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Lsi05G000040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:59046..72881
RNA-Seq ExpressionLsi05G000040
SyntenyLsi05G000040
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]7.8e-1173.33Show/hide
Query:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
        + AL G+C GQPG EVPLSSWK+NILN+M+K+SLF+ CKSKDDDL
Subjt:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
KAE8651473.1 hypothetical protein Csa_001696 [Cucumis sativus]1.1e-0965.22Show/hide
Query:  LVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQ
        +VM+QTC A+PF+QW+V+VVN+MK G PL+L C+S D+DLGVHNL+
Subjt:  LVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQ
KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]7.8e-1175.56Show/hide
Query:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
        + AL G+C GQPG EVPLSSWKINILN+M+K++LFL CKSKDDDL
Subjt:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]7.8e-1175.56Show/hide
Query:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
        + AL G+C GQPG EVPLSSWKINILN+M+K++LFL CKSKDDDL
Subjt:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]7.8e-1173.33Show/hide
Query:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
        + AL G+C GQPG EVPLSSWK+NILN+M+K+SLF+ CKSKDDDL
Subjt:  MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDL
TrEMBL top hitse value%identityAlignment
A0A1S4DWP0 S-protein homolog2.1e-0652Show/hide
Query:  QTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYT
        Q CFA  F +WTV+V N+MK+G+ L +HCKSKDDDLG+  L +    T++
Subjt:  QTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYT
A0A5N6QH19 S-protein homolog3.1e-0552.38Show/hide
Query:  VQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
        +++C +  F  W VQ+VN +  G  LFLHCKS+D+DLG+HNL
Subjt:  VQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
A0A6J1CQW3 S-protein homolog3.1e-0568.75Show/hide
Query:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
        +W V +VN + SGQ LF+HCKSKDDDLG+HNL
Subjt:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
A0A6J1DEX4 S-protein homolog1.8e-0565.71Show/hide
Query:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
        P   WTV +VN + +GQ LF+HCKSKDDDLG HNL
Subjt:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNL
A0A6J1ESI0 S-protein homolog6.2e-0651.02Show/hide
Query:  VMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNN
        VM ++CFA  F+ W ++V N+M  G+ L +HCKSKDDDLG   L++ NN
Subjt:  VMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNN
SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 17.8e-0648.84Show/hide
Query:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
        +W V VVN + +G+ LF+HCKSK+DDLG  NL+  N  ++  G
Subjt:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
O23020 S-protein homolog 57.3e-0454.55Show/hide
Query:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH
        PF + TV  + N+  G PL +HCKSK DDLG+H
Subjt:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH
Q2HQ46 S-protein homolog 741.5e-0441.86Show/hide
Query:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
        +W V V N + +G+ LF+HCKSK++DLG  NL+ ++  ++  G
Subjt:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family5.2e-0554.55Show/hide
Query:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH
        PF + TV  + N+  G PL +HCKSK DDLG+H
Subjt:  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH
AT4G16295.1 S-protein homologue 15.5e-0748.84Show/hide
Query:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
        +W V VVN + +G+ LF+HCKSK+DDLG  NL+  N  ++  G
Subjt:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
AT4G29035.1 Plant self-incompatibility protein S1 family1.0e-0541.86Show/hide
Query:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG
        +W V V N + +G+ LF+HCKSK++DLG  NL+ ++  ++  G
Subjt:  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCATTGGGTGGACAATGCTACGGGCAGCCAGGTGAAGAGGTTCCATTGAGTTCATGGAAGATTAACATTTTGAATGATATGAGCAAAGAGTCGTTGTTTCTTCA
TTGCAAGTCTAAAGACGATGATTTGGTGATGGTACAAACATGCTTTGCTATTCCATTTGAGCAATGGACAGTTCAAGTAGTAAACAACATGAAAAGTGGTCAACCTCTAT
TTCTTCATTGCAAGTCCAAAGACGACGATTTGGGAGTTCATAATTTGCAATTAGTGAACAACCAAACTTACACTGTGGGAAACACAAAAACAAAAGCCAAGAAAGCAGGT
GGAGGAGATTTCATATGGCAGAATAATCGCCATGGCCGTCTTCTTGAGCGCAAGGCTGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCATTGGGTGGACAATGCTACGGGCAGCCAGGTGAAGAGGTTCCATTGAGTTCATGGAAGATTAACATTTTGAATGATATGAGCAAAGAGTCGTTGTTTCTTCA
TTGCAAGTCTAAAGACGATGATTTGGTGATGGTACAAACATGCTTTGCTATTCCATTTGAGCAATGGACAGTTCAAGTAGTAAACAACATGAAAAGTGGTCAACCTCTAT
TTCTTCATTGCAAGTCCAAAGACGACGATTTGGGAGTTCATAATTTGCAATTAGTGAACAACCAAACTTACACTGTGGGAAACACAAAAACAAAAGCCAAGAAAGCAGGT
GGAGGAGATTTCATATGGCAGAATAATCGCCATGGCCGTCTTCTTGAGCGCAAGGCTGAGAAATAA
Protein sequenceShow/hide protein sequence
MFALGGQCYGQPGEEVPLSSWKINILNDMSKESLFLHCKSKDDDLVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHNLQLVNNQTYTVGNTKTKAKKAG
GGDFIWQNNRHGRLLERKAEK