CuGenDBv2

Gene ID	Lsi05G001840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Maternal effect embryo arrest 9
Genome location	chr05:2639341..2639784
RNA-Seq Expression	Lsi05G001840
Synteny	Lsi05G001840
Gene Ontology terms	GO:0009555 - pollen development (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0015074 - DNA integration (biological process) GO:0009506 - plasmodesma (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ99746.1 uncharacterized protein E5676_scaffold252G00220 [Cucumis melo var. makuwa]

8.0e-65

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALIS FTFLSDQ L+DKNFDPSTIEDLMKLFEIE YKSWAAIELQHQNE QDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+LLDKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKA +VASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_004149957.1 uncharacterized protein LOC101218253 [Cucumis sativus]

2.3e-67

97.96

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSDQAL+DKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+LLDKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAA+VASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_022942791.1 uncharacterized protein LOC111447720 [Cucurbita moschata]

3.6e-65

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_023533822.1 uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]

8.0e-65

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNEV+DAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMG LMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

XP_038885707.1 uncharacterized protein LOC120075975 [Benincasa hispida]

3.8e-67

97.96

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSDQAL+DKNFDPSTIEDLMKLFEIEAYKSWAA+ELQHQNEVQDAEIAM QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAB6 Uncharacterized protein

1.1e-67

97.96

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSDQAL+DKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+LLDKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAA+VASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A5D3BKS0 Uncharacterized protein

3.9e-65

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALIS FTFLSDQ L+DKNFDPSTIEDLMKLFEIE YKSWAAIELQHQNE QDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+LLDKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKA +VASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1E4Z9 uncharacterized protein LOC111430656

1.5e-64

95.24

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ+AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQEL+DKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1FR93 uncharacterized protein LOC111447720

1.7e-65

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

A0A6J1JCA1 uncharacterized protein LOC111483158

1.5e-64

94.56

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALISQFTFLSDQAL+DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQEL+DKSE
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASMRSAWKAISSNKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G60870.1 maternal effect embryo arrest 9

2.5e-40

61.22

Show/hide

Query:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE
        MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA+E + Q E+++AE ++++AE  LD  ME  M+E+RR  EE +RM  AEL+EL +K+E
Subjt:  MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSE

Query:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
         AR+ G+LMEKAA VA+KR++ AAM SA ASMRSAWK  + NKVHPS
Subjt:  KARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCTCTCATCTCCCAGTTTACCTTCCTCTCCGATCAAGCTCTAAACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGC
TTACAAGTCCTGGGCCGCCATTGAGCTCCAACACCAGAACGAGGTTCAAGACGCCGAGATCGCCATGCAGCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGACGCCA
TGGATGAGTTCAGACGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCTGAACTCCAGGAACTCCTTGACAAATCTGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAG
AAGGCTGCGGCGGTTGCTTCCAAGAGGTACATGGAAGCAGCCATGAATTCCGCCACCGCTTCCATGAGATCCGCCTGGAAGGCTATTTCCTCCAATAAGGTTCATCCTTC
TTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEALISQFTFLSDQALNDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSEKARKMGSLME
KAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Lsi05G001840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome