; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G000830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G000830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyclic nucleotide-gated ion channel 1-like
Genome locationchr05:1559095..1560375
RNA-Seq ExpressionLsi05G000830
SyntenyLsi05G000830
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO99631.1 hypothetical protein CCACVL1_03700 [Corchorus capsularis]1.0e-4142.8Show/hide
Query:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS-----
        RG+ S  + I    K LKSSS N+++ +GF S  K LDPQG FLQ WNKIFVLSC+++VS+ PLFFY+P+I++   CL LD K+ET   +++  +     
Subjt:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS-----

Query:  ------------LPSSRVFGRGVLVEDSSSLATSSL------------------------GQNLTSPCTWENCFSIFV----------------------
                     PSSRVFGRGVLVEDS  +A   L                        G N          F +F                       
Subjt:  ------------LPSSRVFGRGVLVEDSSSLATSSL------------------------GQNLTSPCTWENCFSIFV----------------------

Query:  CISSV----------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        C+  V          EGD VDEMLFIMR KLLTMTTNGGR+GFF S++L AGDFCGEELLTWAL
Subjt:  CISSV----------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

TYK31718.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]6.4e-3664.08Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN AL+RGLAS FDGI       ++ SSN LMPEGFPSEKK LDPQGPFLQSWNK+FVLSCV+SVSL PLFFYVPVID R MCL LD KVETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLATSSL
        +                  PSSRVFGRGVL EDS  +AT  L
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLATSSL

XP_008439333.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]2.4e-3830.17Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN AL+RGLAS FDGI       ++ SSN LMPEGFPSEKK LDPQGPFLQSWNK+FVLSCV+SVSL PLFFYVPVID R MCL LD KVETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------
        +                  PSSRVFGRGVL EDS  +AT                                                             
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------
                           SSLGQNL TSPC WENCF+IFVCIS +                                                      
Subjt:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------

Query:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD
                                                                            EGD VDEMLFIMR KLLTMTTNGGR+ FF SD
Subjt:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD

Query:  FLMAGDFCGEELLTWAL
        FLMAGDFCGEELLTWAL
Subjt:  FLMAGDFCGEELLTWAL

XP_022968618.1 cyclic nucleotide-gated ion channel 1-like [Cucurbita maxima]2.2e-3629.17Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQ--
        MN AL+RGLASS  GI   EK LKSSS N LMPEG  S K+ LDPQGPFLQSWNKIFVLSCVV+VSL PLFFYVPVIDNRN CL LD KVETV CI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQ--

Query:  ---------------DLSLPSSRVFGRGVLVEDSSSLA--------------------------------------------------------------
                           PSSRVFGRGVL+EDS ++A                                                              
Subjt:  ---------------DLSLPSSRVFGRGVLVEDSSSLA--------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------TSSLGQNL-TSPCTWENCFSIFVCISSV--------------------------------------------------
                               S+LGQNL TS C WENCF+I +CIS +                                                  
Subjt:  ----------------------TSSLGQNL-TSPCTWENCFSIFVCISSV--------------------------------------------------

Query:  ------------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGF
                                                                                EGD VDEMLFIMR KLLTMTTNGGR+GF
Subjt:  ------------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGF

Query:  FKSDFLMAGDFCGEELLTWAL
        F SDFLMAGDFCGEELLTW L
Subjt:  FKSDFLMAGDFCGEELLTWAL

XP_038891279.1 LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like [Benincasa hispida]9.9e-4531.14Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN  L++ LASSF G  RTEKLLKSSSSNKL+PEG PSEKK LDPQGPFLQSWNKIFVLSCV+SVSL PLFFYVPVIDNR MCL LD K+ETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------
        +                  PSSRVFGRGVLVEDS ++AT                                                             
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------
                           SSLGQNL TSPCTWENCF+IF+C++ +                                                      
Subjt:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------

Query:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD
                                                                            EGD VDEMLFIMR KLLTMTTNGGR+GFF SD
Subjt:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD

Query:  FLMAGDFCGEELLTWAL
        FLMAGDFCGEELLTWAL
Subjt:  FLMAGDFCGEELLTWAL

TrEMBL top hitse value%identityAlignment
A0A1R3JXV6 Cyclic nucleotide-binding domain-containing protein5.0e-4242.8Show/hide
Query:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS-----
        RG+ S  + I    K LKSSS N+++ +GF S  K LDPQG FLQ WNKIFVLSC+++VS+ PLFFY+P+I++   CL LD K+ET   +++  +     
Subjt:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS-----

Query:  ------------LPSSRVFGRGVLVEDSSSLATSSL------------------------GQNLTSPCTWENCFSIFV----------------------
                     PSSRVFGRGVLVEDS  +A   L                        G N          F +F                       
Subjt:  ------------LPSSRVFGRGVLVEDSSSLATSSL------------------------GQNLTSPCTWENCFSIFV----------------------

Query:  CISSV----------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        C+  V          EGD VDEMLFIMR KLLTMTTNGGR+GFF S++L AGDFCGEELLTWAL
Subjt:  CISSV----------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

A0A1S3AZ77 cyclic nucleotide-gated ion channel 1-like isoform X11.1e-3830.17Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN AL+RGLAS FDGI       ++ SSN LMPEGFPSEKK LDPQGPFLQSWNK+FVLSCV+SVSL PLFFYVPVID R MCL LD KVETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------
        +                  PSSRVFGRGVL EDS  +AT                                                             
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------
                           SSLGQNL TSPC WENCF+IFVCIS +                                                      
Subjt:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------

Query:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD
                                                                            EGD VDEMLFIMR KLLTMTTNGGR+ FF SD
Subjt:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD

Query:  FLMAGDFCGEELLTWAL
        FLMAGDFCGEELLTWAL
Subjt:  FLMAGDFCGEELLTWAL

A0A5A7U8B4 Cyclic nucleotide-gated ion channel 1-like isoform X11.1e-3830.17Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN AL+RGLAS FDGI       ++ SSN LMPEGFPSEKK LDPQGPFLQSWNK+FVLSCV+SVSL PLFFYVPVID R MCL LD KVETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------
        +                  PSSRVFGRGVL EDS  +AT                                                             
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLAT-------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------
                           SSLGQNL TSPC WENCF+IFVCIS +                                                      
Subjt:  -------------------SSLGQNL-TSPCTWENCFSIFVCISSV------------------------------------------------------

Query:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD
                                                                            EGD VDEMLFIMR KLLTMTTNGGR+ FF SD
Subjt:  --------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSD

Query:  FLMAGDFCGEELLTWAL
        FLMAGDFCGEELLTWAL
Subjt:  FLMAGDFCGEELLTWAL

A0A5D3E794 Cyclic nucleotide-gated ion channel 1-like isoform X13.1e-3664.08Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL
        MN AL+RGLAS FDGI       ++ SSN LMPEGFPSEKK LDPQGPFLQSWNK+FVLSCV+SVSL PLFFYVPVID R MCL LD KVETVVCI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL

Query:  S-----------------LPSSRVFGRGVLVEDSSSLATSSL
        +                  PSSRVFGRGVL EDS  +AT  L
Subjt:  S-----------------LPSSRVFGRGVLVEDSSSLATSSL

A0A6J1HXP9 cyclic nucleotide-gated ion channel 1-like1.1e-3629.17Show/hide
Query:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQ--
        MN AL+RGLASS  GI   EK LKSSS N LMPEG  S K+ LDPQGPFLQSWNKIFVLSCVV+VSL PLFFYVPVIDNRN CL LD KVETV CI++  
Subjt:  MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQ--

Query:  ---------------DLSLPSSRVFGRGVLVEDSSSLA--------------------------------------------------------------
                           PSSRVFGRGVL+EDS ++A                                                              
Subjt:  ---------------DLSLPSSRVFGRGVLVEDSSSLA--------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------TSSLGQNL-TSPCTWENCFSIFVCISSV--------------------------------------------------
                               S+LGQNL TS C WENCF+I +CIS +                                                  
Subjt:  ----------------------TSSLGQNL-TSPCTWENCFSIFVCISSV--------------------------------------------------

Query:  ------------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGF
                                                                                EGD VDEMLFIMR KLLTMTTNGGR+GF
Subjt:  ------------------------------------------------------------------------EGDRVDEMLFIMRDKLLTMTTNGGRSGF

Query:  FKSDFLMAGDFCGEELLTWAL
        F SDFLMAGDFCGEELLTW L
Subjt:  FKSDFLMAGDFCGEELLTWAL

SwissProt top hitse value%identityAlignment
O65717 Cyclic nucleotide-gated ion channel 11.7e-2343.57Show/hide
Query:  YRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS----
        YR   SS   I   ++  KS S  + + +G  S  K LDPQGPFLQ WNKIFVL+C+++VSL PLFFYVP+ID+   CL +D+K+E    +++  +    
Subjt:  YRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS----

Query:  -------------LPSSRVFGRGVLVEDSSSLATSSLGQN
                      PSSRVFGRGVLVED   +A   L  +
Subjt:  -------------LPSSRVFGRGVLVEDSSSLATSSLGQN

O65717 Cyclic nucleotide-gated ion channel 11.2e-1681.63Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD VDEMLFIMR KLLT+TTNGGR+GF  S++L AGDFCGEELLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

O82226 Probable cyclic nucleotide-gated ion channel 62.7e-1334.53Show/hide
Query:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFP-SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----
        +G     +G+    + +    S  + PE    SEKK  DPQ  FL   NK+FV SC+++VS+ PLF Y+P I+++  C+ +DRK+  +V  ++ +     
Subjt:  RGLASSFDGIIRTEKLLKSSSSNKLMPEGFP-SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----

Query:  ------------SLPSSRVFGRGVLVEDSSSLATSSLGQ
                      PSSRVFGRG LV D + +A   L Q
Subjt:  ------------SLPSSRVFGRGVLVEDSSSLATSSLGQ

O82226 Probable cyclic nucleotide-gated ion channel 63.0e-1265.31Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V+EMLFI+R +L ++TT+GGRSGF+    L  GDFCG+ELLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

Q9FXH6 Putative cyclic nucleotide-gated ion channel 83.2e-1434.85Show/hide
Query:  GLASSFDGIIRTEKLLKSSSSNKLMPEGF-PSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL------
        G+    +G+    K   S  +  + PE    SEKK  DPQ   L  WN++FV+SC+++VS+ PLFFY+P++DN   C+ +D K+      ++ +      
Subjt:  GLASSFDGIIRTEKLLKSSSSNKLMPEGF-PSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL------

Query:  -----------SLPSSRVFGRGVLVEDSSSLA
                     PSSRVFGRG LV D + +A
Subjt:  -----------SLPSSRVFGRGVLVEDSSSLA

Q9FXH6 Putative cyclic nucleotide-gated ion channel 87.9e-1369.39Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V+EMLFI+R +L ++TT+GGRSGFF    L  GDFCGEELLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

Q9LD40 Putative cyclic nucleotide-gated ion channel 131.2e-1337.14Show/hide
Query:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL
        ++K  ++PQG FLQ+WNKIF+ + V+++++ PLFFY+P++D    CL L R +E    +++                     PSSRVFGRG LV+D  ++
Subjt:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL

Query:  ATSSL
        A   L
Subjt:  ATSSL

Q9LD40 Putative cyclic nucleotide-gated ion channel 131.6e-1367.35Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V+EMLF+MR KL++ TTNGGR+GFF + +L   DFCGE+LLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

Q9LNJ0 Probable cyclic nucleotide-gated ion channel 101.7e-1540Show/hide
Query:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL
        + K  ++PQ  FLQ+WNKIF+ +CVV++++ PLFFY+P++D+   CL LD K+E    +++ L                   PSSRVFGRG LV+D+ ++
Subjt:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL

Query:  ATSSL
        A   L
Subjt:  ATSSL

Q9LNJ0 Probable cyclic nucleotide-gated ion channel 103.0e-1267.35Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V EMLF+MR +L++ TTNGGRSGFF +  L A DFCGE+LL WAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

Arabidopsis top hitse value%identityAlignment
AT1G01340.1 cyclic nucleotide gated channel 101.2e-1640Show/hide
Query:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL
        + K  ++PQ  FLQ+WNKIF+ +CVV++++ PLFFY+P++D+   CL LD K+E    +++ L                   PSSRVFGRG LV+D+ ++
Subjt:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL

Query:  ATSSL
        A   L
Subjt:  ATSSL

AT1G01340.1 cyclic nucleotide gated channel 102.1e-1367.35Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V EMLF+MR +L++ TTNGGRSGFF +  L A DFCGE+LL WAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

AT1G01340.2 cyclic nucleotide gated channel 101.2e-1640Show/hide
Query:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL
        + K  ++PQ  FLQ+WNKIF+ +CVV++++ PLFFY+P++D+   CL LD K+E    +++ L                   PSSRVFGRG LV+D+ ++
Subjt:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL

Query:  ATSSL
        A   L
Subjt:  ATSSL

AT1G01340.2 cyclic nucleotide gated channel 102.1e-1367.35Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V EMLF+MR +L++ TTNGGRSGFF +  L A DFCGE+LL WAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

AT1G19780.1 cyclic nucleotide gated channel 82.3e-1534.85Show/hide
Query:  GLASSFDGIIRTEKLLKSSSSNKLMPEGF-PSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL------
        G+    +G+    K   S  +  + PE    SEKK  DPQ   L  WN++FV+SC+++VS+ PLFFY+P++DN   C+ +D K+      ++ +      
Subjt:  GLASSFDGIIRTEKLLKSSSSNKLMPEGF-PSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL------

Query:  -----------SLPSSRVFGRGVLVEDSSSLA
                     PSSRVFGRG LV D + +A
Subjt:  -----------SLPSSRVFGRGVLVEDSSSLA

AT1G19780.1 cyclic nucleotide gated channel 85.6e-1469.39Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V+EMLFI+R +L ++TT+GGRSGFF    L  GDFCGEELLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

AT4G01010.1 cyclic nucleotide-gated channel 138.7e-1537.14Show/hide
Query:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL
        ++K  ++PQG FLQ+WNKIF+ + V+++++ PLFFY+P++D    CL L R +E    +++                     PSSRVFGRG LV+D  ++
Subjt:  SEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDL-----------------SLPSSRVFGRGVLVEDSSSL

Query:  ATSSL
        A   L
Subjt:  ATSSL

AT4G01010.1 cyclic nucleotide-gated channel 131.1e-1467.35Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD V+EMLF+MR KL++ TTNGGR+GFF + +L   DFCGE+LLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL

AT5G53130.1 cyclic nucleotide gated channel 11.2e-2443.57Show/hide
Query:  YRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS----
        YR   SS   I   ++  KS S  + + +G  S  K LDPQGPFLQ WNKIFVL+C+++VSL PLFFYVP+ID+   CL +D+K+E    +++  +    
Subjt:  YRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLS----

Query:  -------------LPSSRVFGRGVLVEDSSSLATSSLGQN
                      PSSRVFGRGVLVED   +A   L  +
Subjt:  -------------LPSSRVFGRGVLVEDSSSLATSSLGQN

AT5G53130.1 cyclic nucleotide gated channel 18.4e-1881.63Show/hide
Query:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL
        EGD VDEMLFIMR KLLT+TTNGGR+GF  S++L AGDFCGEELLTWAL
Subjt:  EGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCAGCTCTTTACAGAGGGTTGGCTTCTAGTTTTGATGGAATTATAAGAACTGAGAAGCTACTGAAATCTTCTTCTTCTAATAAACTCATGCCTGAAGGCTTTCC
CTCAGAGAAGAAAAGTCTTGATCCACAAGGGCCATTTCTCCAAAGTTGGAACAAGATATTTGTGCTGTCTTGTGTGGTTTCTGTTTCGTTGGTTCCTTTGTTCTTCTATG
TTCCTGTGATTGATAATAGAAATATGTGTCTTTGGTTAGATAGGAAAGTGGAGACTGTAGTCTGTATAGTACAGGATTTATCGCTCCCCTCTTCACGAGTATTCGGAAGA
GGTGTTTTAGTAGAAGATTCCTCGTCATTAGCAACGAGCTCTTTGGGGCAAAATCTTACAAGTCCTTGCACATGGGAAAACTGCTTTTCCATTTTCGTTTGCATCTCTAG
TGTAGAAGGCGATCGAGTCGATGAAATGCTCTTCATCATGAGAGACAAGCTCTTAACCATGACTACAAATGGTGGGAGAAGTGGATTCTTCAAGTCTGATTTCCTCATGG
CTGGTGATTTCTGTGGAGAAGAGCTACTGACTTGGGCTCTAGCTGAGCCTGATTTTTACCATGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCAGCTCTTTACAGAGGGTTGGCTTCTAGTTTTGATGGAATTATAAGAACTGAGAAGCTACTGAAATCTTCTTCTTCTAATAAACTCATGCCTGAAGGCTTTCC
CTCAGAGAAGAAAAGTCTTGATCCACAAGGGCCATTTCTCCAAAGTTGGAACAAGATATTTGTGCTGTCTTGTGTGGTTTCTGTTTCGTTGGTTCCTTTGTTCTTCTATG
TTCCTGTGATTGATAATAGAAATATGTGTCTTTGGTTAGATAGGAAAGTGGAGACTGTAGTCTGTATAGTACAGGATTTATCGCTCCCCTCTTCACGAGTATTCGGAAGA
GGTGTTTTAGTAGAAGATTCCTCGTCATTAGCAACGAGCTCTTTGGGGCAAAATCTTACAAGTCCTTGCACATGGGAAAACTGCTTTTCCATTTTCGTTTGCATCTCTAG
TGTAGAAGGCGATCGAGTCGATGAAATGCTCTTCATCATGAGAGACAAGCTCTTAACCATGACTACAAATGGTGGGAGAAGTGGATTCTTCAAGTCTGATTTCCTCATGG
CTGGTGATTTCTGTGGAGAAGAGCTACTGACTTGGGCTCTAGCTGAGCCTGATTTTTACCATGAAAGATAA
Protein sequenceShow/hide protein sequence
MNPALYRGLASSFDGIIRTEKLLKSSSSNKLMPEGFPSEKKSLDPQGPFLQSWNKIFVLSCVVSVSLVPLFFYVPVIDNRNMCLWLDRKVETVVCIVQDLSLPSSRVFGR
GVLVEDSSSLATSSLGQNLTSPCTWENCFSIFVCISSVEGDRVDEMLFIMRDKLLTMTTNGGRSGFFKSDFLMAGDFCGEELLTWALAEPDFYHER