; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4600812..4603007
RNA-Seq ExpressionLsi05G003620
SyntenyLsi05G003620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606995.1 hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5882.35Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MALNLHC  LSA F+S+H + +  RS   NRTSKLS+NS KF  IRSSA+SN+QLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVH+GGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        MDTP+SGKV QYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

XP_008457102.1 PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo]1.4e-5883.21Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MA NLHCYH S  F+SLH    VLRS     TSK  SNS KFL IR SA+SNNQLTLRTCRNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH GGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
        MDTP+SGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD

XP_011651192.1 uncharacterized protein LOC101208221 [Cucumis sativus]9.8e-6589.05Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MA NLHCYH SA F+SLH KF VLRSD  NRTSKLSSNS K L IR SA+SNNQLTLRTCRNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVHSGGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
        MDTP+SGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD

XP_022143294.1 uncharacterized protein LOC111013199 [Momordica charantia]2.1e-5983.33Show/hide
Query:  MALNLHCYHLSACFLSLHPK--FQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSG
        MALNLHCY  S  FL L PK   +VLRSDR NR SKLS++S KF  IR+SA+SNNQLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVH+G
Subjt:  MALNLHCYHLSACFLSLHPK--FQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSG

Query:  GTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        GTMDTP+SGKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

XP_038879129.1 uncharacterized protein LOC120071126 [Benincasa hispida]1.7e-6994.16Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MALNLHCYH SA FLSLHPK QV+RSDR NRTSKLSSNS KFL IRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
        MDTP+SGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD

TrEMBL top hitse value%identityAlignment
A0A0A0L8V5 Uncharacterized protein4.7e-6589.05Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MA NLHCYH SA F+SLH KF VLRSD  NRTSKLSSNS K L IR SA+SNNQLTLRTCRNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVHSGGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
        MDTP+SGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD

A0A1S3C5F2 uncharacterized protein LOC1034968576.6e-5983.21Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MA NLHCYH S  F+SLH    VLRS     TSK  SNS KFL IR SA+SNNQLTLRTCRNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH GGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
        MDTP+SGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDDD

A0A6J1CNX1 uncharacterized protein LOC1110131991.0e-5983.33Show/hide
Query:  MALNLHCYHLSACFLSLHPK--FQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSG
        MALNLHCY  S  FL L PK   +VLRSDR NR SKLS++S KF  IR+SA+SNNQLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVH+G
Subjt:  MALNLHCYHLSACFLSLHPK--FQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSG

Query:  GTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        GTMDTP+SGKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

A0A6J1G9P5 uncharacterized protein LOC1114522271.1e-5882.35Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MALNLHC  LSA F+S H + +  RS   NRTSKLS+NS KF  IRSSA+SN+QLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVH+GGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        MDTP+SGKV QYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

A0A6J1K626 uncharacterized protein LOC1114926454.3e-5881.62Show/hide
Query:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT
        MALNLHC  LSA F+S H + +  RS   NRTSKLS+NS K   IRSSA+S+NQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVH+GGT
Subjt:  MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGT

Query:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        MDTP+SGKV QYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  MDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein3.1e-0836.14Show/hide
Query:  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD
        + C+ CK  +    N   +CRFH + F      + KR +E        D P + K   ++ CCG+EDP  PGC  +PH SYDD
Subjt:  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHSGGTMDTPNSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD

AT5G38060.1 unknown protein6.6e-4363.57Show/hide
Query:  YHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSG
        + LS+   S+        S +  +T KL  NS +F    +++ S+   TLRTC+NCK QFDP LN+PRACRFHTAHFGGETKRKFESV++GGTMDTPNSG
Subjt:  YHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSG

Query:  KVFQYWHCCGSEDPFDPGCTASPHSSYDD
        KV QYWHCCGSEDPFD GCTASPH++YDD
Subjt:  KVFQYWHCCGSEDPFDPGCTASPHSSYDD

AT5G38060.2 unknown protein4.3e-3455.81Show/hide
Query:  YHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSG
        + LS+   S+        S +  +T KL  NS +F    +++ S+   TLRTC+NCK QFDP LN+PRACRFHTAHFG            GGTMDTPNSG
Subjt:  YHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSG

Query:  KVFQYWHCCGSEDPFDPGCTASPHSSYDD
        KV QYWHCCGSEDPFD GCTASPH++YDD
Subjt:  KVFQYWHCCGSEDPFDPGCTASPHSSYDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAATCTCCATTGTTACCATTTATCAGCTTGCTTCCTTTCTCTTCATCCAAAATTTCAAGTTCTTCGCTCCGATCGTCAGAATCGCACTTCGAAACTGAGTTC
AAATTCGGCCAAATTCCTCGGAATTCGAAGCTCCGCGGACTCGAACAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCTCCCTCAATCATC
CACGGGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACTCTGGCAAAGTTTTT
CAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTCGATCCAGGATGTACTGCTTCTCCGCACTCATCCTACGACGATGATTAG
mRNA sequenceShow/hide mRNA sequence
TACAGCTATTCGATTATTTTTGTTACAGATTCAATCATTTCGGAGCTATGGCTCTCAATCTCCATTGTTACCATTTATCAGCTTGCTTCCTTTCTCTTCATCCAAAATTT
CAAGTTCTTCGCTCCGATCGTCAGAATCGCACTTCGAAACTGAGTTCAAATTCGGCCAAATTCCTCGGAATTCGAAGCTCCGCGGACTCGAACAATCAATTGACGCTTAG
AACTTGCAGGAATTGCAAGGCGCAATTTGATCCCTCCCTCAATCATCCACGGGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTG
TACACTCAGGAGGAACAATGGACACTCCAAACTCTGGCAAAGTTTTTCAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTCGATCCAGGATGTACTGCTTCTCCGCAC
TCATCCTACGACGATGATTAGTACGAAAGTGGAGAGCAGGAGACTTAGTGCAGCCAGTATTACTCGTTTGGAATATCCTTTTTGGTCTTGGGCGTTATATAGTCTTTTCA
GTCTTTTCAATTAGTTAGTCTTTTCTTTTGTGTATTTCAGTGCAAAATTTTTATGGGTGGAAGAGTAAAATCTCTTAAATTTGTACAAAACATTGCTATTTTTTTTTTTA
ATTCTTTTTCTTCGATGGTAGACTTTGCCATATTAATAACTTCTTTAAGTTAGCGAGATATGTTATGAGATGAATTACTTAAAATACCTATATAAATCAATTGAATTTAC
CAAATGTGCACCAATAATAAAAGGATATTTATTTAAATACATCG
Protein sequenceShow/hide protein sequence
MALNLHCYHLSACFLSLHPKFQVLRSDRQNRTSKLSSNSAKFLGIRSSADSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNSGKVF
QYWHCCGSEDPFDPGCTASPHSSYDDD