CuGenDBv2

Gene ID	Lsi05G001180
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	3'-5' exonuclease domain-containing protein
Genome location	chr05:1880736..1883539
RNA-Seq Expression	Lsi05G001180
Synteny	Lsi05G001180
Gene Ontology terms	GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004386 - helicase activity (molecular function) GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domains	IPR002782 - Mut7-C RNAse domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK11277.1 exonuclease mut-7-like protein [Cucumis melo var. makuwa]

1.1e-154

90.52

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GD+LRNVSAVPSTEMN GLKVILEKQD+H+KILRTKVSEASNIIRATAS F Q MANIRGNCSASSSINCM +DEDLQK+VKSYGE+I+LKESDKKP+ S
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKV CSEKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELIDQA KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

XP_004146233.1 exonuclease mut-7 homolog [Cucumis sativus]

3.5e-153

90.2

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GDVLRNVSAVPSTEMN GL+VILEKQD+HEKILRTKVSEASNIIRATAS F Q MANIRG CSASSSINCM +DEDLQK+VKSYGE+IILKESDKKP+TS
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRK KRSSTMKV C EKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELIDQA KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETF+LKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

XP_008455993.1 PREDICTED: exonuclease mut-7 homolog [Cucumis melo]

9.3e-154

89.87

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GD+LRNVSAVPSTEMN GLKVILEKQD+H+KILRTKVSEASNIIRATAS F Q MANIRGNCS SSSINCM +DEDLQK+VKSYGE+I+LKESDKKP+ S
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKV CSEKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELID+A KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

XP_038895816.1 exonuclease mut-7 homolog isoform X1 [Benincasa hispida]

4.3e-167

95.15

Show/hide

Query:  MITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKP
        ++ GDVLRNVSAVPSTEMNIGLKVILEKQD HEKILRTKVSEASNIIRATASDF Q MANIRGNCSASSSINCMH+DEDLQKIVKSYGEKI+LKESDKKP
Subjt:  MITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKP

Query:  RTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRH
        RTSKRKGKRSSTMKVVCSEK+IVCVEDW+GPPP D SFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSK+PDSRELIDQACKEKRVLLTRDAKLLRH
Subjt:  RTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRH

Query:  EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQK
        EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIP+CLFD+NLEFWQCMDCHQLYWEGIQYRNAIQK
Subjt:  EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQK

Query:  FIDVCKLND
        FIDVCKLND
Subjt:  FIDVCKLND

XP_038895817.1 exonuclease mut-7 homolog isoform X2 [Benincasa hispida]

4.3e-167

95.15

Show/hide

Query:  MITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKP
        ++ GDVLRNVSAVPSTEMNIGLKVILEKQD HEKILRTKVSEASNIIRATASDF Q MANIRGNCSASSSINCMH+DEDLQKIVKSYGEKI+LKESDKKP
Subjt:  MITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKP

Query:  RTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRH
        RTSKRKGKRSSTMKVVCSEK+IVCVEDW+GPPP D SFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSK+PDSRELIDQACKEKRVLLTRDAKLLRH
Subjt:  RTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRH

Query:  EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQK
        EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIP+CLFD+NLEFWQCMDCHQLYWEGIQYRNAIQK
Subjt:  EYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQK

Query:  FIDVCKLND
        FIDVCKLND
Subjt:  FIDVCKLND

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6Q0 3'-5' exonuclease domain-containing protein

1.7e-153

90.2

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GDVLRNVSAVPSTEMN GL+VILEKQD+HEKILRTKVSEASNIIRATAS F Q MANIRG CSASSSINCM +DEDLQK+VKSYGE+IILKESDKKP+TS
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRK KRSSTMKV C EKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELIDQA KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETF+LKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

A0A1S3C2A3 exonuclease mut-7 homolog

4.5e-154

89.87

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GD+LRNVSAVPSTEMN GLKVILEKQD+H+KILRTKVSEASNIIRATAS F Q MANIRGNCS SSSINCM +DEDLQK+VKSYGE+I+LKESDKKP+ S
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKV CSEKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELID+A KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

A0A5A7U5M5 Exonuclease mut-7-like protein

4.5e-154

89.87

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GD+LRNVSAVPSTEMN GLKVILEKQD+H+KILRTKVSEASNIIRATAS F Q MANIRGNCS SSSINCM +DEDLQK+VKSYGE+I+LKESDKKP+ S
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKV CSEKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELID+A KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

A0A5D3CH52 Exonuclease mut-7-like protein

5.3e-155

90.52

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GD+LRNVSAVPSTEMN GLKVILEKQD+H+KILRTKVSEASNIIRATAS F Q MANIRGNCSASSSINCM +DEDLQK+VKSYGE+I+LKESDKKP+ S
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKV CSEKQIV  EDW GPPP DLS GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P SRELIDQA KEKRVLLTRDAKLLRH YL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        L NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWEGIQYRNA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLND
Subjt:  VCKLND

A0A6J1E542 exonuclease mut-7 homolog

8.4e-153

88.89

Show/hide

Query:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS
        GDVLRNVSAVPS E+NIGLKVILEKQD HEKILRTK+SEAS IIRATASDF Q  A +R +CSASSSINCM +DEDL KIVK YGEKIILKESDK PRTS
Subjt:  GDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKIILKESDKKPRTS

Query:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL
        KRKGKRSSTMKVVCSEK+I+ VEDW+G PP DLS GGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSK+PDSRELIDQACKEKRVLLTRDAKLLRHEYL
Subjt:  KRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHEYL

Query:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID
        LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG FIQK LTTEEAV AAKGFQ+IP+CLFDKNLEFWQCMDCHQLYWEG QY NA+QKFID
Subjt:  LCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFID

Query:  VCKLND
        VCKLN+
Subjt:  VCKLND

SwissProt top hits

e value

%identity

Alignment

Q8N9H8 Exonuclease mut-7 homolog

1.1e-05

31.37

Show/hide

Query:  KFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKL--LRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTK
        + +CD M++GLA+ LRC+G+DA +      D R   + A +E R++LT       LR +      +    SL   +Q   V++ FN++++   + SRC  
Subjt:  KFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKL--LRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTK

Query:  CN
        CN
Subjt:  CN

Arabidopsis top hits

e value

%identity

Alignment

AT5G24340.1 3'-5' exonuclease domain-containing protein

7.7e-106

58.66

Show/hide

Query:  MYIKTHLHDELRLLK-SRQYMITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDL
        +Y  T  H  L++      +++ G  ++++  +     N+GL+ IL + D   KI+  K+ +A+++IR + S+  Q +AN  G     +++N M +DE+L
Subjt:  MYIKTHLHDELRLLK-SRQYMITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDL

Query:  QKIVKSYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELI
         KIV+ +GE+I+LKESD  P+  K+K +R      + + KQ+VC  DW+GPPP D S GGDGCPKFL DVMVEGLAKHLRCVGIDAA+P SK+PDSREL+
Subjt:  QKIVKSYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELI

Query:  DQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQ
        DQA KE RVLLTRD KLLRH+ L  +QIYRVKSLLKNEQLLEVIETF LKIS +QLMSRCTKCNG+FIQK L+ EEA++AAKGFQ+IPNCLF+KNLEFWQ
Subjt:  DQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQ

Query:  CMDCHQLYWEGIQYRNAIQKFIDVCKLND
        CM+CHQLYWEG QY NA+QKF++VCKL++
Subjt:  CMDCHQLYWEGIQYRNAIQKFIDVCKLND

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATATAAAAACCCATCTTCACGATGAGCTAAGGCTATTGAAGTCAAGGCAGTATATGATAACTGGAGATGTTTTAAGGAATGTTTCTGCAGTTCCTTCCACTGAAAT
GAATATTGGGTTGAAAGTGATTCTGGAAAAGCAAGATGTGCATGAGAAGATATTAAGGACCAAAGTTTCTGAAGCCTCAAACATTATCAGAGCTACTGCATCTGATTTTT
CACAGTGTATGGCTAATATAAGGGGAAATTGTTCTGCCTCATCGAGTATAAATTGTATGCATATCGATGAAGATCTTCAGAAAATTGTCAAGAGCTACGGTGAAAAAATT
ATTTTGAAAGAGTCAGACAAAAAACCCAGGACCTCCAAAAGAAAAGGCAAGAGATCATCGACTATGAAAGTGGTTTGCAGTGAAAAGCAAATCGTGTGTGTTGAAGATTG
GCGAGGACCCCCACCATTGGATTTGTCCTTTGGGGGTGATGGATGCCCTAAATTTCTATGTGATGTTATGGTTGAAGGTCTTGCAAAACATCTACGTTGTGTTGGGATTG
ATGCTGCAGTTCCATTTTCCAAAAGGCCGGACTCTAGGGAATTAATTGATCAAGCGTGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAG
TATTTGTTATGTAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAATGAACAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTC
TAGATGTACCAAATGCAATGGAAGGTTTATTCAAAAGTCCCTTACAACGGAGGAGGCTGTGCAGGCAGCGAAGGGTTTCCAAAAAATTCCTAACTGTTTGTTTGACAAGA
ATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGGGATACAATATCGCAATGCAATCCAGAAGTTCATTGATGTTTGCAAGTTGAATGACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYIKTHLHDELRLLKSRQYMITGDVLRNVSAVPSTEMNIGLKVILEKQDVHEKILRTKVSEASNIIRATASDFSQCMANIRGNCSASSSINCMHIDEDLQKIVKSYGEKI
ILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWRGPPPLDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKRPDSRELIDQACKEKRVLLTRDAKLLRHE
YLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDKNLEFWQCMDCHQLYWEGIQYRNAIQKFIDVCKLND

Lsi05G001180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome