; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G002560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:3269774..3270928
RNA-Seq ExpressionLsi05G002560
SyntenyLsi05G002560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456185.1 PREDICTED: uncharacterized protein LOC103496200 [Cucumis melo]1.8e-6788.39Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        M+SHVKGPFP IPP LPHPN NT VLRFTAPLALT +TCRIATTAAAILAAA VI+SP PS+ATE+S ++SEQQEES+TLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
XP_022934221.1 uncharacterized protein LOC111441457 isoform X1 [Cucurbita moschata]3.4e-6691.45Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRIATTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
XP_022934222.1 uncharacterized protein LOC111441457 isoform X2 [Cucurbita moschata]2.6e-6690.32Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRIATTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
XP_023526623.1 uncharacterized protein LOC111790064 isoform X2 [Cucurbita pepo subsp. pepo]3.4e-6690.32Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRIATTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
XP_038884945.1 uncharacterized protein LOC120075531 [Benincasa hispida]4.3e-6992.81Show/hide
Query:  SHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKARI
        SHV+GPFPQIPP L HPNSN AVLRFTAPLALTRATCRIATTAAAILAAA +ISSPAPS+ATESSTSISEQQEESTTLSNIPQTLSGEC QPSDCKKARI
Subjt:  SHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKARI

Query:  QRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        QRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPI+VFKQGFRSRQY  V
Subjt:  QRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
TrEMBL top hitse value%identityAlignment
A0A1S3C289 uncharacterized protein LOC1034962008.8e-6888.39Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        M+SHVKGPFP IPP LPHPN NT VLRFTAPLALT +TCRIATTAAAILAAA VI+SP PS+ATE+S ++SEQQEES+TLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
A0A5A7T6W8 Uncharacterized protein8.8e-6888.39Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        M+SHVKGPFP IPP LPHPN NT VLRFTAPLALT +TCRIATTAAAILAAA VI+SP PS+ATE+S ++SEQQEES+TLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
A0A6J1F186 uncharacterized protein LOC111441457 isoform X11.7e-6691.45Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRIATTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY
A0A6J1F235 uncharacterized protein LOC111441457 isoform X21.3e-6690.32Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRIATTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
A0A6J1J3Q4 uncharacterized protein LOC111482398 isoform X24.8e-6689.68Show/hide
Query:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA
        MISHVKGPFP I PAL HPN N+AV+RFTAPLALTRA+CRI TTAAAILAAAVVI SPAPS+A ESS+++SEQQEESTTLSNIPQTLSGECAQPSDCKKA
Subjt:  MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKA

Query:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
        RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQY  V
Subjt:  RIQRPKSRKAESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78995.1 unknown protein1.8e-2554.03Show/hide
Query:  LALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGE
        L    A  RI+T     +AAAV++++ + +SA      +    ++  TLSN+PQTLSGE     DCKK RIQRPKS+ AE CT+KCV TCIR GD   GE
Subjt:  LALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPGE

Query:  GPLNIRRPIVVFKQGFRSRQYWCV
        GP+NIRRP+VVFKQGFRSR Y  V
Subjt:  GPLNIRRPIVVFKQGFRSRQYWCV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCCATGTAAAAGGTCCATTTCCACAAATTCCACCAGCCCTACCACATCCAAATTCCAACACCGCCGTCCTCCGATTCACCGCTCCTCTCGCCCTAACCAGAGC
CACTTGCCGGATCGCAACCACTGCGGCGGCGATTCTAGCAGCTGCAGTCGTGATTTCTTCGCCGGCGCCGTCTTCCGCAACCGAGAGCAGCACTAGCATATCGGAACAAC
AAGAAGAAAGTACTACGCTGTCGAACATTCCGCAGACGCTTTCCGGCGAGTGCGCGCAACCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCG
GAATCGTGCACGATCAAGTGCGTCGGAACTTGCATTCGAGGCGGCGATGGATCTCCCGGAGAAGGTCCTCTGAACATCAGAAGACCGATTGTTGTTTTCAAGCAAGGGTT
TCGAAGTCGTCAATACTGGTGCGTATGA
mRNA sequenceShow/hide mRNA sequence
CAAATTTCTCTTAAATTTTGTTTTCAAATTGATACCTAGCTTTCTCCAAAGCCATCCATATAGACACGTGGATCAATGCCAATCTTCTAAAAGCGTTTTAAAAATCAAAA
CACATTATCCAGAAGAAGAAGAAGAGGAGGAGGAAGAAGATGATTGGATTCTCGAAAGCAGAGCAGAGCAGAGTCAAAATCAAATCCTGAACTCCAGAATGATAAGCCAT
GTAAAAGGTCCATTTCCACAAATTCCACCAGCCCTACCACATCCAAATTCCAACACCGCCGTCCTCCGATTCACCGCTCCTCTCGCCCTAACCAGAGCCACTTGCCGGAT
CGCAACCACTGCGGCGGCGATTCTAGCAGCTGCAGTCGTGATTTCTTCGCCGGCGCCGTCTTCCGCAACCGAGAGCAGCACTAGCATATCGGAACAACAAGAAGAAAGTA
CTACGCTGTCGAACATTCCGCAGACGCTTTCCGGCGAGTGCGCGCAACCGAGCGACTGCAAGAAGGCGAGAATTCAACGGCCGAAGTCGAGGAAGGCGGAATCGTGCACG
ATCAAGTGCGTCGGAACTTGCATTCGAGGCGGCGATGGATCTCCCGGAGAAGGTCCTCTGAACATCAGAAGACCGATTGTTGTTTTCAAGCAAGGGTTTCGAAGTCGTCA
ATACTGGTGCGTATGACTCTCTTTAATTCTCAAAGTTATTTATTTATTTATTTTTCTTTATACTTCAATCAATACTTGCAATTAATATCTTATTAATTGAACTCTACTCA
GAGAGTAGCCCGTGATTATTTATATAGGTTAAATTTTAGATTTAATTATTTTTGTTCTATTTTAATTTCTATAAGTTTATTTCATTTTGATCTTAAATTTTTTAAAAATT
TTATTTTAGCTATGATAACTATTTTAGTATTTATTTATTATTATTATTTTTAACAAGAAACTACTTCTCATTTATGTAATGAAAAAAAAAAGTTTTAGCTTCGAATATGT
GTACGAGCATATTTAATATGAGCATGATTTCAAACTAAATAAGTTCAAGAACATTAGACATAATTGAAGGTAGAAAAGCA
Protein sequenceShow/hide protein sequence
MISHVKGPFPQIPPALPHPNSNTAVLRFTAPLALTRATCRIATTAAAILAAAVVISSPAPSSATESSTSISEQQEESTTLSNIPQTLSGECAQPSDCKKARIQRPKSRKA
ESCTIKCVGTCIRGGDGSPGEGPLNIRRPIVVFKQGFRSRQYWCV