; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G001070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:1816879..1817999
RNA-Seq ExpressionLsi05G001070
SyntenyLsi05G001070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57663.1 hypothetical protein Csa_011496 [Cucumis sativus]5.9e-1845.4Show/hide
Query:  RKKFKQSISSGPTEGFLTELLHHFVYELKEMGFGGYFD-------------LGYYCFSFVDCVYCCYCALLATLLFFCFKSLHLVVTNSQKTLCLLYQRV
        +KK KQSISSGPT+GFLTELLH+FVYELK + F   ++             +G +   FV  VYCC+CALLATLLF                        
Subjt:  RKKFKQSISSGPTEGFLTELLHHFVYELKEMGFGGYFD-------------LGYYCFSFVDCVYCCYCALLATLLFFCFKSLHLVVTNSQKTLCLLYQRV

Query:  LTCDKENWRRLGWGRWKRGKAIWLLHALQTQAHVKATLLLAFHGLVDNLIALIHLAYYNFMIL
         +  KE     G G   +G+        QTQAHVKA ++L FHGLVD LIA IHLAYYN  IL
Subjt:  LTCDKENWRRLGWGRWKRGKAIWLLHALQTQAHVKATLLLAFHGLVDNLIALIHLAYYNFMIL
TrEMBL top hitse value%identityAlignment
A0A0A0L7A5 Uncharacterized protein2.9e-1845.4Show/hide
Query:  RKKFKQSISSGPTEGFLTELLHHFVYELKEMGFGGYFD-------------LGYYCFSFVDCVYCCYCALLATLLFFCFKSLHLVVTNSQKTLCLLYQRV
        +KK KQSISSGPT+GFLTELLH+FVYELK + F   ++             +G +   FV  VYCC+CALLATLLF                        
Subjt:  RKKFKQSISSGPTEGFLTELLHHFVYELKEMGFGGYFD-------------LGYYCFSFVDCVYCCYCALLATLLFFCFKSLHLVVTNSQKTLCLLYQRV

Query:  LTCDKENWRRLGWGRWKRGKAIWLLHALQTQAHVKATLLLAFHGLVDNLIALIHLAYYNFMIL
         +  KE     G G   +G+        QTQAHVKA ++L FHGLVD LIA IHLAYYN  IL
Subjt:  LTCDKENWRRLGWGRWKRGKAIWLLHALQTQAHVKATLLLAFHGLVDNLIALIHLAYYNFMIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGAACCCAAGGAAGAAATTCAAGCAGTCAATTTCCTCTGGACCCACCGAGGGCTTCTTGACTGAGTTGCTCCATCATTTTGTCTATGAACTGAAAGAAATGGG
TTTTGGTGGTTACTTTGATTTGGGTTATTATTGTTTCTCCTTTGTTGATTGTGTTTACTGCTGCTACTGTGCATTGCTAGCAACCCTTTTGTTTTTCTGTTTCAAAAGTT
TACATTTAGTAGTCACTAATAGCCAGAAAACCTTGTGTTTGCTTTATCAGCGAGTCCTGACCTGTGATAAAGAAAATTGGAGGAGATTGGGTTGGGGGAGATGGAAAAGA
GGAAAAGCAATTTGGCTTCTACATGCTCTTCAGACTCAGGCACATGTAAAAGCAACCCTGCTTTTGGCATTTCATGGTTTGGTTGATAACCTTATAGCCTTGATCCATCT
TGCATATTACAATTTTATGATTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGAACCCAAGGAAGAAATTCAAGCAGTCAATTTCCTCTGGACCCACCGAGGGCTTCTTGACTGAGTTGCTCCATCATTTTGTCTATGAACTGAAAGAAATGGG
TTTTGGTGGTTACTTTGATTTGGGTTATTATTGTTTCTCCTTTGTTGATTGTGTTTACTGCTGCTACTGTGCATTGCTAGCAACCCTTTTGTTTTTCTGTTTCAAAAGTT
TACATTTAGTAGTCACTAATAGCCAGAAAACCTTGTGTTTGCTTTATCAGCGAGTCCTGACCTGTGATAAAGAAAATTGGAGGAGATTGGGTTGGGGGAGATGGAAAAGA
GGAAAAGCAATTTGGCTTCTACATGCTCTTCAGACTCAGGCACATGTAAAAGCAACCCTGCTTTTGGCATTTCATGGTTTGGTTGATAACCTTATAGCCTTGATCCATCT
TGCATATTACAATTTTATGATTTTGTGA
Protein sequenceShow/hide protein sequence
MRSNPRKKFKQSISSGPTEGFLTELLHHFVYELKEMGFGGYFDLGYYCFSFVDCVYCCYCALLATLLFFCFKSLHLVVTNSQKTLCLLYQRVLTCDKENWRRLGWGRWKR
GKAIWLLHALQTQAHVKATLLLAFHGLVDNLIALIHLAYYNFMIL