; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTATA-binding protein-associated factor BTAF1
Genome locationchr05:4362221..4363509
RNA-Seq ExpressionLsi05G003450
SyntenyLsi05G003450
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0017025 - TBP-class protein binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650600.1 hypothetical protein Csa_010877 [Cucumis sativus]4.8e-5896.09Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVM+LQKFKVSIANAVINSENASMKTMNTDQLLDLFT+AE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

TYK01591.1 TATA-binding protein-associated factor BTAF1 [Cucumis melo var. makuwa]5.7e-5997.66Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

XP_008457028.1 PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis melo]5.7e-5997.66Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

XP_031739538.1 LOW QUALITY PROTEIN: TATA-binding protein-associated factor BTAF1-like [Cucumis sativus]4.8e-5896.09Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVM+LQKFKVSIANAVINSENASMKTMNTDQLLDLFT+AE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

XP_038899635.1 TATA-binding protein-associated factor BTAF1 [Benincasa hispida]4.4e-5997.66Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAE+SKKGAAS SSKQSDGNFDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

TrEMBL top hitse value%identityAlignment
A0A0A0LAU8 Uncharacterized protein2.3e-5896.09Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVM+LQKFKVSIANAVINSENASMKTMNTDQLLDLFT+AE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

A0A1S3C457 TATA-binding protein-associated factor BTAF12.8e-5997.66Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

A0A5D3BP91 TATA-binding protein-associated factor BTAF12.8e-5997.66Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAE+SKKGAASASSKQSDG+FDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

A0A6J1CP47 TATA-binding protein-associated factor BTAF18.3e-5692.19Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVIN+ENASMKTMNTDQLLDLFTSAE++ K  AS+SS QSDGNFDGEVKA+GGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEYNLNQFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

A0A6J1F4H6 TATA-binding protein-associated factor BTAF12.4e-5591.41Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQRKVVNVHRLIMRGT+EEKVM+LQKFKVS+ANAVINSENASMKTMNTDQLLDLFTSAE+S+KGA S SSKQSD NFDGEVKAMGGKKGLKAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LGGLEELWDQSQYTEEY+L+QFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

SwissProt top hitse value%identityAlignment
B0XPE7 TATA-binding protein-associated factor mot14.9e-2953.44Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFT---SAESSKKGAASASSKQSDGNFDGEVKAMGGKKGL
        MDRAHR+GQ+KVVNV+RLI RGTLEEK++NLQ+FK+ +A+ V+N +NA + TM+TDQLLDLF    +AE+++K + +A ++    + DG VK    +KG 
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFT---SAESSKKGAASASSKQSDGNFDGEVKAMGGKKGL

Query:  KAILGGLEELWDQSQYTEEYNLNQFLEKLNG
        K  L  L ELWD  QY EEYNL+ FL  + G
Subjt:  KAILGGLEELWDQSQYTEEYNLNQFLEKLNG

B5BT18 TATA-binding protein-associated factor BTAF12.4e-4475Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQ++VVNVHRLIMRGTLEEKVM+LQKFKVS+AN VIN+ENASMKTMNTDQLLDLF SAE+SKKG  S+     D +     +  G  KG+KAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LG LEELWDQSQYTEEYNL+QFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

O14981 TATA-binding protein-associated factor 1726.0e-2752.38Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHR+GQ++VVNV+RLI RGTLEEK+M LQKFK++IAN VI+ EN+S+++M TDQLLDLFT  +  K   A  S+               GK  +K+I
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKL
        L  L +LWDQ QY  EY+L  F+  L
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKL

P32333 TATA-binding protein-associated factor MOT12.8e-2448.09Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLF-----TSAESSKKGAASASSKQSDGNFDGEVKAMGGKK
        MDRAHR+GQ+KVVNV+R+I +GTLEEK+M LQKFK++IA+ V+N +N+ + +M+T QLLDLF     TS ++ +K    + + +   +   E    G   
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLF-----TSAESSKKGAASASSKQSDGNFDGEVKAMGGKK

Query:  GLKAILGGLEELWDQSQYTEEYNLNQFLEKL
          K  LG L+ELWD SQY EEYNL+ F++ L
Subjt:  GLKAILGGLEELWDQSQYTEEYNLNQFLEKL

Q4WJI7 TATA-binding protein-associated factor mot14.9e-2953.44Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFT---SAESSKKGAASASSKQSDGNFDGEVKAMGGKKGL
        MDRAHR+GQ+KVVNV+RLI RGTLEEK++NLQ+FK+ +A+ V+N +NA + TM+TDQLLDLF    +AE+++K + +A ++    + DG VK    +KG 
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFT---SAESSKKGAASASSKQSDGNFDGEVKAMGGKKGL

Query:  KAILGGLEELWDQSQYTEEYNLNQFLEKLNG
        K  L  L ELWD  QY EEYNL+ FL  + G
Subjt:  KAILGGLEELWDQSQYTEEYNLNQFLEKLNG

Arabidopsis top hitse value%identityAlignment
AT1G02670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.0e-0541.94Show/hide
Query:  DRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVI-NSENASMKTMNTDQLLDLF
        DR HR+GQ K V V R IM  T+EEK++ LQK K  +  + + +SE A ++ +  D +  LF
Subjt:  DRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVI-NSENASMKTMNTDQLLDLF

AT2G18760.1 chromatin remodeling 84.3e-0434.21Show/hide
Query:  DRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASS
        +RA R+GQ+K V V+RLI RGT+EEKV + Q +K  + N ++ +     +      + DLF   +     A++ +S
Subjt:  DRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASS

AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE)2.3e-0545.61Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQ
        M RAHRLGQ   V ++RLI RGT+EE++M L K K+ + + V+      +KT N +Q
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQ

AT3G54280.1 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases1.7e-4575Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQ++VVNVHRLIMRGTLEEKVM+LQKFKVS+AN VIN+ENASMKTMNTDQLLDLF SAE+SKKG  S+     D +     +  G  KG+KAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LG LEELWDQSQYTEEYNL+QFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG

AT3G54280.2 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases1.7e-4575Show/hide
Query:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI
        MDRAHRLGQ++VVNVHRLIMRGTLEEKVM+LQKFKVS+AN VIN+ENASMKTMNTDQLLDLF SAE+SKKG  S+     D +     +  G  KG+KAI
Subjt:  MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAI

Query:  LGGLEELWDQSQYTEEYNLNQFLEKLNG
        LG LEELWDQSQYTEEYNL+QFL KLNG
Subjt:  LGGLEELWDQSQYTEEYNLNQFLEKLNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGCCCACAGGTTGGGCCAGCGGAAGGTTGTAAACGTCCATCGACTCATAATGCGTGGAACATTAGAAGAAAAAGTTATGAACCTTCAAAAGTTTAAAGTTTC
AATTGCTAATGCTGTCATCAATTCCGAGAATGCCAGTATGAAAACGATGAATACTGATCAATTGCTTGATCTTTTCACATCTGCCGAAAGCTCCAAAAAGGGAGCGGCGT
CAGCGTCATCTAAGCAGTCAGATGGCAACTTTGATGGAGAGGTAAAAGCAATGGGTGGAAAGAAGGGTCTGAAAGCCATCCTTGGAGGACTGGAGGAACTTTGGGACCAA
TCTCAATACACTGAAGAGTACAATCTTAATCAGTTCTTAGAAAAGCTTAATGGCTGA
mRNA sequenceShow/hide mRNA sequence
TGCTAATTCTCCATCTGCCCCTAATGAATATTATGGCAGCGCAATGGACAGAGCCCACAGGTTGGGCCAGCGGAAGGTTGTAAACGTCCATCGACTCATAATGCGTGGAA
CATTAGAAGAAAAAGTTATGAACCTTCAAAAGTTTAAAGTTTCAATTGCTAATGCTGTCATCAATTCCGAGAATGCCAGTATGAAAACGATGAATACTGATCAATTGCTT
GATCTTTTCACATCTGCCGAAAGCTCCAAAAAGGGAGCGGCGTCAGCGTCATCTAAGCAGTCAGATGGCAACTTTGATGGAGAGGTAAAAGCAATGGGTGGAAAGAAGGG
TCTGAAAGCCATCCTTGGAGGACTGGAGGAACTTTGGGACCAATCTCAATACACTGAAGAGTACAATCTTAATCAGTTCTTAGAAAAGCTTAATGGCTGAAGTCCTTGTG
AACGCACCATGTACAAAGTGTATATAATGTGGGAGATGATTGTAAGGCCCAAATTTTGACAGTTTAACCAATAGGTTTCAGTCTTCCCTAAGACTCTCTTCCGTTCCAAT
TACTCCCCCTTTTTCCCCAGGGGCTCGTGTAGCTTTTTTCACGAATGGTCGTAGAGTATAGGGCGACGATTTACAAGAGGTGTAACGTAAGGTCTCACGATTTATGCACT
TTCAGGAATGGGAAGGAAAGAGAATTTGTATATGGCGGATATTGTATATACAATTCATTTCATCTTTTAAATGAAATCCATTCTTCCATATAGCTTATTTTCAATGGAAC
ATTGTCAAGCTTTTGCTTGCAATTGTAAGATT
Protein sequenceShow/hide protein sequence
MDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLLDLFTSAESSKKGAASASSKQSDGNFDGEVKAMGGKKGLKAILGGLEELWDQ
SQYTEEYNLNQFLEKLNG