; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G000230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGolgin subfamily A member 6-like protein 4, putative
Genome locationchr05:324899..328733
RNA-Seq ExpressionLsi05G000230
SyntenyLsi05G000230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]7.5e-5885.53Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R  ++KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTS-TLQTDKNQQTQNLASDSTPQNT
        GEER M++MVKVMQQQA+ EKAEAGKVTS  LQT+KNQQTQNLASD+TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTS-TLQTDKNQQTQNLASDSTPQNT
XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]6.5e-6289.4Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL ++KRLKQAEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
        GEER+MK+MVKVMQQQA+F++AEAGKVT+TLQT+KNQQTQNLASD+TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]5.0e-6291.45Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRL++EKRLKQAEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKV-TSTLQTDKNQQTQNLASDSTPQNT
        GEER MK+MVKVMQQQA+FEKAEAGKV TSTLQTDKNQ  QNLASD TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKV-TSTLQTDKNQQTQNLASDSTPQNT
XP_023532534.1 uncharacterized protein LOC111794666 [Cucurbita pepo subsp. pepo]4.1e-5687.94Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MD++LEFGRRALFYV+VLSGYEERRIRSFRL++EKRLK+AEERKAAIR+IPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
        GEERTMKNMVKVMQQQA+ EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]2.0e-6696.03Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRL++EKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
        GEERTMK+MVKVMQQQA+FEKAEAGKVTSTLQTDKNQQTQNLASD+TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
TrEMBL top hitse value%identityAlignment
A0A0A0LKE0 Uncharacterized protein3.6e-5885.53Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R  ++KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTS-TLQTDKNQQTQNLASDSTPQNT
        GEER M++MVKVMQQQA+ EKAEAGKVTS  LQT+KNQQTQNLASD+TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTS-TLQTDKNQQTQNLASDSTPQNT
A0A1S3CPZ1 uncharacterized protein LOC1035034733.2e-6289.4Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL ++KRLKQAEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
        GEER+MK+MVKVMQQQA+F++AEAGKVT+TLQT+KNQQTQNLASD+TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT
A0A6J1BQI2 uncharacterized protein LOC1110045172.4e-6291.45Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRL++EKRLKQAEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKV-TSTLQTDKNQQTQNLASDSTPQNT
        GEER MK+MVKVMQQQA+FEKAEAGKV TSTLQTDKNQ  QNLASD TPQ T
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKV-TSTLQTDKNQQTQNLASDSTPQNT
A0A6J1H1D7 uncharacterized protein LOC1114595451.3e-5587.23Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDK+LEFGRRALFYV+VLSGYEERRIRS RL++EKRLK+AEERKAAIR+IPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
        GEERTMKNMVKV+QQQA+ EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
A0A6J1K1F5 uncharacterized protein LOC1114915404.4e-5687.94Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        MDK+LE GRRALFYV+VLSGYEERRIRSFRL++EKRLK+AEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE E LM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
        GEERTMKNMVKVMQQQA+ EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKVTSTLQTDKNQQTQN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17010.1 unknown protein9.2e-3856.58Show/hide
Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE
        M+KLLE+GR+A+FYVRVLSGYEERRIRS+RLQ+EKR++QA +RK  I ++PEQ +L EVRRMVEEMQ LNK++E TE+ IE+YFKPIDK A  +M+IQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERTMKNMVKVMQQQAVFEKAEAGKV-----TSTLQTDKNQQTQNLASDST
        GE++TM  M+   QQ+A+ +  EA K+      + + TD N   +   S+S+
Subjt:  GEERTMKNMVKVMQQQAVFEKAEAGKV-----TSTLQTDKNQQTQNLASDST

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGCTTTTGGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGTTTAGGTTGCAGATCGAAAAGCGTCT
CAAACAGGCGGAGGAAAGAAAAGCTGCTATAAGAAAGATACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAGGAGATGCAAACTCTTAATAAAAAGTTAG
AGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAATTCAACTTGAAGGAGAAGAGAGAACTATGAAAAACATGGTT
AAAGTTATGCAGCAACAGGCTGTGTTTGAAAAGGCTGAGGCAGGTAAAGTTACAAGTACTCTTCAAACTGACAAAAATCAACAAACTCAAAACCTTGCATCTGACTCAAC
CCCTCAAAATACTTAG
mRNA sequenceShow/hide mRNA sequence
CGGGGATGAGGATGACCATTCCCGCTCCTATTCTGTCCGGTGGACATTTCTAAGAATAAATTAAATCTTTTATAAGTATACTTATTAGGCACAAACTCAAAAGCGAGGGA
CTGATTTGTAATTTAACTAAAAAAATTTTCCCATGAAAATTAATAAATAATGCTCTAGAGATGCATAGTAAAAATCATTTTTAAGACCTGAGCTCGATGAAGCCATATAT
AAGCTTCGAAGCAAACGGCCACGAGAAGGGAAAAAACACAGCGTCCCAGCAGTACTGTATTCGTTTCAAATGGATTAATGGCTTCTTCTGAGTTGCAGATTCGATTCTAC
TTGACTTTGCAGGGAGATCTGTGTGTTGAATAGCTTGAGGGATTTGGATGGACAAGCTTTTGGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTAT
GAAGAGCGGCGGATTCGATCGTTTAGGTTGCAGATCGAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGCTGCTATAAGAAAGATACCAGAACAGGCTATCTTAGGAGA
AGTTCGTCGTATGGTTGAGGAGATGCAAACTCTTAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAA
TGAAAATTCAACTTGAAGGAGAAGAGAGAACTATGAAAAACATGGTTAAAGTTATGCAGCAACAGGCTGTGTTTGAAAAGGCTGAGGCAGGTAAAGTTACAAGTACTCTT
CAAACTGACAAAAATCAACAAACTCAAAACCTTGCATCTGACTCAACCCCTCAAAATACTTAGCTGAGAAAATTCTGTGAGAAGTTACTGATGATTTGATTAGATTAATA
AAATCTGGTACTGTGCAATTTTGGTGCCACCATTGTCTTAAAAATACACTTCACTCTATAGTTGTGATTATAAAGCCCTTTAGTTTTAATTACAGAGGCATTATTGATTG
TTTCTAGTTTATTATATGATAATTTCTTTTACCCAATTCAGATGTATGGATTTGTGATTGTCAACCTCAAGTTTTTCTAGTATGGAACTGTTTTTCTCACTTTCCTTGTA
TTTATTATCGGTGCGGCGAACCGATTACACCCTTAGCTATGTCTCCTCTTTTGTG
Protein sequenceShow/hide protein sequence
MDKLLEFGRRALFYVRVLSGYEERRIRSFRLQIEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLEGEERTMKNMV
KVMQQQAVFEKAEAGKVTSTLQTDKNQQTQNLASDSTPQNT