; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G001160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthylakoid lumenal 17.4 kDa protein, chloroplastic
Genome locationchr05:1874022..1877038
RNA-Seq ExpressionLsi05G001160
SyntenyLsi05G001160
Gene Ontology termsNA
InterPro domainsIPR001646 - Pentapeptide repeat
IPR044195 - Pentapeptide repeat containing protein TL17-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576642.1 Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.4e-11686.4Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSRRFFSAK P +  PF HSL  I+CSA R+GAEPRE LSPCKHI +VACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_008455988.1 PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]5.3e-12591.6Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATRDGA+PRENLSPCKHISTVACGLLAVW LTNTSPVIAANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_011651313.1 thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus]7.1e-12289.2Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_022984509.1 thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]1.3e-11888Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSRRFFSAK P II PF HSL RI+CSA RDGAEPRE+LSPC HI +VACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_038885483.1 thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida]1.2e-12492Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATR+GAEPRENL PCKHISTVACGLLAVWTL NTSPVIAA+QRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNF KANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFD+AQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

TrEMBL top hitse value%identityAlignment
A0A0A0LC74 Uncharacterized protein3.4e-12289.2Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A1S3C2V7 thylakoid lumenal 17.4 kDa protein, chloroplastic2.5e-12591.6Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATRDGA+PRENLSPCKHISTVACGLLAVW LTNTSPVIAANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1E548 thylakoid lumenal 17.4 kDa protein, chloroplastic-like2.8e-11686Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSRRFFSAK P +  PF HSL  I+CSA RDGA PRE+LSPC HI +VACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1G0I9 thylakoid lumenal 17.4 kDa protein, chloroplastic6.3e-11686.4Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MA LSIPLSQNGFSR F+SAKRPQ+I P   SL  ITC A  DGAEP+E+LSPCKHI TVACGLLAVWTLTNT+PVIAA QRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTN+K+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1JAQ7 thylakoid lumenal 17.4 kDa protein, chloroplastic-like6.1e-11988Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN
        MATLSIP SQNGFSRRFFSAK P II PF HSL RI+CSA RDGAEPRE+LSPC HI +VACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGN
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF
        TIGQANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDFSNAVLDRVNFGKANLQGA+F
Subjt:  TIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVF

Query:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  KNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

SwissProt top hitse value%identityAlignment
P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic1.6e-7961.26Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAF
        MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K + ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AF
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAF

Query:  VGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQG
        VGNTIGQANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             GV+F+NAV+DRVNFGK+NL+G
Subjt:  VGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQG

Query:  AVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        AVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  AVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

P81778 Thylakoid lumenal 17.4 kDa protein (Fragment)2.2e-0486.96Show/hide
Query:  ANQRLPPLSTEPNRCERAFVGNT
        ANQRLPPLS +P+RCERAFVGNT
Subjt:  ANQRLPPLSTEPNRCERAFVGNT

Q8H1Q1 Thylakoid lumenal protein TL20.3, chloroplastic1.1e-0828.49Show/hide
Query:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI
        VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G+  +   + KA A  A+F             
Subjt:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI

Query:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
         G D S+ ++DR+   +ANL  AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

Arabidopsis top hitse value%identityAlignment
AT1G12250.1 Pentapeptide repeat-containing protein7.8e-1028.49Show/hide
Query:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI
        VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G+  +   + KA A  A+F             
Subjt:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI

Query:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
         G D S+ ++DR+   +ANL  AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

AT1G12250.2 Pentapeptide repeat-containing protein7.8e-1028.49Show/hide
Query:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI
        VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A M E+ F G+  +   + KA A  A+F             
Subjt:  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPI

Query:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
         G D S+ ++DR+   +ANL  AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  GGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

AT5G53490.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-8061.26Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAF
        MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K + ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AF
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAF

Query:  VGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQG
        VGNTIGQANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             GV+F+NAV+DRVNFGK+NL+G
Subjt:  VGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQG

Query:  AVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        AVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  AVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

AT5G53490.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-8061.11Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA--TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFV
        MA+L +  ++N  S  FFS      +   P SL  + CS     +G   +++L P K + ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFV
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA--TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFV

Query:  GNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGA
        GNTIGQANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             GV+F+NAV+DRVNFGK+NL+GA
Subjt:  GNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGA

Query:  VFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        VF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  VFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

AT5G53490.3 Tetratricopeptide repeat (TPR)-like superfamily protein4.7e-7958.05Show/hide
Query:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA-----------------TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRL
        MA+L +  ++N  S  FFS      +   P SL  + CSA                   +G   +++L P K + ++AC  L   TLT  SPVIAANQRL
Subjt:  MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA-----------------TRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRL

Query:  PPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNA
        PPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             GV+F+NA
Subjt:  PPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNA

Query:  VLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        V+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  VLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCAC
CTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCT
CTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGAT
AAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGAAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCT
CTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAG
TTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTT
GAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAA
mRNA sequenceShow/hide mRNA sequence
AGCATCTTCGAACGGATAAGTCAGGCAAGAGTGAGGGAGCCGGAGAGAATTCATTTTTTTTTTCTTTCAAATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCT
CTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAAT
TTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTC
GACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAA
AAAATCAGTTAAAAGGAAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCC
AGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGG
AGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTT
GTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAATTTCAATATAGTTTCAATACTTTCACTATATGTATTGTATAATCAACTTGATTATTT
TTGTAGGTAATAAATATTCAAAAGAGAGAACTCCCTCTTAACTCCTGTTGAACCACCATGTGCTGCTTTCTATTTTCCATAAGGTTCTTTTGTTATTTCATTTAAG
Protein sequenceShow/hide protein sequence
MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYD
KPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVF
EDTIIGYIDLQKLCVNPTISPEGRAELGCR