; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4269679..4272119
RNA-Seq ExpressionLsi05G003370
SyntenyLsi05G003370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457042.1 PREDICTED: uncharacterized protein LOC103496817 isoform X1 [Cucumis melo]8.0e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
XP_008457043.1 PREDICTED: uncharacterized protein LOC103496817 isoform X2 [Cucumis melo]8.0e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
XP_008457044.1 PREDICTED: uncharacterized protein LOC103496817 isoform X3 [Cucumis melo]8.0e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
XP_038904403.1 uncharacterized protein LOC120090765 isoform X1 [Benincasa hispida]5.0e-8892.67Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MASRLFLLFLFTISLSIPSHARPCKSLF+SFSL RHP+LDSR PFSQMAIIVDITEFK SSFSSS+DPLFPSL  DSDILRFDLPRPR VAAATQTHSLQ
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSVN
        HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG+ SSVYDD  EEDDLSDDNKENIKKMGYIKIPDDVAPVKSV+
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSVN
XP_038904410.1 uncharacterized protein LOC120090765 isoform X2 [Benincasa hispida]6.5e-8893.16Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MASRLFLLFLFTISLSIPSHARPCKSLF+SFSL RHP+LDSR PFSQMAIIVDITEFK SSFSSS+DPLFPSL  DSDILRFDLPRPR VAAATQTHSLQ
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFG+ SSVYDD  EEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
TrEMBL top hitse value%identityAlignment
A0A0A0L741 Uncharacterized protein5.1e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSS DPLFPS+A  +DILRFDLPRP  V+A+T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E+EDDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
A0A1S3C467 uncharacterized protein LOC103496817 isoform X13.9e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
A0A1S3C4K4 uncharacterized protein LOC103496817 isoform X33.9e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
A0A1S3C4P1 uncharacterized protein LOC103496817 isoform X23.9e-7885.86Show/hide
Query:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ
        MAS LFLLFLFTIS SIPS ARPCKSLF+SFSLHRH TLDS  PFSQMAIIVDITEFK SSFSSSSDPLFPS+A  +DILRFDLPRP  V+A T     Q
Subjt:  MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFK-SSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQ

Query:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        H PYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGH SSVYDDF E++DDLSDDNKENIKKMGYI IPDDVAPVKSV
Subjt:  HLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDF-EEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
A0A6J1GC62 uncharacterized protein LOC1114528242.2e-6577.6Show/hide
Query:  RLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFKS--SFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQHL
        RLFLLFL T+SL I S ARPCKSLFVSFS+HRHPTLDSRDPFS+MAIIVDITE KS  S SSSSD LF    GD D+LR DLPR RA   A+Q HSLQ L
Subjt:  RLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFKS--SFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQHL

Query:  P----YDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
        P    YDF+SLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSL + QF H SSVYDD  EE D SDDNKENIKKMGY+KIP+DVA VKSV
Subjt:  P----YDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65720.1 unknown protein2.2e-1735.86Show/hide
Query:  MASRLFLLFLFTI----SLSIPSHARPCKSLFV-SFSLH---RHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAA
        M S  +L F   +    S++  + ARPCK+  + S+SL     +P L+S    ++   +  I                       ++ F + R       
Subjt:  MASRLFLLFLFTI----SLSIPSHARPCKSLFV-SFSLH---RHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAA

Query:  TQTHSLQHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKE--NIKKMGYIKIPDDV-APVK
            SL  +  +  S RDRT+DILSVVVALLFGVGCGALTAATMYL ++L   +       YD  EEEDD  +D  +  ++KK+GY+KIP    APVK
Subjt:  TQTHSLQHLPYDFTSLRDRTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKE--NIKKMGYIKIPDDV-APVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCGTCTCTTTCTCCTCTTTCTCTTCACAATTTCCCTCTCAATTCCCTCTCATGCTCGCCCTTGCAAATCCCTCTTCGTTTCCTTTTCCCTTCACCGCCACCC
AACCCTTGATTCCCGCGATCCCTTTTCCCAGATGGCCATTATCGTCGACATCACTGAGTTCAAATCCTCCTTCTCCTCTTCTTCCGATCCCCTTTTCCCTTCCCTCGCCG
GCGACTCTGACATCCTCCGCTTCGACCTCCCTCGTCCTAGGGCTGTTGCAGCAGCAACCCAAACCCACTCCCTTCAACATCTCCCTTACGACTTCACCTCTCTCCGTGAT
CGCACCAAGGATATCCTCAGCGTTGTTGTCGCTTTGCTCTTCGGCGTTGGCTGTGGCGCTCTCACTGCTGCCACTATGTATTTGGCCTACTCATTGTTCGCTGGCCAATT
TGGGCATCACTCCTCTGTGTATGACGACTTTGAGGAGGAAGATGATCTCAGTGATGATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCCCTGACGACGTTG
CCCCGGTTAAATCAGTGAATGAGATATGGAGAGACAACCGTCTTATGAAAGTTACGGTTTTTATGTGGAGTAGGTTGCAGGAATCCATCTCCAGAATAGATGAGAAATAT
CTCAGGTTTGTACCCATAGATCTTGAGAACAATATCTTGAAAAGCCAAAGCAATGACAGAACATTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGTGAATCGTGATGGTCAATTGGTGAAAGGGAAGGGAAGGGAAGGATAGAGAGGAAAGAAAAGATAGGACTGAGTTGTGAGAGAGAGAAAGAAAGTCTCCTTCCTTCCTT
CCTTCTCCCAAAGTTTTCCCCATTCCCCATTCCTCGTTTCTTCAAACCTTCATCCATGGCGTCGCGTCTCTTTCTCCTCTTTCTCTTCACAATTTCCCTCTCAATTCCCT
CTCATGCTCGCCCTTGCAAATCCCTCTTCGTTTCCTTTTCCCTTCACCGCCACCCAACCCTTGATTCCCGCGATCCCTTTTCCCAGATGGCCATTATCGTCGACATCACT
GAGTTCAAATCCTCCTTCTCCTCTTCTTCCGATCCCCTTTTCCCTTCCCTCGCCGGCGACTCTGACATCCTCCGCTTCGACCTCCCTCGTCCTAGGGCTGTTGCAGCAGC
AACCCAAACCCACTCCCTTCAACATCTCCCTTACGACTTCACCTCTCTCCGTGATCGCACCAAGGATATCCTCAGCGTTGTTGTCGCTTTGCTCTTCGGCGTTGGCTGTG
GCGCTCTCACTGCTGCCACTATGTATTTGGCCTACTCATTGTTCGCTGGCCAATTTGGGCATCACTCCTCTGTGTATGACGACTTTGAGGAGGAAGATGATCTCAGTGAT
GATAACAAGGAGAACATTAAGAAGATGGGTTACATCAAGATCCCTGACGACGTTGCCCCGGTTAAATCAGTGAATGAGATATGGAGAGACAACCGTCTTATGAAAGTTAC
GGTTTTTATGTGGAGTAGGTTGCAGGAATCCATCTCCAGAATAGATGAGAAATATCTCAGGTTTGTACCCATAGATCTTGAGAACAATATCTTGAAAAGCCAAAGCAATG
ACAGAACATTTTCTTAA
Protein sequenceShow/hide protein sequence
MASRLFLLFLFTISLSIPSHARPCKSLFVSFSLHRHPTLDSRDPFSQMAIIVDITEFKSSFSSSSDPLFPSLAGDSDILRFDLPRPRAVAAATQTHSLQHLPYDFTSLRD
RTKDILSVVVALLFGVGCGALTAATMYLAYSLFAGQFGHHSSVYDDFEEEDDLSDDNKENIKKMGYIKIPDDVAPVKSVNEIWRDNRLMKVTVFMWSRLQESISRIDEKY
LRFVPIDLENNILKSQSNDRTFS