; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G000740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionArabinogalactan peptide 22
Genome locationchr05:1475808..1477782
RNA-Seq ExpressionLsi05G000740
SyntenyLsi05G000740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57863.1 hypothetical protein Csa_009896 [Cucumis sativus]4.9e-0576.09Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSS---PAPAPTSD
        MAVLRA CFGIYAA++IAVFYVV LP+S+A++SSS   PAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSS---PAPAPTSD
TYK03143.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa]2.4e-0786.05Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRA CFGIYAAV+IAVFYV+ LPVS+AE+SSSPAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
XP_008465391.1 PREDICTED: arabinogalactan peptide 22 [Cucumis melo]2.0e-0683.72Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRA CFGIYAAV+IAVFYV+ L VS+AE+SSSPAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
XP_022945187.1 arabinogalactan peptide 22-like [Cucurbita moschata]3.4e-0685.71Show/hide
Query:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRACFGIY AVIIA+FYVV LPVS AE +SSPAPAPTSD
Subjt:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]1.1e-0995.24Show/hide
Query:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVL+ACFGIYAAVIIAVFYVVTLPVSAAE SSSPAPAPTSD
Subjt:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
TrEMBL top hitse value%identityAlignment
A0A0A0L7T5 Uncharacterized protein2.4e-0576.09Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSS---PAPAPTSD
        MAVLRA CFGIYAA++IAVFYVV LP+S+A++SSS   PAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSS---PAPAPTSD
A0A1S3CNS5 arabinogalactan peptide 229.6e-0783.72Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRA CFGIYAAV+IAVFYV+ L VS+AE+SSSPAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
A0A5A7U3P4 Arabinogalactan peptide 229.6e-0783.72Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRA CFGIYAAV+IAVFYV+ L VS+AE+SSSPAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
A0A5D3BTZ5 Arabinogalactan peptide 221.1e-0786.05Show/hide
Query:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRA CFGIYAAV+IAVFYV+ LPVS+AE+SSSPAPAPTSD
Subjt:  MAVLRA-CFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
A0A6J1G081 arabinogalactan peptide 22-like1.6e-0685.71Show/hide
Query:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
        MAVLRACFGIY AVIIA+FYVV LPVS AE +SSPAPAPTSD
Subjt:  MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTTGAGAGCTTGTTTTGGAATTTATGCTGCTGTGATTATTGCTGTCTTTTATGTTGTTACTTTGCCTGTATCTGCAGCTGAAATTTCCTCTTCTCCAGCTCC
TGCCCCCACAAGTGATGAGTTGTTGGAATTGAATGTCCACCTTAAATTGGGAAAGTTGACTCCTCATTTGAATAGAAAACAGAACCACAATAGACCAAGGCATAGCATAT
GTTCTAATGCTGGTGGCTTTAGTGCTCACTTATATCATCCATTGATGCAACTTTTGAAAGCACCAAAAAAGCAGAAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTTTGAGAGCTTGTTTTGGAATTTATGCTGCTGTGATTATTGCTGTCTTTTATGTTGTTACTTTGCCTGTATCTGCAGCTGAAATTTCCTCTTCTCCAGCTCC
TGCCCCCACAAGTGATGAGTTGTTGGAATTGAATGTCCACCTTAAATTGGGAAAGTTGACTCCTCATTTGAATAGAAAACAGAACCACAATAGACCAAGGCATAGCATAT
GTTCTAATGCTGGTGGCTTTAGTGCTCACTTATATCATCCATTGATGCAACTTTTGAAAGCACCAAAAAAGCAGAAGAAGAATTAACAGAACATTCAATTCCAATTATGA
ATTGCATTATTTTCAAGTGTATGAGATGAAAGGAAGAGGGTGTGGTTGTTTCATTCAAATGGGTTATTCTATTGCCATTTTTTCTTTTCTTTTTTTTTGAAGATTGGCAG
AGATTTCATTTGTAGAAGGAAAGCCTGTTGTACTTGTATTATAATTTATTTATATTTTTATCATTCTTTTTCTTGAATGATCATTATATTCCTGTGTGTATTCTTATCGT
CCCAAACACCCCCACAAAAAGTTTTTAAAAGATTAACAATGTGGACTAAATTTAAGATTTATTGAAATGTAAGAATTAAAAGTGGACAATTGAAAGTATAAGAGCTAAAG
ACCAAACTTCAATATATAGGGACTCAAAATGGTATTTTAACGTTTATTTTTCTATAAAACTATATATAAACATATTTGACGATAGGATAGAAACACTTAAAACATTTATG
AGGAGAAAAGAAGAATCAAAGGAACTCTATCTTCTTTCTAATAAAAAAGTTAAAAAAAAATGGAAAAAAAAAACTAGAAAGAAGCCATACATATATCCTAATTTATGTAT
AGATGTAGGATAAAAAGCAAGTTTCAAAAACTTTAGATTTATTAAATACAAATTTATGTAGCCTCATGAGATCAGTAAATCTATACTTGTATGCTTAAACATAAACTTAC
TTGGAGTCAAAATGAAGTTAGGGAGTGATTGTCACATGCAAATTAGAAGAAGCATGAATAAGAAGGTAGCTTCTAGCAAAGCCTTTTTAGCCAAAGACTCATAAATGATG
ATACGCTTCAAGGTAATAATGTGCAATATTTTGAAATTGTGCAAGTAAGTGATTGTTATAGTTTCAGACATCAATTTGAAATAATAGGCTAAAGTGAGTTTAACTCAACA
GTAATTGACATGTCTTACTTTCTTAGAAGTTGAAGGTTTGATCAACCCATCTCGTAGTTGTTGTACTAAAAAAAAATTGATAGATTTATGCATTTTTCATATGAAGAAAC
AAACTTCCAAACAAGGAAAATAAGAAATCAAATTACCCATTTTAATCATTTTTGAGTTGATGCGTTGTCCCCATCTGTTAAATTTAGGCATATCACATATGTACCTCAAA
CTCAAAAATAAAAAATAAAAAAATAAATGAAACCCCTCTTTAC
Protein sequenceShow/hide protein sequence
MAVLRACFGIYAAVIIAVFYVVTLPVSAAEISSSPAPAPTSDELLELNVHLKLGKLTPHLNRKQNHNRPRHSICSNAGGFSAHLYHPLMQLLKAPKKQKKN