; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G002830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr05:3685879..3689401
RNA-Seq ExpressionLsi05G002830
SyntenyLsi05G002830
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060718.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa]4.6e-13672.53Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN
        MELSFT APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNW+VL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------------------------------------------GMGIYDAMKLCKA
        MLLRQRIIFL                                                                             GMGIYDAMKLCKA
Subjt:  MLLRQRIIFL-----------------------------------------------------------------------------GMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQG  GSDEERGSQQETEEPSPV
Subjt:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]3.1e-14080.24Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN
        MELSFT APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNW+VL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFL                                         GMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        KAKKNLPSE+KIL+NGYQG  GSDEERGSQQETEEPSPV
Subjt:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]7.6e-13979.06Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNM
        MELSFT APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFRIRN SVPVV  PS +SSSLRRTLSSNW+V  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH
        LLRQRIIFL                                         GMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGY-QGSRGSDEERGSQQETEEPSPV
        AKKNLPSE+KIL+NGY +G +GSD+ERG QQETEEPSPV
Subjt:  AKKNLPSENKILQNGY-QGSRGSDEERGSQQETEEPSPV

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]1.3e-13877.38Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFT  PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  R   S P+VK SL+SSS+RRTLSSNW+VL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFL                                         GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        KNLPSE+KILQNGYQG +G+DEERG+QQETEEPSPV
Subjt:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]6.4e-14681.55Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL
        MELSFT APS SPHRLMR DHG  SS+FPIS PSKHSHGGNSTSNAFRIRNSVPVV PS NSSSLRRTLSS+W+VLDNYSASSAPSLPRFEELDTTNMLL
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFL                                         GMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAK+YGLIDEVIDDGKPGLIAP AEATPPPKTRVWDLWKVEGSRK K
Subjt:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        KNLPSENKILQNGYQ  +GSDEERGSQQETEE SPV
Subjt:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit3.7e-13979.06Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNM
        MELSFT APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFRIRN SVPVV  PS +SSSLRRTLSSNW+V  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH
        LLRQRIIFL                                         GMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGY-QGSRGSDEERGSQQETEEPSPV
        AKKNLPSE+KIL+NGY +G +GSD+ERG QQETEEPSPV
Subjt:  AKKNLPSENKILQNGY-QGSRGSDEERGSQQETEEPSPV

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit1.5e-14080.24Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN
        MELSFT APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNW+VL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFL                                         GMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        KAKKNLPSE+KIL+NGYQG  GSDEERGSQQETEEPSPV
Subjt:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

A0A5A7UZN2 ATP-dependent Clp protease proteolytic subunit2.2e-13672.53Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN
        MELSFT APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNW+VL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------------------------------------------GMGIYDAMKLCKA
        MLLRQRIIFL                                                                             GMGIYDAMKLCKA
Subjt:  MLLRQRIIFL-----------------------------------------------------------------------------GMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQG  GSDEERGSQQETEEPSPV
Subjt:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit6.2e-13977.38Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFT  PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  R   S P+VK SL+SSS+RRTLSSNW+VL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
        RQRIIFL                                         GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM+YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV
        KNLPSE+KILQNGYQG +G+DEERG+QQETEEPSPV
Subjt:  KNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit7.9e-13476.92Show/hide
Query:  MELSFTCAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPV--VKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN
        MELSFT APSPS H RLM F+HG L+S FP+STP KHSHG NS+SNAFRIR SVPV  VK SL+SS LRRTLSSNW+VL NYSA+SAP+LPRFEELDTTN
Subjt:  MELSFTCAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPV--VKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFL                                         GMGIYDAMKLCKADVSTVC+GLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REM+YHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSP
        KAKKNLPSE KILQNGYQ   GSDEER  Q ETEEPSP
Subjt:  KAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSP

SwissProt top hitse value%identityAlignment
A5I6W1 ATP-dependent Clp protease proteolytic subunit8.6e-3763.64Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        GM IYD M+  K DVST+C+G+AASMGAFLLAAG+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TGKPLEQ+ELDT+RD+
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVIDDGK
        F++  EAKEYGLIDEVID  K
Subjt:  FMNPWEAKEYGLIDEVIDDGK

A7FYI2 ATP-dependent Clp protease proteolytic subunit8.6e-3763.64Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        GM IYD M+  K DVST+C+G+AASMGAFLLAAG+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TGKPLEQ+ELDT+RD+
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVIDDGK
        F++  EAKEYGLIDEVID  K
Subjt:  FMNPWEAKEYGLIDEVIDDGK

B1IND7 ATP-dependent Clp protease proteolytic subunit8.6e-3763.64Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        GM IYD M+  K DVST+C+G+AASMGAFLLAAG+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TGKPLEQ+ELDT+RD+
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVIDDGK
        F++  EAKEYGLIDEVID  K
Subjt:  FMNPWEAKEYGLIDEVIDDGK

C1FLA6 ATP-dependent Clp protease proteolytic subunit8.6e-3763.64Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        GM IYD M+  K DVST+C+G+AASMGAFLLAAG+KGKR+ +PN  VMIHQPLG   G+AT++ I    +   K KLN I S  TGKPLEQ+ELDT+RD+
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVIDDGK
        F++  EAKEYGLIDEVID  K
Subjt:  FMNPWEAKEYGLIDEVIDDGK

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic4.7e-9158.99Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F +R+S+ + KP       R+TLSSNW+V     +  A S   LP FEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRI+FL                                         GMGIYDAMK CKADVSTVCLGLAASMGAFLLA+GSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 54.1e-3460.68Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        GM I+D M+  + DVSTVC+GLAASMGAFLL+AG+KGKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ LE+I  DTDRD 
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVI
        FM+  EAKEYGLID VI
Subjt:  FMNPWEAKEYGLIDEVI

AT1G11750.1 CLP protease proteolytic subunit 63.3e-2343.59Show/hide
Query:  MGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNF
        + IYD M   K  V TV  G+AAS GA LLA G KG R+ MPN RVMIHQP    GG   ++  ++ E    + K++++++  TG+PLE+++  T+RD F
Subjt:  MGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNF

Query:  MNPWEAKEYGLIDEVID
        ++  EA E+GLID +++
Subjt:  MNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 33.3e-9258.99Show/hide
Query:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F +R+S+ + KP       R+TLSSNW+V     +  A S   LP FEELDTTN
Subjt:  MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRI+FL                                         GMGIYDAMK CKADVSTVCLGLAASMGAFLLA+GSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFL-----------------------------------------GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

AT5G23140.1 nuclear-encoded CLP protease P78.3e-2747.06Show/hide
Query:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN
        G+ IYD M+  ++ +ST+CLG AASM + LLAAG+KG+R  +PN  VMIHQP G   G+A +++I  +++      LN+++ + TG+PL+ +  + DRD+
Subjt:  GMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDN

Query:  FMNPWEAKEYGLIDEVIDD
        FM P EAK +G+IDEVID+
Subjt:  FMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P41.6e-3033.85Show/hide
Query:  SSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDN--YSASSAPSLPRFEELDTTNMLLRQRIIFLG--------------
        SS  P    S+ +   +++S++F   N++ +    L S  LR T  S     +     + +  S  R  E D   +LLR+RI+FLG              
Subjt:  SSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDN--YSASSAPSLPRFEELDTTNMLLRQRIIFLG--------------

Query:  ---------------------------MGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHK
                                   M IYD ++L +ADVST+ LG+AAS  + +L AG+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K
Subjt:  ---------------------------MGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHK

Query:  IKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP
          +  I +  T +  EQ+  D DRD +M+P EA EYGLID VID      + P+ +   P
Subjt:  IKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAGTTTCACATGTGCACCTTCTCCTTCGCCTCATAGGCTTATGCGCTTCGACCATGGATTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAGCACTC
CCATGGCGGTAATTCCACTTCAAATGCTTTTAGAATCAGAAATTCGGTTCCGGTAGTAAAGCCCTCGCTTAATTCCTCTTCTCTTAGACGGACTTTATCCAGTAATTGGA
ATGTTTTGGACAACTATTCTGCATCTTCCGCTCCATCGCTGCCTCGATTCGAAGAGCTTGACACTACCAACATGCTTCTCCGGCAGCGAATCATCTTCTTGGGAATGGGA
ATATATGATGCAATGAAGTTGTGCAAGGCCGACGTTTCAACCGTTTGTCTGGGACTCGCTGCATCCATGGGAGCATTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATT
CTGTATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATACGAGAAATGTCGTACCACAAGATTAAGC
TAAACAAAATTTTTTCTAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATC
GACGAAGTTATTGACGATGGGAAGCCTGGACTTATTGCTCCAATTGCTGAGGCAACTCCTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTCGGAA
AGCCAAGAAGAATTTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAGGGGAGTCGAGGAAGTGACGAGGAGCGCGGTAGCCAGCAGGAAACAGAAGAACCGAGTC
CTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGAGTTTCACATGTGCACCTTCTCCTTCGCCTCATAGGCTTATGCGCTTCGACCATGGATTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAGCACTC
CCATGGCGGTAATTCCACTTCAAATGCTTTTAGAATCAGAAATTCGGTTCCGGTAGTAAAGCCCTCGCTTAATTCCTCTTCTCTTAGACGGACTTTATCCAGTAATTGGA
ATGTTTTGGACAACTATTCTGCATCTTCCGCTCCATCGCTGCCTCGATTCGAAGAGCTTGACACTACCAACATGCTTCTCCGGCAGCGAATCATCTTCTTGGGAATGGGA
ATATATGATGCAATGAAGTTGTGCAAGGCCGACGTTTCAACCGTTTGTCTGGGACTCGCTGCATCCATGGGAGCATTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATT
CTGTATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATACGAGAAATGTCGTACCACAAGATTAAGC
TAAACAAAATTTTTTCTAGAATCACAGGAAAGCCATTAGAGCAGATTGAATTGGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATC
GACGAAGTTATTGACGATGGGAAGCCTGGACTTATTGCTCCAATTGCTGAGGCAACTCCTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTCGGAA
AGCCAAGAAGAATTTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAGGGGAGTCGAGGAAGTGACGAGGAGCGCGGTAGCCAGCAGGAAACAGAAGAACCGAGTC
CTGTATGACACAAGACTCACCCGTTCCTCTTCTTCCCCCGTTCCTCTGCCTCTATTGTTGTATCCTAGCTTGTTCTTTCCATTCTCAAATAGCTCTTTCTCTGTAAGATC
TTAAAGGTGATTATTACCAATCAGTTAAACAAGTATAGGTTTTGAAAAATTCAAGAGTCCAATTATTCCCCTTGTCTAGATTCTAAAATATTGGTCGAGTCGATATTGAA
TCTGTCTCGAAACTTCGGCTCAATGTGCAATGGATCACCAATGACCATGATTCTGAGTAAGGTTGCTGCAACTTAAATGGAAGTTTCTGAGTTTTGTAGGTCTCTCTGGT
AGGCTGAGATTTGGATTATGATGGAAGGCAGGTGATAATGTTTGAATGCAAAGTAATCATGCAATGCATTGTTAAATGGGAAGGTGTTCTTGCCACTTGTGTGGAAAATT
AGGATGCTGCAGTTGCATGTTATAGTTGGAGTAATTGCCTTCTAAAGGATGTGGTAGATATTTATAAACACTTAGA
Protein sequenceShow/hide protein sequence
MELSFTCAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWNVLDNYSASSAPSLPRFEELDTTNMLLRQRIIFLGMG
IYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMSYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGSRGSDEERGSQQETEEPSPV