; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G000670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine cleavage system H protein
Genome locationchr05:1341207..1343421
RNA-Seq ExpressionLsi05G000670
SyntenyLsi05G000670
Gene Ontology termsGO:0009249 - protein lipoylation (biological process)
GO:0019464 - glycine decarboxylation via glycine cleavage system (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005960 - glycine cleavage complex (cellular component)
InterPro domainsIPR000089 - Biotin/lipoyl attachment
IPR002930 - Glycine cleavage system H-protein
IPR003016 - 2-oxo acid dehydrogenase, lipoyl-binding site
IPR011053 - Single hybrid motif
IPR017453 - Glycine cleavage system H-protein, subgroup
IPR033753 - Glycine cleavage system H-protein/Simiate


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571837.1 Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5688.37Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLK++P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTK CEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

XP_004148493.1 glycine cleavage system H protein 3, mitochondrial [Cucumis sativus]3.3e-5789.92Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLKE+P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNP ELDSLLGPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

XP_008465945.1 PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo]1.1e-5790.7Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLKETP         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNP ELDSLLGPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

XP_022952526.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata]2.8e-5688.37Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLK++P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTK CEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

XP_038876916.1 glycine cleavage system H protein, mitochondrial [Benincasa hispida]6.6e-5890.7Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLKE+P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

TrEMBL top hitse value%identityAlignment
A0A0A0LI67 Glycine cleavage system H protein1.6e-5789.92Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLKE+P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNP ELDSLLGPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

A0A1S3CQ17 Glycine cleavage system H protein5.4e-5890.7Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLKETP         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNP ELDSLLGPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

A0A6J1GKG7 Glycine cleavage system H protein1.3e-5688.37Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLK++P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTK CEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

A0A6J1I8M1 Glycine cleavage system H protein1.3e-5688.37Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVE+NPQLK++P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTK CEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

A0A6J1JYK8 Glycine cleavage system H protein6.6e-5686.82Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK
        VLDGLKYASSHEWVKHEG VAT+GITDHAQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVE+NPQLK++P         GGWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETP---------GGWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPSNPAELDSL GPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

SwissProt top hitse value%identityAlignment
P25855 Glycine cleavage system H protein 1, mitochondrial1.8e-5076.74Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK
        VL+GLKYA+SHEWVKHEGSVAT+GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+E+N +L E+PG         GWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPS+PAEL+SL+GPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

P46485 Glycine cleavage system H protein, mitochondrial6.6e-5379.07Show/hide
Query:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI
        AVLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE GGSV++   FGAVESVKATSD+NSPISGEIVE+N +L +TPG         GWMI
Subjt:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI

Query:  KVKPSNPAELDSLLGPKEYTKFCEEEDAA
        KVKPSNP+ELDSL+GPKEYTKFCEEE AA
Subjt:  KVKPSNPAELDSLLGPKEYTKFCEEEDAA

P49359 Glycine cleavage system H protein, mitochondrial2.1e-5479.23Show/hide
Query:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI
        +VLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVE+N +L ETPG         GWMI
Subjt:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI

Query:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH
        KVKPSNP+ELDSL+G KEYTKFCEEED+AH
Subjt:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH

Q39732 Glycine cleavage system H protein, mitochondrial9.2e-5580Show/hide
Query:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI
        +VLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVE+N +L ETPG         GWMI
Subjt:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI

Query:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH
        KVKPSNP+ELDSL+G KEYTKFCEEEDAAH
Subjt:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH

Q9LQL0 Glycine cleavage system H protein 3, mitochondrial2.1e-5175.38Show/hide
Query:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI
        +VL+GLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++E+N +L E+PG         GWMI
Subjt:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI

Query:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH
        KVKPS+PAEL++L+GPKEYTKFCEEEDAAH
Subjt:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH

Arabidopsis top hitse value%identityAlignment
AT1G32470.1 Single hybrid motif superfamily protein1.5e-5275.38Show/hide
Query:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI
        +VL+GLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++E+N +L E+PG         GWMI
Subjt:  AVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMI

Query:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH
        KVKPS+PAEL++L+GPKEYTKFCEEEDAAH
Subjt:  KVKPSNPAELDSLLGPKEYTKFCEEEDAAH

AT2G35120.1 Single hybrid motif superfamily protein1.6e-4163.57Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK
        VL  LKYA SHEWVK +G+ AT GITDHAQDHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VE+N +L E+PG         GW+IK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        V+ S+  E + L+   +Y+KFCEEEDA H
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH

AT2G35370.1 glycine decarboxylase complex H1.3e-5176.74Show/hide
Query:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK
        VL+GLKYA+SHEWVKHEGSVAT+GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+E+N +L E+PG         GWMIK
Subjt:  VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPG---------GWMIK

Query:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH
        VKPS+PAEL+SL+GPKEYTKFCEEEDAAH
Subjt:  VKPSNPAELDSLLGPKEYTKFCEEEDAAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGACGAAGAAGAAGAAACCAGAGCAAATTAAACCAAAGAAAAAAACTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTCTCATCATCT
AAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACCGGTAGTTTTTTGCTCTTTACTACTTTGCATGCAAACTGTTTGTGTAAATGCCTCTATGAAGT
TTGAGTTCGTTTTTTACACTCTTGGTTCTTGTTTCTGTTCTGTTGTGTTGTTTAATTCTCAATTATGGTTATTCTTTTCTGGCTTATTGGTTGGATTTGCAGTTTTGGAT
GGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCAACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGA
TCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATTAACTCCCCAATCTCTGGTGAGATTGTTGAAA
TTAACCCACAGCTTAAGGAAACTCCTGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTAGATTCCTTGCTTGGTCCAAAGGAATATACAAAGTTTTGT
GAGGAAGAAGATGCAGCCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGACGAAGAAGAAGAAACCAGAGCAAATTAAACCAAAGAAAAAAACTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTCTCATCATCT
AAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACCGGTAGTTTTTTGCTCTTTACTACTTTGCATGCAAACTGTTTGTGTAAATGCCTCTATGAAGT
TTGAGTTCGTTTTTTACACTCTTGGTTCTTGTTTCTGTTCTGTTGTGTTGTTTAATTCTCAATTATGGTTATTCTTTTCTGGCTTATTGGTTGGATTTGCAGTTTTGGAT
GGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCAACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGA
TCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATTAACTCCCCAATCTCTGGTGAGATTGTTGAAA
TTAACCCACAGCTTAAGGAAACTCCTGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTAGATTCCTTGCTTGGTCCAAAGGAATATACAAAGTTTTGT
GAGGAAGAAGATGCAGCCCACTAA
Protein sequenceShow/hide protein sequence
MSGRRRRNQSKLNQRKKLWLLECGLLLLLMHSDSHHLKPISLLHSLSPDASLPVVFCSLLLCMQTVCVNASMKFEFVFYTLGSCFCSVVLFNSQLWLFFSGLLVGFAVLD
GLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPGGWMIKVKPSNPAELDSLLGPKEYTKFC
EEEDAAH