMQALSSM
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21690.1 ATPase family associated with various cellular activities (AAA) | 8.2e-104 | 64.69 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S RQ
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
YLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D QKA+ICK LAE DK LVDGA
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
Query: DEYLQLLDVVSQTMQALSSM
DEYLQLLDV S T+ ALS M
Subjt: DEYLQLLDVVSQTMQALSSM
|
|
| AT1G21690.2 ATPase family associated with various cellular activities (AAA) | 1.8e-95 | 61.56 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQ+EV CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S RQ
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
YLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D QKA+ICK LAE DK LVDGA
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
Query: DEYLQLLDVVSQTMQALSSM
DEYLQLLDV S T+ ALS M
Subjt: DEYLQLLDVVSQTMQALSSM
|
|
| AT1G21690.3 ATPase family associated with various cellular activities (AAA) | 1.3e-93 | 63.61 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S RQ
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADK
YLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D QKA+ICK LAE DK
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADK
|
|
| AT1G21690.4 ATPase family associated with various cellular activities (AAA) | 2.6e-97 | 62.5 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
RPKQVKDVAHQ+EVVRVLTNTL+TA CPHMLFYGPPGTGKTTTALAI+HQLFG VLELNASDDRGINVVRTKIKDFA VAV S RQ
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQG------
Query: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
IIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDGEALSTLSSISQGDLRRAIT
Subjt: ------------------------------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAIT
Query: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
YLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D QKA+ICK LAE DK LVDGA
Subjt: YLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQKARICKKLAEADKCLVDGA
Query: DEYLQLLDVVSQTMQALSSM
DEYLQLLDV S T+ ALS M
Subjt: DEYLQLLDVVSQTMQALSSM
|
|
| AT1G63160.1 replication factor C 2 | 3.6e-27 | 29.71 | Show/hide |
Query: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA-----------------
RP +V D+ ++ V L + P+++ GPPGTGKTT+ LA++H+L G YK VLELNASDDRGI+VVR KIK FA
Subjt: RPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA-----------------
Query: -GVAVSSGQRQG-----------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQII--
+++SG +Q IIEP+ SRCA RF LS + + R+L + E + E L + + GD+R+A+ LQ
Subjt: -GVAVSSGQRQG-----------------------IIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQII--
Query: ------------------PREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARICKKLAEADKCLVDGADEYLQL---
P V + + +S FDIA + + GY +++ +F ++++ D+ + K K+ A + DG YLQL
Subjt: ------------------PREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARICKKLAEADKCLVDGADEYLQL---
Query: ---LDVVSQTMQA
L +V +T +A
Subjt: ---LDVVSQTMQA
|
|
