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Lsi05G002680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAMPK1_CBM domain-containing protein
Genome locationchr05:3456436..3458647
RNA-Seq ExpressionLsi05G002680
SyntenyLsi05G002680
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581236.1 hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4277.24Show/hide
Query:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK
        KR+LI++NVVGSSGPLRFV  +EDLV +VIH ALKSYARQARLPLLGT+ SNFLLYSSN +   ASLNP ETIGSKQARNFVLCKK A   +SPLP D+ 
Subjt:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK

Query:  MKKFMTIKETHGWKAWINKSLSF
        MKK MT+KE+HGWKAWINKSLSF
Subjt:  MKKFMTIKETHGWKAWINKSLSF

XP_022143447.1 uncharacterized protein LOC111013321 [Momordica charantia]7.9e-4465.36Show/hide
Query:  MKGSLYNNNKHRRDDDEKKV-----IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIG
        MKGSLYN  K+   +D  ++      KR+LITI+VVGS+GPLRF+ N++DLV +VIH ALKSYARQARLPLLG + +NFLLY +N +     LNP E IG
Subjt:  MKGSLYNNNKHRRDDDEKKV-----IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIG

Query:  SKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
         KQARNFVLCKK  GTP  PL D+KMKK M IKE+HGWKAWINKSLSFKI SH
Subjt:  SKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

XP_022934727.1 uncharacterized protein LOC111441823 [Cucurbita moschata]1.5e-4277.24Show/hide
Query:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK
        KR+LI++NVVGSSGPLRFV  +EDLV +VIH ALKSYARQARLPLLGT+ SNFLLYSSN +   ASLNP ETIGSKQARNFVLCKK A   +SPLP D+ 
Subjt:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK

Query:  MKKFMTIKETHGWKAWINKSLSF
        MKK MT+KE+HGWKAWINKSLSF
Subjt:  MKKFMTIKETHGWKAWINKSLSF

XP_022983917.1 uncharacterized protein LOC111482395 [Cucurbita maxima]2.4e-4579.69Show/hide
Query:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK
        KR+LI++NVVGSSGPLRFV  +EDLV +VIH ALKSYARQARLPLLGT+ SNFLLYSS+ +   ASLNPRETIGSKQARNFVLCKKAA TP SPLP D+K
Subjt:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK

Query:  MKKFMTIKETHGWKAWINKSLSFKILSH
        MKK MT+KE+HGWKAWIN SLSFKI SH
Subjt:  MKKFMTIKETHGWKAWINKSLSFKILSH

XP_031739154.1 uncharacterized protein LOC116402875 [Cucumis sativus]2.4e-4874.32Show/hide
Query:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR
        MK SL NNNKHRRDD   K IKRVLITINV+GSSGPLRFVV +EDLV +VIHIALKSYARQARLPLLGT+P+NFLLYSSN      +LNP E IGSKQAR
Subjt:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR

Query:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
        NFVLCKK   TP          K MTIKE+HGWKAWINKSL+FKILSH
Subjt:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

TrEMBL top hitse value%identityAlignment
A0A0A0LBQ6 Uncharacterized protein1.1e-4874.32Show/hide
Query:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR
        MK SL NNNKHRRDD   K IKRVLITINV+GSSGPLRFVV +EDLV +VIHIALKSYARQARLPLLGT+P+NFLLYSSN      +LNP E IGSKQAR
Subjt:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR

Query:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
        NFVLCKK   TP          K MTIKE+HGWKAWINKSL+FKILSH
Subjt:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

A0A1S2YDA3 uncharacterized protein LOC1015042812.0e-2952.7Show/hide
Query:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR
        MK S++  N++ R D +    KR L+TIN++GSSGP+RFVVN+++LVS VI  ALKSYAR+ RLP+LG N SNFLLY  N ++   +LNP E IGS + R
Subjt:  MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQAR

Query:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
        NFVLCKK    PS   P  +++   + K   GWKAW+NKS   KILS+
Subjt:  NFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

A0A6J1CQV0 uncharacterized protein LOC1110133213.8e-4465.36Show/hide
Query:  MKGSLYNNNKHRRDDDEKKV-----IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIG
        MKGSLYN  K+   +D  ++      KR+LITI+VVGS+GPLRF+ N++DLV +VIH ALKSYARQARLPLLG + +NFLLY +N +     LNP E IG
Subjt:  MKGSLYNNNKHRRDDDEKKV-----IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIG

Query:  SKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
         KQARNFVLCKK  GTP  PL D+KMKK M IKE+HGWKAWINKSLSFKI SH
Subjt:  SKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

A0A6J1F3L9 uncharacterized protein LOC1114418237.2e-4377.24Show/hide
Query:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK
        KR+LI++NVVGSSGPLRFV  +EDLV +VIH ALKSYARQARLPLLGT+ SNFLLYSSN +   ASLNP ETIGSKQARNFVLCKK A   +SPLP D+ 
Subjt:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK

Query:  MKKFMTIKETHGWKAWINKSLSF
        MKK MT+KE+HGWKAWINKSLSF
Subjt:  MKKFMTIKETHGWKAWINKSLSF

A0A6J1J0M6 uncharacterized protein LOC1114823951.2e-4579.69Show/hide
Query:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK
        KR+LI++NVVGSSGPLRFV  +EDLV +VIH ALKSYARQARLPLLGT+ SNFLLYSS+ +   ASLNPRETIGSKQARNFVLCKKAA TP SPLP D+K
Subjt:  KRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLP-DKK

Query:  MKKFMTIKETHGWKAWINKSLSFKILSH
        MKK MT+KE+HGWKAWIN SLSFKI SH
Subjt:  MKKFMTIKETHGWKAWINKSLSFKILSH

SwissProt top hitse value%identityAlignment
Q56XJ7 Uncharacterized protein At4g227582.0e-0535.42Show/hide
Query:  KVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSS
        K   +V+I++ V GS GP+R +V     V + I I +  Y ++ R P L  + S F L+ S+F      L  RE IG   +R+F + KKA  T  S
Subjt:  KVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSS

Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein3.8e-2043.08Show/hide
Query:  RVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMK
        R+LI++  +GS+GP+RFV N+ DLV+ VI  ALK YAR+ RLP+LG++ ++F+ Y         +L+P E IGS   RNF+LCKK          DK   
Subjt:  RVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMK

Query:  KFMTIKETHG----WKAWINKSLSFKILSH
         F       G    +KAWINKSL  K+ +H
Subjt:  KFMTIKETHG----WKAWINKSLSFKILSH

AT1G70780.1 unknown protein5.8e-2140Show/hide
Query:  NKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKA
        NK +++ + K    R+LI++ V+GS+GP+RFV  ++DLV+ VI  ALK YAR+ RLPLLG++ ++FLLY         +L+  + IGS  ARNF+LC+K 
Subjt:  NKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKA

Query:  AGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH
                  +        ++    KAWINKS + K+ SH
Subjt:  AGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

AT2G27830.1 unknown protein1.1e-0633.72Show/hide
Query:  IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLL-GTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLC
        + ++L+ + V GS G ++ +++ E  VS +I  A++ Y ++AR P L  + PS F L+ S F     S+   E + S  +RNF LC
Subjt:  IKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLL-GTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLC

AT4G22758.1 unknown protein1.4e-0635.42Show/hide
Query:  KVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSS
        K   +V+I++ V GS GP+R +V     V + I I +  Y ++ R P L  + S F L+ S+F      L  RE IG   +R+F + KKA  T  S
Subjt:  KVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSS

AT5G37730.1 unknown protein8.4e-2040.62Show/hide
Query:  RDDDEKKVIKR----VLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKA
        R+++ K V+KR    +L+++NV+GS GP+RF+ N++D VS  I+  LK+YARQ R+P+LG +  NF+ YS N  +   +L+P+E IGS    NF++CKK 
Subjt:  RDDDEKKVIKR----VLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKA

Query:  AGTPSSPLPDKKMKKFMTIKET--HGWK
              P P +K++     +    HGWK
Subjt:  AGTPSSPLPDKKMKKFMTIKET--HGWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAAGTTTATACAATAATAATAAACATAGAAGAGATGATGATGAGAAGAAGGTGATAAAGAGAGTATTGATTACTATAAATGTTGTGGGAAGTTCAGGTCCATT
AAGATTTGTGGTGAATAAAGAAGATTTAGTTTCTCAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTAATCCTTCCAACT
TTCTTCTCTACTCTTCTAATTTTGACTACTTACGTGCCTCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGCTGCAGGT
ACACCATCATCCCCATTGCCTGATAAAAAGATGAAAAAGTTTATGACAATAAAGGAAACCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATATTATC
TCATTAA
mRNA sequenceShow/hide mRNA sequence
GAATAGGACAAACTCTTTGGACTTCTCTCTTACCTACATCTCTTCATATATTGAATTAAGGGGAAAATTTAAAGAGAAAGAGGAAGATCAAAAGAGATAATGAAGGGAAG
TTTATACAATAATAATAAACATAGAAGAGATGATGATGAGAAGAAGGTGATAAAGAGAGTATTGATTACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGG
TGAATAAAGAAGATTTAGTTTCTCAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTAATCCTTCCAACTTTCTTCTCTAC
TCTTCTAATTTTGACTACTTACGTGCCTCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGCTGCAGGTACACCATCATC
CCCATTGCCTGATAAAAAGATGAAAAAGTTTATGACAATAAAGGAAACCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATATTATCTCATTAAGATA
ATCGCGTGCTTGTTTAAGCCCCGTTGATAATCATTTGGATTAGTGAGTGGCTTACTATTGTACTATAGAAAATTAATGTATTTGCGCTCGTTTGATAATCATTTGGATTT
TG
Protein sequenceShow/hide protein sequence
MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAG
TPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH