; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G001890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPatatin
Genome locationchr05:2669145..2669976
RNA-Seq ExpressionLsi05G001890
SyntenyLsi05G001890
Gene Ontology termsGO:0019433 - triglyceride catabolic process (biological process)
GO:0055088 - lipid homeostasis (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005811 - lipid droplet (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004806 - triglyceride lipase activity (molecular function)
InterPro domainsIPR033562 - Patatin-like phospholipase domain-containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600351.1 Patatin-like phospholipase domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6778.53Show/hide
Query:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG
        PPLSSIS PFSSPITNPNLNFT+RY LPLR QTLRF SNSSSS S    PP PPPPDPIPEKKS AVATG+L LGLAARLI RSS  ++N VAMF+NRSG
Subjt:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG

Query:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
         +S Y E+IGAVVEDEIQP VVWEQR+KDV+AE+ERRVVT+PGFSFSAAGLLFPYHLGVAKFL+E+SYIK+++ L G
Subjt:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

XP_004149962.1 patatin-like phospholipase domain-containing protein 2 [Cucumis sativus]6.8e-7483.43Show/hide
Query:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN
        MAPP LSSISHPFSSPITNPNLNFT+R++LPLR QTLRFISNSSSS   PPPPP PPPPDPIPEK+S AVATGELFLGLAARLIKRSSD T+ SV+MFDN
Subjt:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN

Query:  RSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        RSG NR+VY E+IGAVVEDEIQPGV+WEQRVKDVEAE+ER +VT+PGFSFSAAGLLFPYHLGVAKFLLEN+YIK+++ L G
Subjt:  RSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

XP_008456089.1 PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis melo]1.5e-7385.16Show/hide
Query:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD
        MAPP LSSISHPF SSPITNPNLNFT R+ LPLR QTLRFISNSSSS S PPPPP PPPPDPIPEK+SLAVATGELFLGLAARLIKRSSD T+NSV+MFD
Subjt:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD

Query:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        NR+G NRSVY E+IGAVVEDEIQPGV+WEQRVKDVEAE+ER +VT+PGFSFSAAGLLFPYHLGVAKFLLENSYIK+++ L G
Subjt:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

XP_022943045.1 patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]6.6e-6979.66Show/hide
Query:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG
        PPLSSIS PFSSPITNPNLNFT+RY LPLR QTLRF SNSSSS S  PP PPPPPPDPIPEKKS AVATG+L LGLAARLI RSS  ++N VAMF+NRSG
Subjt:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG

Query:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
         +S Y E+IGAVVEDEIQP VVWEQR+KDV+AE+ERRVVT+PGFSFSAAGLLFPYHLGVAKFL+E+SYIK+++ L G
Subjt:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

XP_038878130.1 patatin-like phospholipase domain-containing protein 4 [Benincasa hispida]2.3e-8289.44Show/hide
Query:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN
        MAPPPLSSISHPFSSPITNPN NFTYRYALPLR QTLRFISNSSSSPS PPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLI RSSD TTNSVAMFDN
Subjt:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN

Query:  RSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        RSGN+SV+ E+IGAVVEDEIQPGV+WEQRVKDVEAE+ERRV+T+PGFSFSAAGLLFPYHLGVA FLLENSYIK+++ L G
Subjt:  RSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

TrEMBL top hitse value%identityAlignment
A0A0A0L746 Patatin3.3e-7483.43Show/hide
Query:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN
        MAPP LSSISHPFSSPITNPNLNFT+R++LPLR QTLRFISNSSSS   PPPPP PPPPDPIPEK+S AVATGELFLGLAARLIKRSSD T+ SV+MFDN
Subjt:  MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDN

Query:  RSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        RSG NR+VY E+IGAVVEDEIQPGV+WEQRVKDVEAE+ER +VT+PGFSFSAAGLLFPYHLGVAKFLLEN+YIK+++ L G
Subjt:  RSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

A0A1S3C2I5 Patatin7.4e-7485.16Show/hide
Query:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD
        MAPP LSSISHPF SSPITNPNLNFT R+ LPLR QTLRFISNSSSS S PPPPP PPPPDPIPEK+SLAVATGELFLGLAARLIKRSSD T+NSV+MFD
Subjt:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD

Query:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        NR+G NRSVY E+IGAVVEDEIQPGV+WEQRVKDVEAE+ER +VT+PGFSFSAAGLLFPYHLGVAKFLLENSYIK+++ L G
Subjt:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

A0A5A7T6F4 Patatin7.4e-7485.16Show/hide
Query:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD
        MAPP LSSISHPF SSPITNPNLNFT R+ LPLR QTLRFISNSSSS S PPPPP PPPPDPIPEK+SLAVATGELFLGLAARLIKRSSD T+NSV+MFD
Subjt:  MAPPPLSSISHPF-SSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFD

Query:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
        NR+G NRSVY E+IGAVVEDEIQPGV+WEQRVKDVEAE+ER +VT+PGFSFSAAGLLFPYHLGVAKFLLENSYIK+++ L G
Subjt:  NRSG-NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

A0A6J1FXB2 Patatin3.2e-6979.66Show/hide
Query:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG
        PPLSSIS PFSSPITNPNLNFT+RY LPLR QTLRF SNSSSS S  PP PPPPPPDPIPEKKS AVATG+L LGLAARLI RSS  ++N VAMF+NRSG
Subjt:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG

Query:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
         +S Y E+IGAVVEDEIQP VVWEQR+KDV+AE+ERRVVT+PGFSFSAAGLLFPYHLGVAKFL+E+SYIK+++ L G
Subjt:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

A0A6J1IWB3 Patatin9.6e-6676.84Show/hide
Query:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG
        PPLSSIS  FSSPITNPNLNFT+RY LPLR QTLRF SNSSSS S     P PPPPDPIPEKKS AVATG+L LGLAARLI RSS  ++N VAMF+NRSG
Subjt:  PPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSG

Query:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG
         +S Y E+IGAVVEDEIQP VVWEQR+KDV+AE+ERRVVT+PGFSFSAAGLLFPYHLGVAKFL+E++YIK+++ L G
Subjt:  NRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33270.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein1.8e-3258.62Show/hide
Query:  KKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAK
        K+S AVATGELF+G+A+RL+K S+  T       D+        G++I +V+EDEI+P ++WEQRVKDVEAE+ERRV+T+PGFSFSAAGLLFPYHLGVA+
Subjt:  KKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAK

Query:  FLLENSYIKDSSDLDG
         L+E  YIK+++ L G
Subjt:  FLLENSYIKDSSDLDG

AT1G33270.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein1.8e-3258.62Show/hide
Query:  KKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAK
        K+S AVATGELF+G+A+RL+K S+  T       D+        G++I +V+EDEI+P ++WEQRVKDVEAE+ERRV+T+PGFSFSAAGLLFPYHLGVA+
Subjt:  KKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSGNRSVYGEKIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAK

Query:  FLLENSYIKDSSDLDG
         L+E  YIK+++ L G
Subjt:  FLLENSYIKDSSDLDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTCCTCCTCTCTCTTCTATTTCCCATCCCTTTTCTTCCCCAATTACAAACCCTAATCTCAATTTCACTTACAGATACGCTCTTCCTCTTCGCTTCCAAACTCT
ACGTTTCATTTCCAATTCATCTTCTTCTCCATCGCCTCCACCGCCGCCACCGCCTCCTCCTCCGCCGGATCCCATTCCCGAGAAGAAGTCTCTCGCCGTAGCCACCGGGG
AGCTCTTCTTGGGGCTAGCAGCGAGGCTGATTAAGCGCTCTTCCGACAATACCACAAACTCGGTTGCTATGTTCGATAATCGCAGTGGGAACAGGAGTGTGTACGGGGAG
AAAATCGGCGCGGTGGTTGAGGATGAGATTCAGCCCGGTGTAGTGTGGGAGCAACGGGTTAAAGACGTTGAGGCCGAGCAGGAGCGGCGAGTCGTTACCAACCCTGGCTT
CAGTTTCTCCGCCGCTGGTTTGCTGTTTCCGTACCATCTTGGAGTTGCGAAATTTCTATTAGAGAATAGTTATATCAAGGACAGTTCAGATTTAGATGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
CATCGGTTCGGCACAAACAAAACTAACAGAAGCTCTCACTTTTTTGCTTTCTTCTTCTTCTTCTTCAACAATGGCTCCTCCTCCTCTCTCTTCTATTTCCCATCCCTTTT
CTTCCCCAATTACAAACCCTAATCTCAATTTCACTTACAGATACGCTCTTCCTCTTCGCTTCCAAACTCTACGTTTCATTTCCAATTCATCTTCTTCTCCATCGCCTCCA
CCGCCGCCACCGCCTCCTCCTCCGCCGGATCCCATTCCCGAGAAGAAGTCTCTCGCCGTAGCCACCGGGGAGCTCTTCTTGGGGCTAGCAGCGAGGCTGATTAAGCGCTC
TTCCGACAATACCACAAACTCGGTTGCTATGTTCGATAATCGCAGTGGGAACAGGAGTGTGTACGGGGAGAAAATCGGCGCGGTGGTTGAGGATGAGATTCAGCCCGGTG
TAGTGTGGGAGCAACGGGTTAAAGACGTTGAGGCCGAGCAGGAGCGGCGAGTCGTTACCAACCCTGGCTTCAGTTTCTCCGCCGCTGGTTTGCTGTTTCCGTACCATCTT
GGAGTTGCGAAATTTCTATTAGAGAATAGTTATATCAAGGACAGTTCAGATTTAGATGGATTTTAA
Protein sequenceShow/hide protein sequence
MAPPPLSSISHPFSSPITNPNLNFTYRYALPLRFQTLRFISNSSSSPSPPPPPPPPPPPDPIPEKKSLAVATGELFLGLAARLIKRSSDNTTNSVAMFDNRSGNRSVYGE
KIGAVVEDEIQPGVVWEQRVKDVEAEQERRVVTNPGFSFSAAGLLFPYHLGVAKFLLENSYIKDSSDLDGF