; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G002820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:3680956..3683646
RNA-Seq ExpressionLsi05G002820
SyntenyLsi05G002820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606995.1 hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia]4.4e-5780.15Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MALNLHC   SARF+S+H +V+      LNRT KL +NS KF RIRSSA+SN+QLTLRTCRNCKAQFDPSLNHPR+CRFHTAHFGGETKRKFESVH+GG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

XP_011651192.1 uncharacterized protein LOC101208221 [Cucumis sativus]5.4e-6386.13Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MA NLHCYHSSA F+SLH K  VL  D LNRT KL SNSPK L IR SA+SNNQLTLRTCRNCKAQFDPSLNHPR+CRFHT+HFGGETKRKFESVHSGG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD
        MDTPDSGKVFQYWHCCGSEDPFDPGCTAS HSSYDDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD

XP_022143294.1 uncharacterized protein LOC111013199 [Momordica charantia]2.3e-5881.16Show/hide
Query:  MALNLHCYHSSARFLSLHPKV--QVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSG
        MALNLHCY SS RFL L PK   +VL  DRLNR  KL ++S KF  IR+SA+SNNQLTLRTCRNCK QFDPSLNHPR+CRFHTAHFGGETKRKFESVH+G
Subjt:  MALNLHCYHSSARFLSLHPKV--QVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSG

Query:  GSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        G+MDTPDSGKVFQYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  GSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

XP_022997797.1 uncharacterized protein LOC111492645 [Cucurbita maxima]2.0e-5780.15Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MALNLHC   SARF+S H +V+      LNRT KL +NSPK  RIRSSA+S+NQLTLRTCRNCKAQFDPSLNHPR+CRFHTAHFGGETKRKFESVH+GG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

XP_038879129.1 uncharacterized protein LOC120071126 [Benincasa hispida]3.5e-7093.43Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MALNLHCYHSSARFLSLHPK+QV+  DRLNRT KL SNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPR+CRFHTAHFGGETKRKFESVHSGG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD
        MDTPDSGKVFQYWHCCGSEDPFDPGCTAS HSSYDDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD

TrEMBL top hitse value%identityAlignment
A0A0A0L8V5 Uncharacterized protein2.6e-6386.13Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MA NLHCYHSSA F+SLH K  VL  D LNRT KL SNSPK L IR SA+SNNQLTLRTCRNCKAQFDPSLNHPR+CRFHT+HFGGETKRKFESVHSGG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD
        MDTPDSGKVFQYWHCCGSEDPFDPGCTAS HSSYDDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD

A0A1S3C5F2 uncharacterized protein LOC1034968571.4e-5680.29Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MA NLHCYHSS  F+SLH    VL       T K  SNS KFL IR SA+SNNQLTLRTCRNCK+QFDPSLNHPR+CRFHTAHFGGETKRKFESVH GG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD
        MDTPDSGKVFQYWHCCGSEDPFDPGCTAS HSSYDDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDDD

A0A6J1CNX1 uncharacterized protein LOC1110131991.1e-5881.16Show/hide
Query:  MALNLHCYHSSARFLSLHPKV--QVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSG
        MALNLHCY SS RFL L PK   +VL  DRLNR  KL ++S KF  IR+SA+SNNQLTLRTCRNCK QFDPSLNHPR+CRFHTAHFGGETKRKFESVH+G
Subjt:  MALNLHCYHSSARFLSLHPKV--QVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSG

Query:  GSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        G+MDTPDSGKVFQYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  GSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

A0A6J1G9P5 uncharacterized protein LOC1114522273.6e-5780.15Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MALNLHC   SARF+S H +V+      LNRT KL +NS KF RIRSSA+SN+QLTLRTCRNCKAQFDPSLNHPR+CRFHTAHFGGETKRKFESVH+GG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

A0A6J1K626 uncharacterized protein LOC1114926459.5e-5880.15Show/hide
Query:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS
        MALNLHC   SARF+S H +V+      LNRT KL +NSPK  RIRSSA+S+NQLTLRTCRNCKAQFDPSLNHPR+CRFHTAHFGGETKRKFESVH+GG+
Subjt:  MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGS

Query:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+ HSSYDD
Subjt:  MDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein1.2e-0732.91Show/hide
Query:  RTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        + C+ CK  +    N   SCRFH + F     R+ +       +   D     +++ CCG+EDP  PGC  + H SYDD
Subjt:  RTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

AT5G38060.1 unknown protein3.0e-4071.72Show/hide
Query:  NSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        NS +F    +++ S+   TLRTC+NCK QFDP LN+PR+CRFHTAHFGGETKRKFESV++GG+MDTP+SGKV QYWHCCGSEDPFD GCTAS H++YDD
Subjt:  NSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD

AT5G38060.2 unknown protein2.0e-3161.62Show/hide
Query:  NSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD
        NS +F    +++ S+   TLRTC+NCK QFDP LN+PR+CRFHTAHFG            GG+MDTP+SGKV QYWHCCGSEDPFD GCTAS H++YDD
Subjt:  NSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVFQYWHCCGSEDPFDPGCTASLHSSYDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAATCTCCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATCCAAAAGTTCAGGTTCTTCCCCCTGATCGTCTGAATCGCACTTTGAAACTGATTTC
AAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGCGGACTCGAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTCGACCCCTCCCTCAATCACC
CACGATCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGATCAATGGACACTCCAGACTCTGGCAAAGTTTTT
CAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTCTGCACTCGTCCTACGACGATGATTAA
mRNA sequenceShow/hide mRNA sequence
TTTAGAAACAAAATTTGTAATTTAAGCTTATTTTTATTTTCAAATAGATCAACGTATCAAACTCTACAGCTATTCGACTATTATTGTTACAGATTCTATCATTTCGGAGC
TATGGCTCTCAATCTCCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATCCAAAAGTTCAGGTTCTTCCCCCTGATCGTCTGAATCGCACTTTGAAACTGATTT
CAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGCGGACTCGAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTCGACCCCTCCCTCAATCAC
CCACGATCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGATCAATGGACACTCCAGACTCTGGCAAAGTTTT
TCAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTCTGCACTCGTCCTACGACGATGATTAATATTGCAAATCGACTACCTTTTCTC
CAGGTTCTCTTCATTATTGCAAGACTCCTGATCTTTTTTTTCTCCTTCCTGAAGTCCTGTGTACAAGTGTACATATTCATATCCTATCTTAATTGTTTACTTCTTGAACG
AAAATCCATCTTACATTGTTGCCTCTTTATATGGGAATGCCAACAATATTATTATAGTTAATTGTGTTTTAAATATGGATCAATGGAAAATTTGTCTGAGATTATAATC
Protein sequenceShow/hide protein sequence
MALNLHCYHSSARFLSLHPKVQVLPPDRLNRTLKLISNSPKFLRIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRSCRFHTAHFGGETKRKFESVHSGGSMDTPDSGKVF
QYWHCCGSEDPFDPGCTASLHSSYDDD