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Lsi05G002410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLYR motif-containing protein At3g19508
Genome locationchr05:3169422..3170304
RNA-Seq ExpressionLsi05G002410
SyntenyLsi05G002410
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]2.6e-3693.83Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY

XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]2.1e-3897.56Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_015892821.1 LYR motif-containing protein At3g19508 [Ziziphus jujuba]1.3e-3590.24Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDAND+ +LEELFHRAYNHS+WVLNKYSVD SAADKLKE+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]4.4e-3695.12Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]2.3e-3796.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGEVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAY HS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein1.2e-3693.83Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY

A0A1S3C3W4 LYR motif-containing protein At3g195081.0e-3897.56Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A5A7T6G8 LYR motif-containing protein1.0e-3897.56Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A6J1FPX9 LYR motif-containing protein At3g195082.1e-3695.12Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A6P4A9N6 LYR motif-containing protein At3g195086.1e-3690.24Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDAND+ +LEELFHRAYNHS+WVLNKYSVD SAADKLKE+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS

SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868631.5e-1055.17Show/hide
Query:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNK
        Y EVL+LV+RLP  +R YYA+YARENFV Y EV+  D +S+  L  R ++H+ WVL K
Subjt:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNK

Q1G3M2 LYR motif-containing protein At3g195081.6e-2874.07Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS+D SAA KLKEIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY

Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein1.1e-2974.07Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS+D SAA KLKEIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCCCTGAGAATATACGGCGAAGTTTTGAGGTTAGTGCGGCGGTTACCTAAGGACACGAGGCCTTACTACGCCAAGTACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTATAACCACTCCGTTTGGGTTCTAAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAGCTGAAGGAGATCTGTTATAGTTAA
mRNA sequenceShow/hide mRNA sequence
AACAAAACAGGGCCTCAATGATGAAGGATTCGTATAGTTAAGAACATGAAGAAGGGACGTCGTTGGCCCTAGAAGCGGTCAGACGGCGGCGCATTTTGATCGGAGAGAAA
TGGAGAAGGCCCTGAGAATATACGGCGAAGTTTTGAGGTTAGTGCGGCGGTTACCTAAGGACACGAGGCCTTACTACGCCAAGTACGCTCGAGAGAATTTCGTCAACTAC
AGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTATAACCACTCCGTTTGGGTTCTAAACAAGTATTCGGTGGATGGATCTGCGGCGGA
TAAGCTGAAGGAGATCTGTTATAGTTAATGTAAGGATCCGCGTCGGATTTTACAGTTGAAACTCCGGCGGTGGCGGGCATGAATTCTGATGAATTCAGAAGAGGTAGGGA
ATTGGAGGATTATGGATTTATGTGCCTGCCTATGTGACAATTTAACCTTTGTGATTGTTGGGTTTTCATAGTTCTAAACAATTTTTTTTTCTTTTTTTGAGAAATCTTTT
TAGTTCGAACAATTGACGATTTTTTTTTTCTTTTTTTTAATGAGCTTTGGATGATCTAGGCACACAATTTTTTTTTCTTTTCAAAGTACTTTGGATAGTTTTTTCTCGGA
CAAAATGTACTTTTGATTTATGAAGCTTGGTGTTGATTAGGTTCAAAAAAAATAAATCTAAATAACAGTAGGTTCTCACCATTAGTTTACTAAAGCTTAAACTAATATAA
AGTTACTAGAAACAAT
Protein sequenceShow/hide protein sequence
MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVDGSAADKLKEICYS