CuGenDBv2

Gene ID	Lsi05G001300
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	reticulon-4-interacting protein 1, mitochondrial
Genome location	chr05:1948500..1949834
RNA-Seq Expression	Lsi05G001300
Synteny	Lsi05G001300
Gene Ontology terms	GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577009.1 Reticulon-4-interacting protein 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-64

87.5

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEF +KGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLV+GLP ATS+L+QKQ +YR SHGIEYWWTYMRADSEGLDEIRRLCEA 
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAH+AKDKN+IPGKV+ E++
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

TYK11256.1 reticulon-4-interacting protein 1 [Cucumis melo var. makuwa]

2.9e-65

89.71

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+GLPF+T VL+QKQ KYR SH IEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

XP_008456012.1 PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cucumis melo]

2.9e-65

89.71

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+GLPF+T VL+QKQ KYR SH IEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

XP_011651297.1 reticulon-4-interacting protein 1, mitochondrial [Cucumis sativus]

2.6e-66

90.44

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYG+V+GLPF+T VL+QKQ KYR SHGIEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

XP_038879486.1 reticulon-4-interacting protein 1, mitochondrial [Benincasa hispida]

3.1e-67

91.24

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLV+GLPFATS+L+QKQ KYR SHGIEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVEK
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E ++
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVEK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6P2 PKS_ER domain-containing protein

1.3e-66

90.44

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYG+V+GLPF+T VL+QKQ KYR SHGIEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

A0A1S3C3H1 reticulon-4-interacting protein 1, mitochondrial

1.4e-65

89.71

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+GLPF+T VL+QKQ KYR SH IEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

A0A5A7UZ93 Reticulon-4-interacting protein 1

1.4e-65

89.71

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+GLPF+T VL+QKQ KYR SH IEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

A0A5D3CLG4 Reticulon-4-interacting protein 1

1.4e-65

89.71

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEFKIKGKFDAVLDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+GLPF+T VL+QKQ KYR SH IEYWWTYMRADSEGL+EIRRLCEAE
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAHDAKDKNLIPGKV+ E +
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

A0A6J1E5E5 reticulon-4-interacting protein 1, mitochondrial

2.7e-64

87.5

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Query:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE
        GIEF +KGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLV+GLP ATS+L+QKQ +YR SHGIEYWWTYMRADSEGLDEIRRLCEA 
Subjt:  GIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAE

Query:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE
        KLKIPVEKTFPITQV EAH+AKDKN IPGKV+ E++
Subjt:  KLKIPVEKTFPITQVGEAHDAKDKNLIPGKVIREVE

SwissProt top hits

e value

%identity

Alignment

Q924D0 Reticulon-4-interacting protein 1, mitochondrial

6.8e-09

31.25

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Query:  FDAVLDTIGVPDTERIGIHLLNR--GGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAEKLKIPVE
        FD +LD +G   TE   ++ L +  G  Y+TL        DR G+  G+   T V +  +    L  G+ Y W +  A    LDEI  L +A K++  +E
Subjt:  FDAVLDTIGVPDTERIGIHLLNR--GGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAEKLKIPVE

Query:  KTFPITQVGEAHDAKDKNLIPGKVIREV
        +TFP ++V EA    ++    GK +  V
Subjt:  KTFPITQVGEAHDAKDKNLIPGKVIREV

Arabidopsis top hits

e value

%identity

Alignment

AT3G15090.1 GroES-like zinc-binding alcohol dehydrogenase family protein

4.6e-53

72.18

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Query:  IEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAEK
        IE  +KGKFDAVLDTIG P+TERIGI+ L +GG+YMTLQGEAASLTD+YG V+GLP ATS+LM+K+ +Y+ SHGI+YWWTYMRAD EGL EI+RL  A K
Subjt:  IEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAEK

Query:  LKIPVEKTFPITQVGEAHDAKDKNLIPGKVIRE
        LKIPVEKTFPIT V  AH+AK+K  IPGKV+ E
Subjt:  LKIPVEKTFPITQVGEAHDAKDKNLIPGKVIRE

Sequences

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CDS sequence

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ATGAATGGCATTGAATTCAAAATAAAGGGGAAATTTGATGCCGTTTTGGATACAATTGGTGTGCCAGATACGGAAAGAATTGGCATCCATCTTTTGAATAGAGGTGGACA
CTATATGACACTTCAGGGCGAGGCTGCATCATTGACTGATAGATATGGACTAGTTATCGGGCTTCCTTTTGCTACAAGTGTACTGATGCAGAAACAGTTCAAGTATAGAT
TGTCTCATGGAATTGAATATTGGTGGACATACATGAGGGCAGATTCCGAAGGTTTAGACGAGATCAGGAGGCTATGTGAAGCTGAAAAGCTGAAGATACCGGTCGAGAAA
ACGTTTCCGATTACACAAGTAGGAGAGGCTCATGATGCAAAGGATAAGAACCTCATTCCTGGTAAAGTGATTAGAGAAGTAGAAAAAGTAAGAAGAGATTCTATTTGGCC
TGCTGTTAGACAATACAGTGTTTCTTAA

mRNA sequence

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Protein sequence

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MNGIEFKIKGKFDAVLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGLPFATSVLMQKQFKYRLSHGIEYWWTYMRADSEGLDEIRRLCEAEKLKIPVEK
TFPITQVGEAHDAKDKNLIPGKVIREVEKVRRDSIWPAVRQYSVS

Lsi05G001300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome