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Lsi05G002730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKinesin light chain 3
Genome locationchr05:3554543..3557913
RNA-Seq ExpressionLsi05G002730
SyntenyLsi05G002730
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047377.1 kinesin light chain 3 isoform X1 [Cucumis melo var. makuwa]1.8e-3677.48Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

TYK14053.1 kinesin light chain 3 [Cucumis melo var. makuwa]3.7e-3790.32Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPR
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR R
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPR

XP_008457118.2 PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo]1.8e-3677.48Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

XP_011651210.1 uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus]3.4e-3575.68Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLP+DHIQI ANMLH+ARVVML SNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

XP_031738902.1 protein KINESIN LIGHT CHAIN-RELATED 1 isoform X3 [Cucumis sativus]3.4e-3575.68Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLP+DHIQI ANMLH+ARVVML SNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

TrEMBL top hitse value%identityAlignment
A0A0A0L903 Uncharacterized protein1.7e-3575.68Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLP+DHIQI ANMLH+ARVVML SNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

A0A1S3C5G7 uncharacterized protein LOC1034968678.8e-3777.48Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

A0A5A7TZJ1 Kinesin light chain 3 isoform X18.8e-3777.48Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR     +   
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRELTMVDN

Query:  NTGSESKSSHE
        +   E K  H+
Subjt:  NTGSESKSSHE

A0A5D3CQC2 Kinesin light chain 31.8e-3790.32Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPR
        GWNSLETINSADGLAS LYANGCLKEAQELLERCLDARKSLLPEDHIQI ANMLH+ARVVMLSSNELKATD+ KAV A D+ARELLNNSIR R
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPR

A0A6J1CQP6 uncharacterized protein LOC111013309 isoform X24.8e-3561.22Show/hide
Query:  LASQHVRQRVEGVAGAWSPCMTDL-----GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATD
        L    VR   EG  G    C+  L     GWNSL+TINSADGLAS LYANGCLKEAQELLERCLDARK++LPE HIQIGANMLH+ARV+MLSSNELK  D
Subjt:  LASQHVRQRVEGVAGAWSPCMTDL-----GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATD

Query:  IPKAVIAIDKARELLNNSIRPRELTMVDNNTGSESKSSHESCQINEE
        I KAVIA+DKARELL +SIR     +   +   E K  HE  +  ++
Subjt:  IPKAVIAIDKARELLNNSIRPRELTMVDNNTGSESKSSHESCQINEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-1941.46Show/hide
Query:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRE--LTMV
        GWNS+E I +A+ LA  L  +G L EA EL E+CL+ARK LLPE HIQIG N+LH+A+  ML +++++ TD  +A+  ++KA+  L NS R  +  L  +
Subjt:  GWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKAVIAIDKARELLNNSIRPRE--LTMV

Query:  DNNTGSESKSSHESCQINEEEYS
         N      K    S  +   E++
Subjt:  DNNTGSESKSSHESCQINEEEYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGAAAAGTTCAACCACTCATGCATCCTCGCGAGCCAGCATGTGAGACAGAGGGTGGAGGGTGTTGCAGGTGCATGGAGCCCATGCATGACTGATTTGGGATG
GAATTCTCTGGAAACTATAAATTCTGCTGACGGCTTGGCCTCAATGCTATATGCCAATGGGTGCCTGAAGGAAGCACAAGAGCTTCTTGAGAGGTGTCTTGATGCACGGA
AAAGTTTACTTCCTGAGGACCACATCCAGATTGGTGCTAACATGCTTCACCTTGCTCGAGTGGTAATGCTAAGTTCCAATGAACTAAAGGCGACTGATATTCCTAAAGCA
GTTATTGCAATTGATAAAGCAAGAGAACTTTTAAATAACTCCATAAGGCCTCGAGAGCTCACAATGGTGGATAACAATACTGGTTCTGAGAGCAAATCAAGCCATGAGTC
ATGCCAAATTAACGAAGAGGAATACTCAATGTGTGGAGTCTTTCATGACTCTGAATTATATCCAAACAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGAAAAGTTCAACCACTCATGCATCCTCGCGAGCCAGCATGTGAGACAGAGGGTGGAGGGTGTTGCAGGTGCATGGAGCCCATGCATGACTGATTTGGGATG
GAATTCTCTGGAAACTATAAATTCTGCTGACGGCTTGGCCTCAATGCTATATGCCAATGGGTGCCTGAAGGAAGCACAAGAGCTTCTTGAGAGGTGTCTTGATGCACGGA
AAAGTTTACTTCCTGAGGACCACATCCAGATTGGTGCTAACATGCTTCACCTTGCTCGAGTGGTAATGCTAAGTTCCAATGAACTAAAGGCGACTGATATTCCTAAAGCA
GTTATTGCAATTGATAAAGCAAGAGAACTTTTAAATAACTCCATAAGGCCTCGAGAGCTCACAATGGTGGATAACAATACTGGTTCTGAGAGCAAATCAAGCCATGAGTC
ATGCCAAATTAACGAAGAGGAATACTCAATGTGTGGAGTCTTTCATGACTCTGAATTATATCCAAACAGGTAG
Protein sequenceShow/hide protein sequence
MVGEKFNHSCILASQHVRQRVEGVAGAWSPCMTDLGWNSLETINSADGLASMLYANGCLKEAQELLERCLDARKSLLPEDHIQIGANMLHLARVVMLSSNELKATDIPKA
VIAIDKARELLNNSIRPRELTMVDNNTGSESKSSHESCQINEEEYSMCGVFHDSELYPNR