; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X1
Genome locationchr05:3976304..3983402
RNA-Seq ExpressionLsi05G003100
SyntenyLsi05G003100
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149792.1 uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus]4.4e-13065.27Show/hide
Query:  MEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAA
        MEESGTVEA APQQS  P+                                        DS+PTVV PPIPVENS+T QPQ DIHPPSVLPD   IPSAA
Subjt:  MEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAA

Query:  PAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDD
        PAP+PSPN SD T+    + ++  +     IA+  + T D           S +L    STVMVDEVHYVSPNTFRNRRAAEQDAAR+AFE+ISKKTKDD
Subjt:  PAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDD

Query:  GFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFH
         FLLLREDLM CKSILSEYTDKM L+RPIYTTKH++GSV FFQSTLVFDGVVYTSD+ R+KKEAEQLAARAAILSL+ DA NPKSQK L +IIASKVRFH
Subjt:  GFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFH

Query:  ATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRAT-G
        A LQKVKDS+FSQ QPKSMPENTVE VAMTVN E KE+K A+LD G+VCGAIS+ CP TS F+PEF +TKP+ SSP +RLPIEFV STLEEPVG  AT G
Subjt:  ATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRAT-G

Query:  SKRRSKNKRKARKKLCIENGISITKSSFA
        SKR+SKNKRKARKKLC+EN ++   S  A
Subjt:  SKRRSKNKRKARKKLCIENGISITKSSFA

XP_008457066.1 PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo]3.2e-13374.32Show/hide
Query:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG
        DS+PTVV PPIPV+N  T Q Q +IHPPSVLPD  LIPSAAPAP+PSPN SDPT+    + ++  +     IA+  + T D           S  L    
Subjt:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG

Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR
        STV++DEVHYVSPNTFRNRRAAEQDAARIAFE+ISKKTKDD FLLLREDL+ CKSILSEYTDKM L+RPIYTTKHHKGSVP FQSTLVFDGVVYTSD+SR
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR

Query:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT
        +KKEAEQLAARAAILSL+ DA N KSQKTLA+IIASKVRFHA LQKVKDSHFSQIQPKSMPENTVE VAMTVN EDK VK A+ D+GVVCGAIS+ CP T
Subjt:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT

Query:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA
        S FRPEF STKPE SSP VRLPIEFVPSTLE PVGD A TGSKRRSKNKRKARKKLC+ENG++   S  A
Subjt:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA

XP_008457067.1 PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo]4.7e-13274.32Show/hide
Query:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG
        DS+PTVV PPIPV+N  T Q Q +IHPPSVLPD  LIPSAAPAP+PSPN SDPT+    + ++  +     IA+  + T D           S  L    
Subjt:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG

Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR
        STV++DEVHYVSPNTFRNRRAAEQDAARIAFE+ISKKTKDD FLLLREDL+ CKSILSEYTDKM L+RPIYTTKHHKGSVP FQSTLVFDGVVYTSD+SR
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR

Query:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT
        +KKEAEQLAARAAILSL+ DA N KSQKTLA+IIASKVRFHA LQKVKDSHFSQIQPKSMPENTVE VAMTVN EDK VK A+ D+GVVCGAIS+ CP T
Subjt:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT

Query:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA
        S FRPEF STKPE SSP VRLPIEFVPSTLE PVGD A TGSKRRSKNKRKARKKLC+ENG++   S  A
Subjt:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA

XP_011651405.1 double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus]6.3e-12965.27Show/hide
Query:  MEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAA
        MEESGTVEA APQQS  P+                                        DS+PTVV PPIPVENS+T QPQ DIHPPSVLPD   IPSAA
Subjt:  MEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAA

Query:  PAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDD
        PAP+PSPN SD T+    + ++  +     IA+  + T D           S +L    STVMVDEVHYVSPNTFRNRRAAEQDAAR+AFE+ISKKTKDD
Subjt:  PAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDD

Query:  GFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFH
         FLLLREDLM CKSILSEYTDKM L+RPIYTTKH++GSV FFQSTLVFDGVVYTSD+ R+KKEAEQLAARAAILSL+ DA NPKSQK L +IIASKVRFH
Subjt:  GFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFH

Query:  ATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRAT-G
        A LQKVKDS+FSQ QPKSMPENTVE VAMTVN E KE+K A+LD G+VCGAIS+ CP TS F+PEF +TKP+ SSP +RLPIEFV STLEEPVG  AT G
Subjt:  ATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRAT-G

Query:  SKRRSKNKRKARKKLCIENGISITKSSFA
        SKR+SKNKRKARKKLC+EN ++   S  A
Subjt:  SKRRSKNKRKARKKLCIENGISITKSSFA

XP_038897078.1 double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida]8.2e-15373.15Show/hide
Query:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA
        MMEESGTVEADAPQQS+                                         PPDS+PTVV PP+PV+NS T QP+ADIHPPSVLPDA L+PS 
Subjt:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA

Query:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNT-NDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTK
        APAPV SPNPSDPT+    + ++  +     I L  + T N+G          S  +    STVMVDEVHYVSPNTFRNR+AAEQDAARIAFE+ISKKTK
Subjt:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNT-NDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTK

Query:  DDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVR
        DDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTL FDGVVYTSDVSRSKKEAEQLAARAAILSL+GDARNPKSQKTLAEIIASKVR
Subjt:  DDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVR

Query:  FHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGD--R
        FHATLQKVKDSHFSQIQPKSMPEN VEHVAMTV +E+KEVK AILDNGVVCGAIS+VCP TSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGD  R
Subjt:  FHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGD--R

Query:  ATGSKRRSKNKRKARKKLCIENGISITKSSFA
        ATGSKRRSKNKRKARKKLC+EN ++   S  A
Subjt:  ATGSKRRSKNKRKARKKLCIENGISITKSSFA

TrEMBL top hitse value%identityAlignment
A0A1S3C485 uncharacterized protein LOC103496837 isoform X11.6e-13374.32Show/hide
Query:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG
        DS+PTVV PPIPV+N  T Q Q +IHPPSVLPD  LIPSAAPAP+PSPN SDPT+    + ++  +     IA+  + T D           S  L    
Subjt:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG

Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR
        STV++DEVHYVSPNTFRNRRAAEQDAARIAFE+ISKKTKDD FLLLREDL+ CKSILSEYTDKM L+RPIYTTKHHKGSVP FQSTLVFDGVVYTSD+SR
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR

Query:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT
        +KKEAEQLAARAAILSL+ DA N KSQKTLA+IIASKVRFHA LQKVKDSHFSQIQPKSMPENTVE VAMTVN EDK VK A+ D+GVVCGAIS+ CP T
Subjt:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT

Query:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA
        S FRPEF STKPE SSP VRLPIEFVPSTLE PVGD A TGSKRRSKNKRKARKKLC+ENG++   S  A
Subjt:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA

A0A1S3C4R2 uncharacterized protein LOC103496837 isoform X22.3e-13274.32Show/hide
Query:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG
        DS+PTVV PPIPV+N  T Q Q +IHPPSVLPD  LIPSAAPAP+PSPN SDPT+    + ++  +     IA+  + T D           S  L    
Subjt:  DSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSG

Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR
        STV++DEVHYVSPNTFRNRRAAEQDAARIAFE+ISKKTKDD FLLLREDL+ CKSILSEYTDKM L+RPIYTTKHHKGSVP FQSTLVFDGVVYTSD+SR
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSR

Query:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT
        +KKEAEQLAARAAILSL+ DA N KSQKTLA+IIASKVRFHA LQKVKDSHFSQIQPKSMPENTVE VAMTVN EDK VK A+ D+GVVCGAIS+ CP T
Subjt:  SKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTT

Query:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA
        S FRPEF STKPE SSP VRLPIEFVPSTLE PVGD A TGSKRRSKNKRKARKKLC+ENG++   S  A
Subjt:  SHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRA-TGSKRRSKNKRKARKKLCIENGISITKSSFA

A0A6J1F5U3 double-stranded RNA-binding protein 4-like isoform X16.0e-12564.1Show/hide
Query:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA
        M+EESGTVEA   QQSS                                         PPDS   VVP  IPVENS+TPQ ++D  PP VLPDA LIPS+
Subjt:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA

Query:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD
        A APV SP PSD T+    + ++  +     I L  + T D           S  +    STV+VDEVHYVSPNTFRNRRAAEQDAARIA E+ISKK KD
Subjt:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD

Query:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF
        DGF+LL EDLM CKSILSEYT KMSLKRP+YTTK H+GSVP FQSTLVFDGVVYT D+SRSKKEAEQLAARAAILSL+ DA NPKSQKTLAEIIASKVR 
Subjt:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF

Query:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG
        HA +QKVKDSH SQIQPK MP+NTVEHV  TVN EDKEV  AILDN V CGAIS++CPT SH  PEFRS KPEASSP  RLPIE VPST EEPVGDRATG
Subjt:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG

Query:  SKRRSKNKRKARKKLCIENGISITKSSFA
        SK+RSKNKRKARKKLC+EN ++   S  A
Subjt:  SKRRSKNKRKARKKLCIENGISITKSSFA

A0A6J1J4E3 double-stranded RNA-binding protein 4-like isoform X19.5e-12363.98Show/hide
Query:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA
        M+EESGTVEA   QQSS                                         PPDS P VVP  IPVE+S+TPQ ++D  PP VLP A LIPS+
Subjt:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA

Query:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD
        A APV SP PSD T+    + ++  +     I L  + T D           S  +    STV+VDEVHYVSPNTFRNRRAAEQDAARIA E+ISKK KD
Subjt:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD

Query:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF
        DGF+LL EDLM CKSILSEYT KMSLKRP+YTTK H+GSVP FQSTLVFDGVVYT D+SRSKKEAEQLAARAAILSL+ DA NPKSQKTLAEIIASKVR 
Subjt:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF

Query:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG
        HA +QKVKDSH SQIQPK MPENTVEHV  TVN EDKEV  AILDN V CGAIS++CPT SH  PE RS KP ASSP  RLPIE VPST EEPVGDRATG
Subjt:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG

Query:  SKRRSKNKRKARKKLCIENGIS
        +K+RSKNKRKARKKLC+EN ++
Subjt:  SKRRSKNKRKARKKLCIENGIS

A0A6J1J9P9 double-stranded RNA-binding protein 4-like isoform X31.6e-12264.44Show/hide
Query:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA
        M+EESGTVEA   QQSS                                         PPDS P VVP  IPVE+S+TPQ ++D  PP VLP A LIPS+
Subjt:  MMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSA

Query:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD
        A APV SP PSD T+    + ++  +     I L  + T D           S  +    STV+VDEVHYVSPNTFRNRRAAEQDAARIA E+ISKK KD
Subjt:  APAPVPSPNPSDPTRT---QGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKD

Query:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF
        DGF+LL EDLM CKSILSEYT KMSLKRP+YTTK H+GSVP FQSTLVFDGVVYT D+SRSKKEAEQLAARAAILSL+ DA NPKSQKTLAEIIASKVR 
Subjt:  DGFLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRF

Query:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG
        HA +QKVKDSH SQIQPK MPENTVEHV  TVN EDKEV  AILDN V CGAIS++CPT SH  PE RS KP ASSP  RLPIE VPST EEPVGDRATG
Subjt:  HATLQKVKDSHFSQIQPKSMPENTVEHVAMTVNEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATG

Query:  SKRRSKNKRKARKKLCIEN
        +K+RSKNKRKARKKLC+EN
Subjt:  SKRRSKNKRKARKKLCIEN

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 11.9e-1135.71Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLR-EDLMSCKSILSEYTDKMSLKRPIYTTKHHK--GSVPFFQSTLVFDGVVYTSD
        STV++D V Y S   F NR+AAEQ AA +A   ++K ++    +     +   CK++L EY  KM+   P+Y  +  +  G V  F  T+   G+ YT  
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLR-EDLMSCKSILSEYTDKMSLKRPIYTTKHHK--GSVPFFQSTLVFDGVVYTSD

Query:  VSRSKKEAEQLAARAAILSLNGDARN
         +R+KK+AE  A R A+L++  D +N
Subjt:  VSRSKKEAEQLAARAAILSLNGDARN

Q0DJA3 Double-stranded RNA-binding protein 31.5e-1134.06Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS
        STV+++   Y S   F NR+AAEQ AA +A   I K    +  +   ++   CK++L EY  KM+   P Y  TK   G  PF   T+   G+ Y    +
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS

Query:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK
        R+KK+AE  AAR A+L++ G +    +  T   ++  K
Subjt:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK

Q0IQN6 Double-stranded RNA-binding protein 81.9e-1134.06Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS
        STV+++   Y S   F NR+AAEQ AA +A   I K    +  +   ++   CK++L EY  KM+   P Y  TK   G  PF   T+   G+ Y    +
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS

Query:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK
        R+KK+AE  AAR A+L++ G +    +  T   ++  K
Subjt:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK

Q0IV63 Double-stranded RNA-binding protein 71.9e-1134.06Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS
        STV+++   Y S   F NR+AAEQ AA +A   I K    +  +   ++   CK++L EY  KM+   P Y  TK   G  PF   T+   G+ Y    +
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTDKMSLKRPIY-TTKHHKGSVPFFQSTLVFDGVVYTSDVS

Query:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK
        R+KK+AE  AAR A+L++ G +    +  T   ++  K
Subjt:  RSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK

Q6YW64 Double-stranded RNA-binding protein 46.3e-1539.44Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFI--SKKTKDDG---FLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYT
        STVMVD   + S    R  + AEQDAA++A++ +   K+T+ D    F L+ +D++  KSIL EYT K    +P Y+    +GSV  + S++ F G  YT
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFI--SKKTKDDG---FLLLREDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYT

Query:  SDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK
           +R+KK+AEQ AARAA+ SL        +  ++A+I+ SK
Subjt:  SDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASK

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein1.4e-1235.71Show/hide
Query:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLR-EDLMSCKSILSEYTDKMSLKRPIYTTKHHK--GSVPFFQSTLVFDGVVYTSD
        STV++D V Y S   F NR+AAEQ AA +A   ++K ++    +     +   CK++L EY  KM+   P+Y  +  +  G V  F  T+   G+ YT  
Subjt:  STVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLR-EDLMSCKSILSEYTDKMSLKRPIYTTKHHK--GSVPFFQSTLVFDGVVYTSD

Query:  VSRSKKEAEQLAARAAILSLNGDARN
         +R+KK+AE  A R A+L++  D +N
Subjt:  VSRSKKEAEQLAARAAILSLNGDARN

AT3G26932.1 dsRNA-binding protein 32.7e-0526.87Show/hide
Query:  YVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLL-LREDLMSCKSILSEYTDKMSLKRPIYTT-KHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQ
        + SP      R AE  AA +A   +S K         + ++    K++L E   +  L  P+YT+ +   G +P F  T+   G+ +  + +++KK+AE+
Subjt:  YVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLL-LREDLMSCKSILSEYTDKMSLKRPIYTT-KHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQ

Query:  LAARAAILSLNGDAR------NPKSQKTLAEIIA
         AA AA  SL    R        K Q+ +A +++
Subjt:  LAARAAILSLNGDAR------NPKSQKTLAEIIA

AT3G26932.2 dsRNA-binding protein 32.7e-0526.87Show/hide
Query:  YVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLL-LREDLMSCKSILSEYTDKMSLKRPIYTT-KHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQ
        + SP      R AE  AA +A   +S K         + ++    K++L E   +  L  P+YT+ +   G +P F  T+   G+ +  + +++KK+AE+
Subjt:  YVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLL-LREDLMSCKSILSEYTDKMSLKRPIYTT-KHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQ

Query:  LAARAAILSLNGDAR------NPKSQKTLAEIIA
         AA AA  SL    R        K Q+ +A +++
Subjt:  LAARAAILSLNGDAR------NPKSQKTLAEIIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGAAGAATCCGGTACGGTTGAAGCAGATGCGCCGCAACAATCTTCAGTTCCGACTGTTGTTTCGCCGGACTCAGCTCCGACTGTTGTTCCGCCGGACTCAGT
TCCGACTGTTGTTTCGCCGGACTCAGCTCCGACTGTTGTTCCGCCGGACTCAGTTCCGACTGTTGTTCCGCCGGACTCAATTCCGACTGTTGTTCCGCCTCCTATTCCGG
TGGAAAACTCCGATACTCCTCAGCCTCAAGCAGATATTCATCCTCCATCTGTGCTACCGGACGCAACTCTGATTCCGAGTGCGGCTCCAGCTCCGGTTCCGTCCCCGAAT
CCCTCTGATCCGACTCGCACTCAGGGCTATATTTTTGCATGGCCTTTTTGTCCTTCCATTGCCCTCAATGAACATAATACAAATGATGGAAAAAAGTCTAAGTCGTTTGC
TGAAGTGGAGAGTTTTGCATTGGACTTGTCTGGGTCAACTGTGATGGTTGATGAGGTACATTATGTGTCTCCTAATACGTTCCGTAATCGAAGGGCAGCTGAGCAAGATG
CTGCAAGAATTGCCTTTGAGTTCATATCAAAAAAGACAAAGGATGATGGCTTTCTTCTCCTTCGTGAGGATTTGATGTCATGCAAGTCCATTTTGTCTGAATATACGGAC
AAAATGAGTTTGAAAAGACCTATATACACAACAAAACACCATAAAGGCTCGGTTCCATTTTTCCAATCCACCTTGGTTTTTGATGGTGTTGTTTATACTAGTGATGTTAG
TAGGAGTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCTGCTATTCTTTCACTTAATGGAGATGCAAGAAATCCTAAATCACAAAAAACTCTTGCGGAAATCATTGCAT
CTAAAGTCAGATTCCATGCAACGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATGCCTGAAAATACAGTGGAACATGTTGCAATGACAGTT
AATGAAGAAGATAAAGAAGTTAAATACGCTATTTTGGACAATGGAGTGGTATGTGGTGCAATTTCAAAGGTTTGTCCAACAACTTCTCATTTTCGACCTGAATTTAGATC
AACAAAACCGGAAGCATCATCCCCTCCAGTGAGACTCCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTTGGTGATCGTGCAACTGGGTCTAAAAGGAGATCTA
AGAACAAGAGAAAGGCACGTAAGAAACTGTGTATAGAGAACGGTATAAGTATAACTAAATCTTCTTTTGCTAAGCAGGGTGGCAGCCGAGACGAGTCAAACCGCTCCTTG
CTCTGTAGCTCAATGACTGTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAACCCTCGCCTTCCGTTCACAGTCGAGCGCGAAAATATCCCGACATTCATTCATTCATTGATCGCCATTGGCTGACTGTTCCCATCCCATTTCACCAAATTCTTCT
CTTCGAATTCCATTACCCTCGATAACAGTGGATGATGATGGAAGAATCCGGTACGGTTGAAGCAGATGCGCCGCAACAATCTTCAGTTCCGACTGTTGTTTCGCCGGACT
CAGCTCCGACTGTTGTTCCGCCGGACTCAGTTCCGACTGTTGTTTCGCCGGACTCAGCTCCGACTGTTGTTCCGCCGGACTCAGTTCCGACTGTTGTTCCGCCGGACTCA
ATTCCGACTGTTGTTCCGCCTCCTATTCCGGTGGAAAACTCCGATACTCCTCAGCCTCAAGCAGATATTCATCCTCCATCTGTGCTACCGGACGCAACTCTGATTCCGAG
TGCGGCTCCAGCTCCGGTTCCGTCCCCGAATCCCTCTGATCCGACTCGCACTCAGGGCTATATTTTTGCATGGCCTTTTTGTCCTTCCATTGCCCTCAATGAACATAATA
CAAATGATGGAAAAAAGTCTAAGTCGTTTGCTGAAGTGGAGAGTTTTGCATTGGACTTGTCTGGGTCAACTGTGATGGTTGATGAGGTACATTATGTGTCTCCTAATACG
TTCCGTAATCGAAGGGCAGCTGAGCAAGATGCTGCAAGAATTGCCTTTGAGTTCATATCAAAAAAGACAAAGGATGATGGCTTTCTTCTCCTTCGTGAGGATTTGATGTC
ATGCAAGTCCATTTTGTCTGAATATACGGACAAAATGAGTTTGAAAAGACCTATATACACAACAAAACACCATAAAGGCTCGGTTCCATTTTTCCAATCCACCTTGGTTT
TTGATGGTGTTGTTTATACTAGTGATGTTAGTAGGAGTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCTGCTATTCTTTCACTTAATGGAGATGCAAGAAATCCTAAA
TCACAAAAAACTCTTGCGGAAATCATTGCATCTAAAGTCAGATTCCATGCAACGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATGCCTGA
AAATACAGTGGAACATGTTGCAATGACAGTTAATGAAGAAGATAAAGAAGTTAAATACGCTATTTTGGACAATGGAGTGGTATGTGGTGCAATTTCAAAGGTTTGTCCAA
CAACTTCTCATTTTCGACCTGAATTTAGATCAACAAAACCGGAAGCATCATCCCCTCCAGTGAGACTCCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTTGGT
GATCGTGCAACTGGGTCTAAAAGGAGATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATAGAGAACGGTATAAGTATAACTAAATCTTCTTTTGCTAAGCAGGG
TGGCAGCCGAGACGAGTCAAACCGCTCCTTGCTCTGTAGCTCAATGACTGTGAAGTGA
Protein sequenceShow/hide protein sequence
MMMEESGTVEADAPQQSSVPTVVSPDSAPTVVPPDSVPTVVSPDSAPTVVPPDSVPTVVPPDSIPTVVPPPIPVENSDTPQPQADIHPPSVLPDATLIPSAAPAPVPSPN
PSDPTRTQGYIFAWPFCPSIALNEHNTNDGKKSKSFAEVESFALDLSGSTVMVDEVHYVSPNTFRNRRAAEQDAARIAFEFISKKTKDDGFLLLREDLMSCKSILSEYTD
KMSLKRPIYTTKHHKGSVPFFQSTLVFDGVVYTSDVSRSKKEAEQLAARAAILSLNGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENTVEHVAMTV
NEEDKEVKYAILDNGVVCGAISKVCPTTSHFRPEFRSTKPEASSPPVRLPIEFVPSTLEEPVGDRATGSKRRSKNKRKARKKLCIENGISITKSSFAKQGGSRDESNRSL
LCSSMTVK