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Lsi05G001970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G001970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome b-c1 complex subunit 6
Genome locationchr05:2754822..2757740
RNA-Seq ExpressionLsi05G001970
SyntenyLsi05G001970
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]5.6e-1096.67Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYWSCIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

KDP43002.1 hypothetical protein JCGZ_25188 [Jatropha curcas]8.7e-1181.08Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPFL
        ACVKRI+GD+ GHKHCTGQYFDYWSC+DKC LN  FL
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPFL

PIA59488.1 hypothetical protein AQUCO_00400400v1 [Aquilegia coerulea]4.3e-1093.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGD+GGHKHCTGQYFDYWSC+DKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

PPR81848.1 hypothetical protein GOBAR_AA38865 [Gossypium barbadense]3.9e-1181.58Show/hide
Query:  MMACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPF
        + ACVKRIQGD+ GHKHCTGQYFDYWSC+DKCGL +PF
Subjt:  MMACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPF

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]5.6e-1096.67Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYWSCIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

TrEMBL top hitse value%identityAlignment
A0A067L3J7 UCR_hinge domain-containing protein4.2e-1181.08Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPFL
        ACVKRI+GD+ GHKHCTGQYFDYWSC+DKC LN  FL
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPFL

A0A0A0L6I2 UCR_hinge domain-containing protein2.7e-1096.67Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYWSCIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

A0A1S3C350 Cytochrome b-c1 complex subunit 62.7e-1096.67Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYWSCIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

A0A2G5EUR3 UCR_hinge domain-containing protein2.1e-1093.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGD+GGHKHCTGQYFDYWSC+DKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

A0A2P5VSP2 UCR_hinge domain-containing protein1.9e-1181.58Show/hide
Query:  MMACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPF
        + ACVKRIQGD+ GHKHCTGQYFDYWSC+DKCGL +PF
Subjt:  MMACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPF

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 66.9e-1180Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        AC KR++GD+ GHKHCTGQYFDYW CIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.2e-1293.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYW CIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial6.9e-1183.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQ D+ GHKHCTGQYFDYW C+DKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.5e-1393.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYW CIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein1.5e-1393.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQGDD GHKHCTGQYFDYW CIDKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein4.9e-1283.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQ D+ GHKHCTGQYFDYW C+DKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein4.9e-1283.33Show/hide
Query:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC
        ACVKRIQ D+ GHKHCTGQYFDYW C+DKC
Subjt:  ACVKRIQGDDGGHKHCTGQYFDYWSCIDKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGTGCGTGAAGAGAATCCAAGGGGATGACGGCGGTCATAAGCATTGCACTGGACAGTATTTTGATTACTGGTCTTGCATTGACAAATGTGGACTCAACAACCC
ATTTCTCGCTTCCGCCGTCGTTGTCGCGGCCGCCGCTTTTGTCATCTTTACTAGGACCGAAAGAAGAAGAATCTTCGATCAACGTCGTCGATGTCGCTGTATTGTTATTC
TCTTTATTAATGAGCGAAGAAATGGCGGCGGCTACGGCGACTCGAAACTTAGGGTCAGAAGCAATAGCAGACATGCTCTCGGGCGTGAACGGTGGCTTATTATCATCAGC
CGGTTTCCACGGGCGGCGGTTGAGGGGAGTCAAAAGATGATTAGGTTGAAAATTGGTATGGTAAAAGGAATTAGGGTTGGTATTGATCCAATTGGAGGATTGGGGGAAGT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCGTGCGTGAAGAGAATCCAAGGGGATGACGGCGGTCATAAGCATTGCACTGGACAGTATTTTGATTACTGGTCTTGCATTGACAAATGTGGACTCAACAACCC
ATTTCTCGCTTCCGCCGTCGTTGTCGCGGCCGCCGCTTTTGTCATCTTTACTAGGACCGAAAGAAGAAGAATCTTCGATCAACGTCGTCGATGTCGCTGTATTGTTATTC
TCTTTATTAATGAGCGAAGAAATGGCGGCGGCTACGGCGACTCGAAACTTAGGGTCAGAAGCAATAGCAGACATGCTCTCGGGCGTGAACGGTGGCTTATTATCATCAGC
CGGTTTCCACGGGCGGCGGTTGAGGGGAGTCAAAAGATGATTAGGTTGAAAATTGGTATGGTAAAAGGAATTAGGGTTGGTATTGATCCAATTGGAGGATTGGGGGAAGT
TTGA
Protein sequenceShow/hide protein sequence
MMACVKRIQGDDGGHKHCTGQYFDYWSCIDKCGLNNPFLASAVVVAAAAFVIFTRTERRRIFDQRRRCRCIVILFINERRNGGGYGDSKLRVRSNSRHALGRERWLIIIS
RFPRAAVEGSQKMIRLKIGMVKGIRVGIDPIGGLGEV