CuGenDBv2

Gene ID	Lsi05G001470
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Transmembrane protein
Genome location	chr05:2139347..2140165
RNA-Seq Expression	Lsi05G001470
Synteny	Lsi05G001470
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576996.1 hypothetical protein SDJN03_24570, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-54

98.18

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]

2.9e-55

100

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLARDWPRQ
Subjt:  EDLARDWPRQ

XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]

1.9e-54

98.18

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

XP_023552104.1 uncharacterized protein LOC111809873 isoform X1 [Cucurbita pepo subsp. pepo]

5.5e-54

97.27

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEV+VFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]

1.9e-54

99.09

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA DWPRQ
Subjt:  EDLARDWPRQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C293 uncharacterized protein LOC103496084

1.4e-55

100

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLARDWPRQ
Subjt:  EDLARDWPRQ

A0A6J1E545 uncharacterized protein LOC111430823 isoform X2

7.8e-54

97.27

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

A0A6J1FMS5 uncharacterized protein LOC111446881

5.9e-54

97.27

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDR+FQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

A0A6J1J176 uncharacterized protein LOC111481757

1.3e-53

96.36

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X2

9.2e-55

98.18

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQ
        EDLA+DWPRQ
Subjt:  EDLARDWPRQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

1.1e-36

61.02

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        +LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S SFSGLLLF +G +LFMV+FVKD+EF SFFA G V+L++ MA+WRV FE K+
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQTTHSFAHA
        EDLA +WP+Q     A A
Subjt:  EDLARDWPRQTTHSFAHA

AT3G15358.1 unknown protein

7.2e-36

60.17

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Query:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL
        +LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S SFSGLLLF +G +LFMV+FVKDREF SFFA G V+L++ MA+WRV FE K+
Subjt:  MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKL

Query:  EDLARDWPRQTTHSFAHA
        EDLA + P+Q     A A
Subjt:  EDLARDWPRQTTHSFAHA

Sequences

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CDS sequence

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ATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGTCATGGCCCTGAAACAGCAATCAAGCTGCAGGGATC
TAGCCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGATAGAGAGT
TCCAAAGCTTCTTTGCTAAAGGCTGCGTGTTGCTTCATCTAGCTATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCACGAGATTGGCCTCGACAG
ACAACACATTCATTTGCTCATGCTGGCTATCTTCTGCAAGATTGTGCATTTTGCCTTTCTTTATGGTTAGAATCAGAGTTCCAACTCCATGCCAAAAATGGCATTTTGGA
CCATGAATGTGACCCCTGGAGTAGTAACCGGGGCAAGGAGCAACTCATGGCAGGCTGCTAG

mRNA sequence

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Protein sequence

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MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ
TTHSFAHAGYLLQDCAFCLSLWLESEFQLHAKNGILDHECDPWSSNRGKEQLMAGC

Lsi05G001470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome