; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4658700..4665048
RNA-Seq ExpressionLsi05G003660
SyntenyLsi05G003660
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457016.1 PREDICTED: uncharacterized protein LOC103496795 [Cucumis melo]4.2e-3678.1Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ
        LV  + +TSLTLYARQ RLP LGTNVDNF LY VNDEKRDALSPRE+IGSKQVRHFLLCKKQGTSH LL NEK S++ E+EKG   WK WLNKSL+Y IQ
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ

Query:  SHCML
        SHCML
Subjt:  SHCML

XP_011651392.1 uncharacterized protein LOC105434881 [Cucumis sativus]6.6e-4282.86Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ
        LV  + +TSLTLYARQARLP LGTNVDNFIL+CVNDEKRDALSPRE+IGSKQVRHFLLCKKQG+ H LL NEK+S++ EEEKGRNHWK WLNKSLSY IQ
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ

Query:  SHCML
        SHCML
Subjt:  SHCML

XP_022948336.1 uncharacterized protein LOC111452042 [Cucurbita moschata]8.1e-2466.32Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL
        LV  + +T+LT YAR ARLPTLGTNVDNF+LYCVND   DALS RE IG+KQVRHFLLCKK+GTSH  LP         +E G+N+WKTWL KSL
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL

XP_023525569.1 uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo]1.8e-2365.26Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL
        LV  + +T+LT YAR ARLPTLGTNVDNF+LYCVND   DALS RE IG+KQVRHFLLC+K+GTSH  LP         +E G+N+WKTWL KSL
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL

XP_038907220.1 uncharacterized protein LOC120092999 [Benincasa hispida]7.5e-4689.52Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ
        LV  + +TSLTLYARQARLPTLGTNVDNFILYCVNDE RDALSPRETIGSKQVRHFLLCKKQGTSH LLPNEKISK+MEEEKGRN+WKTWLNKS SY IQ
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ

Query:  SHCML
        SHCML
Subjt:  SHCML

TrEMBL top hitse value%identityAlignment
A0A0A0L707 Uncharacterized protein3.2e-4282.86Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ
        LV  + +TSLTLYARQARLP LGTNVDNFIL+CVNDEKRDALSPRE+IGSKQVRHFLLCKKQG+ H LL NEK+S++ EEEKGRNHWK WLNKSLSY IQ
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ

Query:  SHCML
        SHCML
Subjt:  SHCML

A0A1S3C4I6 uncharacterized protein LOC1034967952.0e-3678.1Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ
        LV  + +TSLTLYARQ RLP LGTNVDNF LY VNDEKRDALSPRE+IGSKQVRHFLLCKKQGTSH LL NEK S++ E+EKG   WK WLNKSL+Y IQ
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYKIQ

Query:  SHCML
        SHCML
Subjt:  SHCML

A0A6J1CNZ1 uncharacterized protein LOC1110132142.4e-2171.26Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIG-SKQVRHFLLCKKQGTSHPLLPNEK-ISKKMEEEKGRN
        LV  + +T+L  YARQARLP LGTNVDNFILYCVND   +ALSPRETIG SKQVRHFLLCKKQGTSH    ++K +S +MEEEK RN
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIG-SKQVRHFLLCKKQGTSHPLLPNEK-ISKKMEEEKGRN

A0A6J1G8Y8 uncharacterized protein LOC1114520423.9e-2466.32Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL
        LV  + +T+LT YAR ARLPTLGTNVDNF+LYCVND   DALS RE IG+KQVRHFLLCKK+GTSH  LP         +E G+N+WKTWL KSL
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL

A0A6J1K9B8 uncharacterized protein LOC1114928581.3e-2261.62Show/hide
Query:  SRSALVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL
        ++  LV  + +T+LT YAR ARLP LGTNVDNF+LYCVND   DALS RE IG+KQVRHFLLCKK+GTS   LP         +E G+N+WKTWL KSL
Subjt:  SRSALVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein3.1e-1340.87Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNH-------------W
        LV  +  T+L  YAR+ RLP LG++ ++F+ YC       ALSP E IGS  VR+F+LCKK+       P E   KK+EE+KGR++             +
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNH-------------W

Query:  KTWLNKSLSYKIQSH
        K W+NKSL  K+ +H
Subjt:  KTWLNKSLSYKIQSH

AT1G70780.1 unknown protein1.9e-1039.13Show/hide
Query:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYC--VNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRN-----------HW
        LV  +  T+L  YAR+ RLP LG++ ++F+LYC  V  E   ALS  + IGS   R+F+LC+K        P E   KK+EE  GR+             
Subjt:  LVLVLKQTSLTLYARQARLPTLGTNVDNFILYC--VNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRN-----------HW

Query:  KTWLNKSLSYKIQSH
        K W+NKS + K+ SH
Subjt:  KTWLNKSLSYKIQSH

AT5G37730.1 unknown protein9.3e-1044.58Show/hide
Query:  TSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNH-WKT
        T+L  YARQ R+P LG +VDNFI Y +N    + L P+E IGS  V +FL+CKK+       P EK+    E      H WKT
Subjt:  TSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNH-WKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTGAAAGGATGGAGATATGTATGGATCCAAAGTCGAGAGAAGTTTTTGTTTCTCAAGATGTGGTGTTCGACGAAGAAGATGAACCTCAGTCTTATAATGAAGC
TAAAGGTGATGGCAAAGTTGGAATTAATAGTTTTCGAGATGCTTTGTCTATTCGTTTTGAAATGAAAAGTCTTGGTGAAGCAAGATGTTTTCTTGGTTTGGAGGTTGAAA
AGTCAGATGGATACTTTATCTCACATAAAGATTGGGTTGGTAACATAAATGACAGATATTACGTTCCACAACAGTATACTATTTCAAAACAGGTTCAGGGGCGATTTCAT
GGTGTACCGAGTGCTTCGTCTCGATCAAGATCAGCCCTCGTTCTCGTCCTCAAGCAAACTTCTCTTACATTATATGCTCGCCAAGCTCGTCTTCCTACTCTTGGAACTAA
TGTTGATAACTTTATTCTCTATTGTGTTAATGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAACTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAGAAGC
AAGGGACTTCACATCCATTATTGCCTAATGAGAAAATCTCAAAGAAAATGGAAGAAGAAAAGGGGAGAAATCATTGGAAGACATGGCTCAACAAATCCTTGAGTTACAAA
ATTCAATCTCATTGCATGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGTGAAAGGATGGAGATATGTATGGATCCAAAGTCGAGAGAAGTTTTTGTTTCTCAAGATGTGGTGTTCGACGAAGAAGATGAACCTCAGTCTTATAATGAAGC
TAAAGGTGATGGCAAAGTTGGAATTAATAGTTTTCGAGATGCTTTGTCTATTCGTTTTGAAATGAAAAGTCTTGGTGAAGCAAGATGTTTTCTTGGTTTGGAGGTTGAAA
AGTCAGATGGATACTTTATCTCACATAAAGATTGGGTTGGTAACATAAATGACAGATATTACGTTCCACAACAGTATACTATTTCAAAACAGGTTCAGGGGCGATTTCAT
GGTGTACCGAGTGCTTCGTCTCGATCAAGATCAGCCCTCGTTCTCGTCCTCAAGCAAACTTCTCTTACATTATATGCTCGCCAAGCTCGTCTTCCTACTCTTGGAACTAA
TGTTGATAACTTTATTCTCTATTGTGTTAATGATGAAAAAAGGGATGCTCTAAGCCCAAGGGAAACTATAGGATCAAAGCAAGTAAGGCACTTTTTGCTATGTAAGAAGC
AAGGGACTTCACATCCATTATTGCCTAATGAGAAAATCTCAAAGAAAATGGAAGAAGAAAAGGGGAGAAATCATTGGAAGACATGGCTCAACAAATCCTTGAGTTACAAA
ATTCAATCTCATTGCATGCTGTAATATTTTTGTAATATCGAAACAAAGATTGATGGACATGTTTTATAAATAACGAAGATCAGTTCTTAAGTCCTAACTTTCGTTGTAAA
ACATGGACGTGTGTATATAATGAATAAATGTTTTTATACAACCCTAGCTAGCATACATTTAAGATAACTCTTAGTTTGTCAATCCGAGTATGATCGATTAGTGGATAAAG
GCACTAATTACTATCTCAAAGATTGATAGTTCGATTCTTCATCTATGTCATTGTTGAGTTTAATGAAAAGATAGTGTTTAGTATACTAGTATTAAACATAATTTGAG
Protein sequenceShow/hide protein sequence
MSRERMEICMDPKSREVFVSQDVVFDEEDEPQSYNEAKGDGKVGINSFRDALSIRFEMKSLGEARCFLGLEVEKSDGYFISHKDWVGNINDRYYVPQQYTISKQVQGRFH
GVPSASSRSRSALVLVLKQTSLTLYARQARLPTLGTNVDNFILYCVNDEKRDALSPRETIGSKQVRHFLLCKKQGTSHPLLPNEKISKKMEEEKGRNHWKTWLNKSLSYK
IQSHCML