; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G001110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L9, chloroplastic
Genome locationchr05:1840096..1842233
RNA-Seq ExpressionLsi05G001110
SyntenyLsi05G001110
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000244 - Ribosomal protein L9
IPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR020069 - Ribosomal protein L9, C-terminal
IPR020070 - Ribosomal protein L9, N-terminal
IPR036791 - Ribosomal protein L9, C-terminal domain superfamily
IPR036935 - Ribosomal protein L9, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574247.1 hypothetical protein SDJN03_28134, partial [Cucurbita argyrosperma subsp. sororia]3.3e-10893.58Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PENL+LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYW+LKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

XP_022944820.1 uncharacterized protein LOC111449243 [Cucurbita moschata]4.4e-10893.12Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYL+KEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PENL+LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYW+LKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

XP_022968164.1 uncharacterized protein LOC111467481 [Cucurbita maxima]1.2e-10894.04Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PENL+LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYWTLKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

XP_023541498.1 uncharacterized protein LOC111801661 [Cucurbita pepo subsp. pepo]9.7e-10893.12Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PEN++LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYW+LKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

XP_038895552.1 50S ribosomal protein L9 [Benincasa hispida]4.2e-11196.33Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYGRNAL+QIIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPG+FRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPV+E
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYE+PLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYWTLKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

TrEMBL top hitse value%identityAlignment
A0A0A0LAH8 50S ribosomal protein L9, chloroplastic4.7e-10891.52Show/hide
Query:  TRRKIRMACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRI
        T  KIRMACIQY RNAL+ IIK+T+LHPSDQMMQPLLFS QGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPK+LAVPNI+KYAYLIKEQRRI
Subjt:  TRRKIRMACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRI

Query:  YQPVEEEVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPL
        YQPVEEEVVKVVT+TKE+KMKEYEKAA+RLDS QLVLRRLIDKEKFRTRA KDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNL SPLS CGEYEVPL
Subjt:  YQPVEEEVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPL

Query:  RFPKSIPLPEGKIYWTLKVKVRSK
        RFPKSIPLPEGK+YWTLKVKVRSK
Subjt:  RFPKSIPLPEGKIYWTLKVKVRSK

A0A1S3C248 50S ribosomal protein L9, chloroplastic2.6e-10692.2Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYGRNAL++IIK+T LHPSDQMMQPLLF+ QGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPK+LAVPNI+KYA+LIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVT+TKE+KMKEYEKAAKRLD  QLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLS CGEYEV LRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGK+YWTLKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

A0A6J1CID3 50S ribosomal protein L9, chloroplastic6.8e-10792.66Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MAC+QYGRNAL+QIIK+TRLH SDQM+QPLLF SQGVRHRKLEVILTTSIEKLG AGETVKVAPG+FRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        E+VKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFR RATKDEPLALQSSVTVDD+VAEVARQ SVQI PENL+LPSPLSTCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYW LKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

A0A6J1FZ52 50S ribosomal protein L9, chloroplastic2.1e-10893.12Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYL+KEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PENL+LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYW+LKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

A0A6J1HYV2 50S ribosomal protein L9, chloroplastic5.6e-10994.04Show/hide
Query:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
        MACIQYG+NALQ+IIK+TRLHPSD+MMQPLLFSSQGVRHRKLEVILTTSIEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE
Subjt:  MACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEE

Query:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        EVVKVVTVTKE+KMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDD+VAEVARQ S+QI PENL+LP+PL TCGEYEVPLRFPKSI
Subjt:  EVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Query:  PLPEGKIYWTLKVKVRSK
        PLPEGKIYWTLKVKVRSK
Subjt:  PLPEGKIYWTLKVKVRSK

SwissProt top hitse value%identityAlignment
A7H6J2 50S ribosomal protein L92.8e-0932.02Show/hide
Query:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF
        +++IL   +E LG  GE V V PGY RN L+P+ LAV    K    ++ Q            K +   K  KMK   +A AKRL  T + L R + ++  
Subjt:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF

Query:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK
                   L  SVT  D VAE      +QI    ++L  P+ T G++EVP++    +    GK+    KVKV ++
Subjt:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVKVRSK

B4ULB9 50S ribosomal protein L91.7e-0931.03Show/hide
Query:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF
        +++IL   +E LG  G+ V V PGY RN L+P+ LAV    K    ++ Q            K V   K  K+K   +A AKRL  T + L+R + ++  
Subjt:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF

Query:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK
                   L  SVT  D VAE      VQ+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Subjt:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK

B8J801 50S ribosomal protein L91.7e-0931.03Show/hide
Query:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF
        +++IL   +E LG  G+ V V PGY RN L+P+ LAV    K    ++ Q            K V   K  K+K   +A AKRL  T + L+R + ++  
Subjt:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF

Query:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK
                   L  SVT  D VAE      VQ+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Subjt:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK

Q01QR6 50S ribosomal protein L92.8e-0931.25Show/hide
Query:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMK-EYEKAAKRLDSTQLVLRRLIDKEKF
        +EVIL   IE LG  G+ VKVAPGY RN L+PK +AV   +    +++++R+ +            + KE K+K E E+ AK +    +           
Subjt:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMK-EYEKAAKRLDSTQLVLRRLIDKEKF

Query:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI
        R      E   L  SVT  DI   +  Q +  I    + L  P+ T GE+++P+R  K +
Subjt:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSI

Q2IM65 50S ribosomal protein L97.5e-1031.03Show/hide
Query:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF
        +++IL   +E LG  G+ V V PGY RN+L+P+ LAV    K    ++ Q            K V   K  K+K   +A AKRL  T + L+R + ++  
Subjt:  LEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKA-AKRLDSTQLVLRRLIDKEKF

Query:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK
                   L  SVT  D VAE      VQ+   ++ L  P+ T GE+EVP++    +    GK+  T++ +
Subjt:  RTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFPKSIPLPEGKIYWTLKVK

Arabidopsis top hitse value%identityAlignment
AT5G53070.1 Ribosomal protein L9/RNase H13.6e-6861.64Show/hide
Query:  MACIQYGRNALQQII-KNTRLHPSDQMM-QPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPV
        MA +   RN ++ ++ + T  H  +  +  PLLF+ QGVR+RKLEVILTT IEKLG AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLI+EQR++Y   
Subjt:  MACIQYGRNALQQII-KNTRLHPSDQMM-QPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPV

Query:  E-EEVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFP
        E +E VKVV  T E + KEYEKAAKRL +  LVLR+L+DKEKF+ R++KD+   +Q+ +T ++IV+EVARQ  V+I P+N+ L +PL T GEYEVPL+FP
Subjt:  E-EEVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPLRFP

Query:  KSIPLPEGKIYWTLKVKVR
        K+IPLP+G + W LKVKVR
Subjt:  KSIPLPEGKIYWTLKVKVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCATATTGTATAATTTTTCCAGATATATTTCCAGATATATGGCACACATTTGAAACTCGTCGTAAGATCCGAATGGCTTGCATACAGTATGGTAGAAATGCACT
CCAGCAAATTATAAAAAATACTAGGCTTCATCCTTCTGATCAAATGATGCAGCCATTGTTATTCTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAA
CAAGCATTGAAAAGCTTGGGAACGCCGGAGAGACAGTTAAGGTTGCCCCTGGATACTTTCGTAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTAT
GCTTATCTGATCAAGGAGCAACGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTCGTGACAGTGACGAAGGAGGAGAAGATGAAAGAATATGAAAAGGCAGC
AAAACGTCTGGATAGTACTCAGCTGGTGTTGAGGAGGTTAATTGACAAGGAAAAGTTTCGTACTCGTGCTACAAAAGATGAGCCCTTAGCTTTGCAATCTTCTGTGACAG
TAGACGACATTGTTGCTGAGGTGGCACGACAATTTTCTGTTCAAATTGCACCCGAAAATCTAAACTTACCATCCCCCTTGTCAACATGTGGTGAATATGAAGTACCGCTC
CGCTTTCCAAAGTCGATCCCCTTGCCTGAAGGAAAGATCTACTGGACTCTCAAGGTGAAAGTCCGTAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCATATTGTATAATTTTTCCAGATATATTTCCAGATATATGGCACACATTTGAAACTCGTCGTAAGATCCGAATGGCTTGCATACAGTATGGTAGAAATGCACT
CCAGCAAATTATAAAAAATACTAGGCTTCATCCTTCTGATCAAATGATGCAGCCATTGTTATTCTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAA
CAAGCATTGAAAAGCTTGGGAACGCCGGAGAGACAGTTAAGGTTGCCCCTGGATACTTTCGTAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTAT
GCTTATCTGATCAAGGAGCAACGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTCGTGACAGTGACGAAGGAGGAGAAGATGAAAGAATATGAAAAGGCAGC
AAAACGTCTGGATAGTACTCAGCTGGTGTTGAGGAGGTTAATTGACAAGGAAAAGTTTCGTACTCGTGCTACAAAAGATGAGCCCTTAGCTTTGCAATCTTCTGTGACAG
TAGACGACATTGTTGCTGAGGTGGCACGACAATTTTCTGTTCAAATTGCACCCGAAAATCTAAACTTACCATCCCCCTTGTCAACATGTGGTGAATATGAAGTACCGCTC
CGCTTTCCAAAGTCGATCCCCTTGCCTGAAGGAAAGATCTACTGGACTCTCAAGGTGAAAGTCCGTAGTAAATAAAAAGTGGGAAACACTTGCTCTCGCTTTATGGTGCC
TCTGGTTTGAGTTTCTTTAGATCGCTAGTCCTTTAGTTATTATGTTGGCTGTTTGTTGGTTCCTCAATGATTGAATTGAAGCTATTTGCTTAACAATATAATGAATTCAC
ACTGTGAAACAAATGAATCAACGTGAGATTTTGTGCGTTCTTGAATTAA
Protein sequenceShow/hide protein sequence
MRSYCIIFPDIFPDIWHTFETRRKIRMACIQYGRNALQQIIKNTRLHPSDQMMQPLLFSSQGVRHRKLEVILTTSIEKLGNAGETVKVAPGYFRNHLMPKLLAVPNIDKY
AYLIKEQRRIYQPVEEEVVKVVTVTKEEKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDIVAEVARQFSVQIAPENLNLPSPLSTCGEYEVPL
RFPKSIPLPEGKIYWTLKVKVRSK