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Lsi05G000080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlow-temperature-induced 65 kDa protein
Genome locationchr05:119050..119830
RNA-Seq ExpressionLsi05G000080
SyntenyLsi05G000080
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR037491 - Low-temperature-induced 78kDa/65kDa


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465872.2 PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo]1.4e-1577.61Show/hide
Query:  EGKE--EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        EGKE  EE  +HHEKKSVLKKVKAKAKKIKDTITKH H HDH H E++++DDE+DEV+EDPEIQGAP
Subjt:  EGKE--EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

XP_011652891.1 low-temperature-induced 65 kDa protein isoform X2 [Cucumis sativus]1.7e-1679.71Show/hide
Query:  VEGKE---EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        VEGKE   E D +HHEKKSVLKKVKAKAKKIKDTITKHGHGHDH H E++  DDE+DEV+EDPEIQGAP
Subjt:  VEGKE---EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

XP_031739118.1 low-temperature-induced 65 kDa protein isoform X1 [Cucumis sativus]1.7e-1679.71Show/hide
Query:  VEGKE---EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        VEGKE   E D +HHEKKSVLKKVKAKAKKIKDTITKHGHGHDH H E++  DDE+DEV+EDPEIQGAP
Subjt:  VEGKE---EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

XP_038888501.1 low-temperature-induced 65 kDa protein isoform X1 [Benincasa hispida]1.6e-2287.84Show/hide
Query:  LASVVGVEGKEEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH--YEDEDDDDEDDEVIEDPEIQGAP
        LA    VEGKEEED Q HEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH  YEDEDD+DEDDEVIEDPEIQGAP
Subjt:  LASVVGVEGKEEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH--YEDEDDDDEDDEVIEDPEIQGAP

XP_038888502.1 low-temperature-induced 65 kDa protein isoform X2 [Benincasa hispida]1.6e-2287.84Show/hide
Query:  LASVVGVEGKEEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH--YEDEDDDDEDDEVIEDPEIQGAP
        LA    VEGKEEED Q HEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH  YEDEDD+DEDDEVIEDPEIQGAP
Subjt:  LASVVGVEGKEEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDH--YEDEDDDDEDDEVIEDPEIQGAP

TrEMBL top hitse value%identityAlignment
A0A0B0MRR8 Low-temperature-induced 65 kDa-like protein1.1e-1362.67Show/hide
Query:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP
        E ED QHHEK SVLKKVKAKAKKIKDTI KHGHGH+HDH               DE+DD+E+DE+++DPE+ GAP
Subjt:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP

A0A1S3CPX7 low-temperature-induced 65 kDa protein6.8e-1677.61Show/hide
Query:  EGKE--EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        EGKE  EE  +HHEKKSVLKKVKAKAKKIKDTITKH H HDH H E++++DDE+DEV+EDPEIQGAP
Subjt:  EGKE--EEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

A0A1U8MHP0 low-temperature-induced 65 kDa protein-like1.1e-1362.67Show/hide
Query:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP
        E ED QHHEK SVLKKVKAKAKKIKDTI KHGHGH+HDH               DE+DD+E+DE+++DPE+ GAP
Subjt:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP

A0A2P5WQ50 Uncharacterized protein1.1e-1362.67Show/hide
Query:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP
        E ED QHHEK SVLKKVKAKAKKIKDTI KHGHGH+HDH               DE+DD+E+DE+++DPE+ GAP
Subjt:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP

A0A5D2N442 Uncharacterized protein1.1e-1362.67Show/hide
Query:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP
        E ED QHHEK SVLKKVKAKAKKIKDTI KHGHGH+HDH               DE+DD+E+DE+++DPE+ GAP
Subjt:  EEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYE-------------DEDDDDEDDEVIEDPEIQGAP

SwissProt top hitse value%identityAlignment
Q04980 Low-temperature-induced 65 kDa protein1.2e-0964.52Show/hide
Query:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        E+ +HHEK    VLKKVK KAKKIK+++TKHG+GHDHD    EDDDDE DE  +DPE+ GAP
Subjt:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

Q06738 Low-temperature-induced 78 kDa protein3.1e-0547.76Show/hide
Query:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHG----HGHDHDHYEDEDDDDE-DDEVIEDPEIQGAP
        E+ +HHE     + +KVKA+AKK K+++TKHG    H  DHD  E++DDDDE + EVI+ P + G P
Subjt:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHG----HGHDHDHYEDEDDDDE-DDEVIEDPEIQGAP

Arabidopsis top hitse value%identityAlignment
AT4G25580.1 CAP160 protein1.5e-0750Show/hide
Query:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYE------DEDDDDEDDEVIEDPEIQGAPYR
        E+  HHEK    VLKKVK KAKKIK+ +TKHGHGH+HD  E      D D +D++D+  ++    GAP R
Subjt:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYE------DEDDDDEDDEVIEDPEIQGAPYR

AT5G52300.1 CAP160 protein8.5e-1164.52Show/hide
Query:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        E+ +HHEK    VLKKVK KAKKIK+++TKHG+GHDHD    EDDDDE DE  +DPE+ GAP
Subjt:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

AT5G52300.2 CAP160 protein2.5e-1063.93Show/hide
Query:  DAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP
        + +HHEK    VLKKVK KAKKIK+++TKHG+GHDHD    EDDDDE DE  +DPE+ GAP
Subjt:  DAQHHEK--KSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAP

AT5G52310.1 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)2.2e-0647.76Show/hide
Query:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHG----HGHDHDHYEDEDDDDE-DDEVIEDPEIQGAP
        E+ +HHE     + +KVKA+AKK K+++TKHG    H  DHD  E++DDDDE + EVI+ P + G P
Subjt:  EDAQHHEK--KSVLKKVKAKAKKIKDTITKHG----HGHDHDHYEDEDDDDE-DDEVIEDPEIQGAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTTAGCTAGCGTTGTAGGTGTGGAAGGAAAAGAAGAAGAAGATGCGCAGCATCATGAGAAGAAGTCAGTGTTGAAGAAAGTGAAGGCAAAAGCTAAAAAGAT
TAAAGACACTATTACAAAGCATGGCCATGGCCATGATCATGATCATTATGAAGATGAAGATGATGACGATGAAGATGATGAAGTCATAGAAGATCCTGAAATTCAGGGAG
CACCATATAGGAGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTTAGCTAGCGTTGTAGGTGTGGAAGGAAAAGAAGAAGAAGATGCGCAGCATCATGAGAAGAAGTCAGTGTTGAAGAAAGTGAAGGCAAAAGCTAAAAAGAT
TAAAGACACTATTACAAAGCATGGCCATGGCCATGATCATGATCATTATGAAGATGAAGATGATGACGATGAAGATGATGAAGTCATAGAAGATCCTGAAATTCAGGGAG
CACCATATAGGAGGCTTTAA
Protein sequenceShow/hide protein sequence
MVDLASVVGVEGKEEEDAQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHDHYEDEDDDDEDDEVIEDPEIQGAPYRRL