; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G000320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L37a
Genome locationchr05:555365..556320
RNA-Seq ExpressionLsi05G000320
SyntenyLsi05G000320
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1873427.1 hypothetical protein Lal_00027465, partial [Lupinus albus]6.3e-3387.21Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGASLRKQIKKMEVSQHSK+FCEFCGK          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
KAF7137563.1 hypothetical protein RHSIM_Rhsim07G0119700 [Rhododendron simsii]3.7e-3386.52Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFL--AHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK       +    YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFL--AHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
KVH88611.1 hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus]1.3e-3385.71Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK     + C      YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
OVA06874.1 Ribosomal protein L37ae [Macleaya cordata]3.7e-3389.53Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGASLRKQIKKMEVSQH+KYFCEFCGKAS       +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
RXI00911.1 hypothetical protein DVH24_001145 [Malus domestica]1.8e-3288.51Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
TrEMBL top hitse value%identityAlignment
A0A103XDD5 Uncharacterized protein6.1e-3485.71Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK     + C      YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
A0A1U7XSD1 60S ribosomal protein L37a8.8e-3388.51Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
A0A200Q8W6 Ribosomal protein L37ae1.8e-3389.53Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGASLRKQIKKMEVSQH+KYFCEFCGKAS       +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
A0A6A5MJL7 Uncharacterized protein (Fragment)3.0e-3387.21Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGASLRKQIKKMEVSQHSK+FCEFCGK          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
A0A6J1ICH2 60S ribosomal protein L37a8.8e-3388.51Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-12.6e-3485.06Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
P0DKK2 60S ribosomal protein L37a-22.6e-3485.06Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9SRK6 Putative 60S ribosomal protein L37a-15.9e-3483.91Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQH+KYFCEFCGK          Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9XHE4 60S ribosomal protein L37a2.0e-3487.36Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9ZRS8 60S ribosomal protein L37a1.7e-3384.88Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGASLRKQIKKMEVSQHSK+FCEFCGK          +AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein4.2e-3583.91Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TRYGASLRKQIKKMEVSQH+KYFCEFCGK          Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
AT3G60245.1 Zinc-binding ribosomal protein family protein1.6e-3483.72Show/hide
Query:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TRYGAS+RKQIKKMEVSQHSKYFCEFCGK          Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCCGCTATGGTGCCAGTCTGAGAAAGCAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTTTGTGGAAAGGCAAGTAGTTGTCCTCTCTTTTT
GGCCCATTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAG
TGAGAAGCACTATTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ACCCGCTATGGTGCCAGTCTGAGAAAGCAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTTTGTGGAAAGGCAAGTAGTTGTCCTCTCTTTTT
GGCCCATTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAG
TGAGAAGCACTATTAGGAGGCTGAGAGAGCAGACTGAAAGTTAAGCCATCTTCATTGCCCAATTTTTGCCTTTTTTTCAAAAAGGAAAAAGATTACTATCTCTCTGGACT
TCTCTTCATATCAATGTTGTAGGAATTGGTTATTAAAATTAATTGAAACTGATCCTTTTCTTCATTTCTTATACTGTTGGCCACTTTTCTATTGATTGTCAATCGAGTTT
CATCCAAATTTACGTATTTGGCATCTAAGGTTGAAATAGATTAAATGAGTGATCTGCTTTTGTTTACAATACCTTTTTCAGATTACTAGGAGTTAATGTTATTGTCTACA
TCATAA
Protein sequenceShow/hide protein sequence
TRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES