; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G001170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionexonuclease mut-7 homolog
Genome locationchr05:1877034..1880100
RNA-Seq ExpressionLsi05G001170
SyntenyLsi05G001170
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR002562 - 3'-5' exonuclease domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11277.1 exonuclease mut-7-like protein [Cucumis melo var. makuwa]2.1e-10081.97Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS N  P+FEIH+VSSIDSPEF  LTHTLT SHLIALDAEWKPL+TPDQ  SFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF
        +VLKLGFRFKQDLVYLSTTF S+ GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSLAAIC+E+LGFSLSK               ELQCSDWS 
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF

Query:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

XP_004146233.1 exonuclease mut-7 homolog [Cucumis sativus]3.5e-10382.91Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS   RP+FEIH+VSSIDSPEF  LTHTLTRSHLIALDAEWKPL+TPDQHSSFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH--GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWS
        +VLKLGFRFKQDLVYLSTTF S+  GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSL AIC+EVLGFSLSK               ELQCSDWS
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH--GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWS

Query:  FRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
         RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  FRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

XP_008455993.1 PREDICTED: exonuclease mut-7 homolog [Cucumis melo]1.3e-10282.83Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS N  P+FEIH+VSSIDSPEF  LTHTLT SHLIALDAEWKPL+TPDQ SSFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF
        +VLKLGFRFKQDLVYLSTTF S+ GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSLAAIC+EVLGFSLSK               ELQCSDWS 
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF

Query:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

XP_022923062.1 exonuclease mut-7 homolog [Cucurbita moschata]1.2e-10081.36Show/hide
Query:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV
        M LLMD  NGRPSFEIHIVSS+ SP+F QLT TLTRS LIALDAEWKPLR+P+ HSSFPRVSLLQIACQFH D  NDSVVFLLDLLS+PLSSV DLLRDV
Subjt:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV

Query:  FVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSD
        FVSPHVLKLGFRFKQDLV LSTTFCS+GG+SGLDRIEPFMDITSIYNHL HKQ GRK+HKQ KSLAAIC+EVL FSLSK               ELQCSD
Subjt:  FVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSD

Query:  WSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        WS+RPLTEEQIAYAAMDAHCLLEIFN+F SKVLKEG
Subjt:  WSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

XP_038895816.1 exonuclease mut-7 homolog isoform X1 [Benincasa hispida]1.6e-10887.23Show/hide
Query:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV
        M LLMDSQN RPSFEIHIVSSIDSPEF QLTH LTRS LIALDAEWKPLRTPDQHSSFPRVSLLQIACQF+S+HRNDSVVFLLDLLSVPLSSVWDLLRDV
Subjt:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV

Query:  FVSPHVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCS
        FVSPHVLKLGFRFKQDLVYLSTTF S+ GGLSGLDRIEPFMDITSIYNHLQ+KQ GRKLHKQ+KSLAAIC+EVLGFSLSK               ELQCS
Subjt:  FVSPHVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCS

Query:  DWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLK
        DWSFRPLTEEQIAYAAMDAHCLLEIFNVF SKVLK
Subjt:  DWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q0 3'-5' exonuclease domain-containing protein1.7e-10382.91Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS   RP+FEIH+VSSIDSPEF  LTHTLTRSHLIALDAEWKPL+TPDQHSSFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH--GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWS
        +VLKLGFRFKQDLVYLSTTF S+  GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSL AIC+EVLGFSLSK               ELQCSDWS
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH--GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWS

Query:  FRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
         RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  FRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

A0A1S3C2A3 exonuclease mut-7 homolog6.4e-10382.83Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS N  P+FEIH+VSSIDSPEF  LTHTLT SHLIALDAEWKPL+TPDQ SSFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF
        +VLKLGFRFKQDLVYLSTTF S+ GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSLAAIC+EVLGFSLSK               ELQCSDWS 
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF

Query:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

A0A5A7U5M5 Exonuclease mut-7-like protein6.4e-10382.83Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS N  P+FEIH+VSSIDSPEF  LTHTLT SHLIALDAEWKPL+TPDQ SSFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF
        +VLKLGFRFKQDLVYLSTTF S+ GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSLAAIC+EVLGFSLSK               ELQCSDWS 
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF

Query:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

A0A5D3CH52 Exonuclease mut-7-like protein1.0e-10081.97Show/hide
Query:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP
        MDS N  P+FEIH+VSSIDSPEF  LTHTLT SHLIALDAEWKPL+TPDQ  SFPRVSLLQIACQFHSDHRNDSV FLLDLLSVPLSS+W LLRDVFVSP
Subjt:  MDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSP

Query:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF
        +VLKLGFRFKQDLVYLSTTF S+ GG+SGLDRIEPFMDI SIY HLQHKQ GRKLHKQ+KSLAAIC+E+LGFSLSK               ELQCSDWS 
Subjt:  HVLKLGFRFKQDLVYLSTTFCSH-GGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSF

Query:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        RPLTEEQIAYAAMDAHCLLEIFNVF SKVLKEG
Subjt:  RPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

A0A6J1E542 exonuclease mut-7 homolog6.0e-10181.36Show/hide
Query:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV
        M LLMD  NGRPSFEIHIVSS+ SP+F QLT TLTRS LIALDAEWKPLR+P+ HSSFPRVSLLQIACQFH D  NDSVVFLLDLLS+PLSSV DLLRDV
Subjt:  MCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDV

Query:  FVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSD
        FVSPHVLKLGFRFKQDLV LSTTFCS+GG+SGLDRIEPFMDITSIYNHL HKQ GRK+HKQ KSLAAIC+EVL FSLSK               ELQCSD
Subjt:  FVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSD

Query:  WSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG
        WS+RPLTEEQIAYAAMDAHCLLEIFN+F SKVLKEG
Subjt:  WSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEG

SwissProt top hitse value%identityAlignment
A9LLI8 Protein RRP6-like 37.5e-0827.14Show/hide
Query:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC
        +  +L   L +  + A+D E   LR     S     +L+QI     S H  D   FL+D  ++ L  V  +LR VF  P++ K+      D+++L   F 
Subjt:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC

Query:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEI
         +                 + N     +    L K  +SLA +   V G + +K+               LQ  DW  RPL+EE + YA  DAH LL I
Subjt:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEI

P34607 Exonuclease mut-71.4e-0624.75Show/hide
Query:  IALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWD-----LLRDVFVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLD
        +  D+EWKP      H S  +++++Q+  +        + V+L+D + +  +++ D         +F    V  +GF  + DL  ++T       +   D
Subjt:  IALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWD-----LLRDVFVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLD

Query:  RIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKV
            F       N         +L K+T  LA + + +LG  L K                 QCS+W  RPL ++QI YAA+DA  ++E F    S V
Subjt:  RIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKV

Q179T2 Exonuclease mut-7 homolog2.2e-1228.24Show/hide
Query:  IHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSV-W-DLLRDVFVSPHVLKLGFRF
        +H+V S D  +F  +   L R  +IA D+EWKP            VSL+Q+A            V+++D++   L  + W  L ++VF    VLKL F  
Subjt:  IHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSV-W-DLLRDVFVSPHVLKLGFRF

Query:  KQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGR-KLHKQT--KSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQ
          D+        S   +         +D+  ++ H++   + R   H+++  ++LA +    LG  L K                 Q S+W+ RPL +EQ
Subjt:  KQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGR-KLHKQT--KSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQ

Query:  IAYAAMDAHCLLEIFN
        + YAA+DA CLLEI++
Subjt:  IAYAAMDAHCLLEIFN

Q8N9H8 Exonuclease mut-7 homolog5.0e-1226.78Show/hide
Query:  PSFEIHIVSSIDSPEFNQLTHTLTRSH-LIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVP-------LSSVWDLLRDVFVS
        P   +H+++S +  +  +    L + H ++ +D EW P+         PR SLLQ+A + H        VFLLD+L++          +   L+  +   
Subjt:  PSFEIHIVSSIDSPEFNQLTHTLTRSH-LIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVP-------LSSVWDLLRDVFVS

Query:  PHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDR-IEPFMDITSIYNHLQHKQ---NGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCS
        P + KLG+    DL  L T   S   L+ +++ I   MD+  ++  ++            ++ + L+ +  +VLG +L K                 Q S
Subjt:  PHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDR-IEPFMDITSIYNHLQHKQ---NGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCS

Query:  DWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEGLS
        +W  RPL EEQ+ YAA DA+CLLE+    C +  +  LS
Subjt:  DWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEGLS

Q9VIF1 Exonuclease mut-7 homolog2.1e-1028.22Show/hide
Query:  DMCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVP--LSSVWDLL
        DM L MD     P   + IV+  D  EF+++ + L +  +I LD+EW      D      ++ +LQIA    + H     V+L+D L+     S  W LL
Subjt:  DMCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVP--LSSVWDLL

Query:  -RDVFVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKL-----HKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQ
          ++F + ++ K+GF    DL  L  +         L     ++D+ +++  L+ ++ G +L     ++   +L  +    LG  L+K            
Subjt:  -RDVFVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKL-----HKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQ

Query:  FSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKV
             QCS+W+ RPL  EQI YAA+DA CL+ I+N    +V
Subjt:  FSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIFNVFCSKV

Arabidopsis top hitse value%identityAlignment
AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-1428.57Show/hide
Query:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSV--PLSSVWD-LLRDVFVSPHVLKLGFRFKQDLVYLST
        E  + T  L    ++ +D EWKP     + S   +VS++QI         +D+ +F+LDL+ +    S + D  L  +  S   LKLG+ F+ D+  L+ 
Subjt:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSV--PLSSVWD-LLRDVFVSPHVLKLGFRFKQDLVYLST

Query:  TFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLL
           S+G L   +R +  +DI +++N            +    LA +  ++LG SL+K                 + SDW  RPL++ Q+ YAA+DA  L+
Subjt:  TFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLL

Query:  EIF
         IF
Subjt:  EIF

AT2G32415.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain4.8e-1026.03Show/hide
Query:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC
        +  +L   L +  + A+D E   LR     S     +L+QI     S H  D   FL+D  ++ L  V  +LR VF  P++ K+      D+++L   F 
Subjt:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC

Query:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIF
         +                 + N     +    L K  +SLA +   V G + +K+               LQ  DW  RPL+EE + YA  DAH LL I 
Subjt:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIF

Query:  NVFCSKVLKEGLSVSEPWD
        +   +++ +     S P D
Subjt:  NVFCSKVLKEGLSVSEPWD

AT2G32415.2 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain4.8e-1026.03Show/hide
Query:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC
        +  +L   L +  + A+D E   LR     S     +L+QI     S H  D   FL+D  ++ L  V  +LR VF  P++ K+      D+++L   F 
Subjt:  EFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGFRFKQDLVYLSTTFC

Query:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIF
         +                 + N     +    L K  +SLA +   V G + +K+               LQ  DW  RPL+EE + YA  DAH LL I 
Subjt:  SHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQIAYAAMDAHCLLEIF

Query:  NVFCSKVLKEGLSVSEPWD
        +   +++ +     S P D
Subjt:  NVFCSKVLKEGLSVSEPWD

AT5G24340.1 3'-5' exonuclease domain-containing protein1.5e-6457.39Show/hide
Query:  SFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRND-SVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGF
        + +I++VSS DS EF  L  + TRS +IALDAEWKP  +    SSFP V+LLQ+AC+    H  D S VFL+DL S+ L SVW+LL D+FVSP VLKLGF
Subjt:  SFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRND-SVVFLLDLLSVPLSSVWDLLRDVFVSPHVLKLGF

Query:  RFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQI
        RFKQDLVYLS+TF  HG   G   ++ ++DITSIYN+LQHK+ GRK  K  KSLAAIC E+L  SLSK               ELQCSDWS+RPLTEEQ 
Subjt:  RFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFRPLTEEQI

Query:  AYAAMDAHCLLEIFNVFCSKVLKEGLSVSE
         YAA DAHCLL+IF+VF    L EG++V +
Subjt:  AYAAMDAHCLLEIFNVFCSKVLKEGLSVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCGGATGATCTTGATCACGTGGCAGTACACGTAGATTATGACATGTGTCTTCTTATGGATTCCCAGAACGGCCGGCCTTCCTTTGAAATCCACATTGTTTCTTC
TATCGACTCTCCCGAGTTCAATCAGCTAACTCACACACTGACTCGCTCTCACCTTATTGCCCTCGACGCCGAGTGGAAGCCCCTTCGAACTCCTGATCAACATTCTTCAT
TCCCCAGAGTCTCTCTTCTCCAGATCGCTTGCCAATTCCACTCCGACCACCGGAATGATTCCGTGGTTTTTCTGCTCGACCTGCTCTCGGTTCCTTTATCCTCAGTTTGG
GATTTGTTAAGGGATGTTTTTGTTTCACCCCATGTTTTGAAATTGGGTTTTCGATTTAAGCAAGATTTGGTTTACCTGTCCACTACTTTCTGCTCCCATGGCGGTCTCTC
TGGTCTTGATCGTATTGAACCCTTTATGGATATTACGAGCATTTACAATCATCTTCAACATAAGCAAAATGGAAGAAAGTTGCATAAGCAAACTAAGAGTCTTGCAGCTA
TCTGCAATGAAGTACTGGGATTCTCTCTTTCGAAGGTTTGTCCATTTCACTTCCACATTCTTGTTTGTCAATTCAGTGATGAACTTCAATGTAGTGATTGGTCATTTCGT
CCCCTCACAGAAGAGCAGATAGCATACGCAGCCATGGATGCCCACTGCTTGCTCGAAATATTTAATGTCTTCTGCTCCAAGGTTCTTAAAGAAGGTCTGTCAGTGTCTGA
ACCTTGGGATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCGGATGATCTTGATCACGTGGCAGTACACGTAGATTATGACATGTGTCTTCTTATGGATTCCCAGAACGGCCGGCCTTCCTTTGAAATCCACATTGTTTCTTC
TATCGACTCTCCCGAGTTCAATCAGCTAACTCACACACTGACTCGCTCTCACCTTATTGCCCTCGACGCCGAGTGGAAGCCCCTTCGAACTCCTGATCAACATTCTTCAT
TCCCCAGAGTCTCTCTTCTCCAGATCGCTTGCCAATTCCACTCCGACCACCGGAATGATTCCGTGGTTTTTCTGCTCGACCTGCTCTCGGTTCCTTTATCCTCAGTTTGG
GATTTGTTAAGGGATGTTTTTGTTTCACCCCATGTTTTGAAATTGGGTTTTCGATTTAAGCAAGATTTGGTTTACCTGTCCACTACTTTCTGCTCCCATGGCGGTCTCTC
TGGTCTTGATCGTATTGAACCCTTTATGGATATTACGAGCATTTACAATCATCTTCAACATAAGCAAAATGGAAGAAAGTTGCATAAGCAAACTAAGAGTCTTGCAGCTA
TCTGCAATGAAGTACTGGGATTCTCTCTTTCGAAGGTTTGTCCATTTCACTTCCACATTCTTGTTTGTCAATTCAGTGATGAACTTCAATGTAGTGATTGGTCATTTCGT
CCCCTCACAGAAGAGCAGATAGCATACGCAGCCATGGATGCCCACTGCTTGCTCGAAATATTTAATGTCTTCTGCTCCAAGGTTCTTAAAGAAGGTCTGTCAGTGTCTGA
ACCTTGGGATTTCTAG
Protein sequenceShow/hide protein sequence
MLADDLDHVAVHVDYDMCLLMDSQNGRPSFEIHIVSSIDSPEFNQLTHTLTRSHLIALDAEWKPLRTPDQHSSFPRVSLLQIACQFHSDHRNDSVVFLLDLLSVPLSSVW
DLLRDVFVSPHVLKLGFRFKQDLVYLSTTFCSHGGLSGLDRIEPFMDITSIYNHLQHKQNGRKLHKQTKSLAAICNEVLGFSLSKVCPFHFHILVCQFSDELQCSDWSFR
PLTEEQIAYAAMDAHCLLEIFNVFCSKVLKEGLSVSEPWDF