; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G002940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G002940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHMA domain-containing protein
Genome locationchr05:3751632..3753238
RNA-Seq ExpressionLsi05G002940
SyntenyLsi05G002940
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606999.1 Heavy metal-associated isoprenylated plant protein 36, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3560.54Show/hide
Query:  RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGS
        RGVYKV+I+ E+QKVT+ GNVDS+ LIKKL KLGK A+LW+STSKQDE  EE  LRKN  N ++DA DPSY+FQN+YM PIFD EFNN  L E YL Q +
Subjt:  RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGS

Query:  GMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVG-IQGYQF
         MSS FR+  V+  AAQKAR           M+SM H+V  IQ YQF
Subjt:  GMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVG-IQGYQF

XP_008457088.1 PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo]5.6e-6868.63Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST LIKKL KLGKHAELW STS   EGEE+N RK + NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
          DP Y+FQNQ+M PI++REFNNR LFE YLDQ  GMS+SFRYHPVTTTAAQKARA+ DNEKLGNQMISMAHNVGIQ +QFDGVPD+A VR ++FGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

XP_023525957.1 heavy metal-associated isoprenylated plant protein 32-like [Cucurbita pepo subsp. pepo]7.4e-3654.86Show/hide
Query:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS
        SK + H+LKV ++                GVYKV+I+ E+QKVT+ GNVDS+ LIKKL KLGK A+LW+STSKQDE  EE  LRKN  N ++DA DPSY+
Subjt:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS

Query:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF
        FQN+Y  P+FD EFNN  L E YL Q +GMSS FR+ PVT  A QKA            MISMAH+ V IQGYQF
Subjt:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF

XP_031739218.1 heavy metal-associated isoprenylated plant protein 28-like [Cucumis sativus]1.4e-7172.06Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST LIKKL KLGKHAELW STSK  EGEE+NLRK I NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
        A DP Y+FQNQ+M PI +REFNNR LFE YLDQ SGMS+SFRYHPVTTTAAQKARA  DNEKLGNQMISMAHNVGIQ +QFDGVPD+  VRDYRFGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

XP_038878146.1 uncharacterized protein LOC120070300 [Benincasa hispida]1.6e-7575Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKNQSH +KVE                         GVYKVNIN EQQKVTVTG+VDST LIKKLLKLGKHAELWSSTSKQDE EEANLRKNI NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
        A +P YS QNQYM PIFDR FNNR LFE YLDQ SGMSSSFRYHPVTT AAQKARA+ +NEKLGNQMIS+AHNVGIQG QFDGVPD A+V+DYRFGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

TrEMBL top hitse value%identityAlignment
A0A0A0L6R9 HMA domain-containing protein6.9e-7272.06Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST LIKKL KLGKHAELW STSK  EGEE+NLRK I NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
        A DP Y+FQNQ+M PI +REFNNR LFE YLDQ SGMS+SFRYHPVTTTAAQKARA  DNEKLGNQMISMAHNVGIQ +QFDGVPD+  VRDYRFGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

A0A1S3C605 uncharacterized protein LOC1034968522.7e-6868.63Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST LIKKL KLGKHAELW STS   EGEE+N RK + NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
          DP Y+FQNQ+M PI++REFNNR LFE YLDQ  GMS+SFRYHPVTTTAAQKARA+ DNEKLGNQMISMAHNVGIQ +QFDGVPD+A VR ++FGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

A0A5D3BQ38 HMA domain-containing protein2.7e-6868.63Show/hide
Query:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST LIKKL KLGKHAELW STS   EGEE+N RK + NQMKD
Subjt:  MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Query:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD
          DP Y+FQNQ+M PI++REFNNR LFE YLDQ  GMS+SFRYHPVTTTAAQKARA+ DNEKLGNQMISMAHNVGIQ +QFDGVPD+A VR ++FGIFPD
Subjt:  AADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPD

Query:  LPYA
         PYA
Subjt:  LPYA

A0A6J1GBR0 heavy metal-associated isoprenylated plant protein 37-like1.5e-3453.14Show/hide
Query:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS
        SK + H+LKV ++                GVYKV+I+ E+QKVT+ GNVDS+ LI+KL KLGK A+LW+STSKQDE  EE  LRKN  N ++DA DPSY+
Subjt:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS

Query:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF
        FQN+YM PIFD EFNN  L E YL Q +GMSS FR+ PVT             +K    MISMAH+ V IQ YQF
Subjt:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF

A0A6J1KBU2 heavy metal-associated isoprenylated plant protein 32-like6.8e-3554.29Show/hide
Query:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS
        SK + H+LKV ++                GVYKV+I+ E+QKVT+ GNVDS+ LIKKL KLGK A+LW+STSKQDE  EE  LRKN  N ++DA DPSY+
Subjt:  SKNQSHLLKVEVS---------------RGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE-GEEANLRKNIHNQMKDAADPSYS

Query:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF
        FQN+Y  PI D EF+N  L E YL Q +GMSS FR+ PVT  AAQKAR           M+SMAH+ V IQ YQF
Subjt:  FQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHN-VGIQGYQF

SwissProt top hitse value%identityAlignment
A2RVM8 Heavy metal-associated isoprenylated plant protein 376.8e-0852.54Show/hide
Query:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHN
        GV  V I  E QKVTV+G+VDS TLI KL+K GKHAELWS    Q++ ++      I N
Subjt:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHN

F4JZL7 Heavy metal-associated isoprenylated plant protein 336.4e-0648.57Show/hide
Query:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK
        L K+E   GV+   I+ E  KVTV+GNVD + LIKKLLK GKHAE+W +  K       N + N+ NQ K
Subjt:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK

Q0WV37 Heavy metal-associated isoprenylated plant protein 342.4e-0552.94Show/hide
Query:  KNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAEL
        K +  L K+E   GVY V  + EQ +VTVTGN+D   L+KKL K GKHAE+
Subjt:  KNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAEL

Q84J88 Heavy metal-associated isoprenylated plant protein 366.8e-0849.09Show/hide
Query:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRK
        GVY  NI+ +QQKVTV GNV+   LIKK++K G+HAELW ++ + +   + N +K
Subjt:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRK

Q9M8K5 Heavy metal-associated isoprenylated plant protein 321.9e-0539.44Show/hide
Query:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD
        L K+E   GV+   I+ EQ KVTV+G+VD + LIKKL K GKHAE+W +    +   ++ +         D
Subjt:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKD

Arabidopsis top hitse value%identityAlignment
AT1G23000.1 Heavy metal transport/detoxification superfamily protein4.8e-0952.54Show/hide
Query:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHN
        GV  V I  E QKVTV+G+VDS TLI KL+K GKHAELWS    Q++ ++      I N
Subjt:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHN

AT5G19090.1 Heavy metal transport/detoxification superfamily protein4.5e-0748.57Show/hide
Query:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK
        L K+E   GV+   I+ E  KVTV+GNVD + LIKKLLK GKHAE+W +  K       N + N+ NQ K
Subjt:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK

AT5G19090.2 Heavy metal transport/detoxification superfamily protein4.5e-0748.57Show/hide
Query:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK
        L K+E   GV+   I+ E  KVTV+GNVD + LIKKLLK GKHAE+W +  K       N + N+ NQ K
Subjt:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK

AT5G19090.3 Heavy metal transport/detoxification superfamily protein4.5e-0748.57Show/hide
Query:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK
        L K+E   GV+   I+ E  KVTV+GNVD + LIKKLLK GKHAE+W +  K       N + N+ NQ K
Subjt:  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMK

AT5G27690.1 Heavy metal transport/detoxification superfamily protein4.8e-0949.09Show/hide
Query:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRK
        GVY  NI+ +QQKVTV GNV+   LIKK++K G+HAELW ++ + +   + N +K
Subjt:  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGAATCAATCCCATTTGTTGAAGGTCGAGGTTAGTCGCGGTGTTTATAAGGTAAACATAAATTTTGAACAACAAAAGGTCACAGTCACAGGCAATGTGGATTC
AACCACTTTGATAAAGAAGCTTCTCAAATTAGGTAAGCATGCTGAACTTTGGTCTTCAACTTCCAAACAAGATGAAGGTGAAGAAGCAAACCTAAGAAAAAACATACACA
ACCAAATGAAAGATGCAGCAGATCCATCCTATAGCTTCCAAAATCAGTATATGTTTCCAATATTTGATAGAGAATTCAATAATCGGTTGCTATTTGAACATTACCTCGAT
CAAGGAAGTGGCATGTCGAGCAGTTTCCGGTATCATCCAGTCACTACAACTGCAGCACAGAAGGCAAGAGCTCACTGTGATAATGAAAAGCTAGGAAACCAGATGATATC
CATGGCTCATAATGTAGGTATTCAAGGCTATCAGTTCGACGGAGTTCCAGATGATGCACATGTTCGAGACTATCGATTTGGCATCTTTCCAGATCTCCCTTATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGAATCAATCCCATTTGTTGAAGGTCGAGGTTAGTCGCGGTGTTTATAAGGTAAACATAAATTTTGAACAACAAAAGGTCACAGTCACAGGCAATGTGGATTC
AACCACTTTGATAAAGAAGCTTCTCAAATTAGGTAAGCATGCTGAACTTTGGTCTTCAACTTCCAAACAAGATGAAGGTGAAGAAGCAAACCTAAGAAAAAACATACACA
ACCAAATGAAAGATGCAGCAGATCCATCCTATAGCTTCCAAAATCAGTATATGTTTCCAATATTTGATAGAGAATTCAATAATCGGTTGCTATTTGAACATTACCTCGAT
CAAGGAAGTGGCATGTCGAGCAGTTTCCGGTATCATCCAGTCACTACAACTGCAGCACAGAAGGCAAGAGCTCACTGTGATAATGAAAAGCTAGGAAACCAGATGATATC
CATGGCTCATAATGTAGGTATTCAAGGCTATCAGTTCGACGGAGTTCCAGATGATGCACATGTTCGAGACTATCGATTTGGCATCTTTCCAGATCTCCCTTATGCTTGA
Protein sequenceShow/hide protein sequence
MSKNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLD
QGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPDLPYA