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Lsi05G003670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4665172..4665516
RNA-Seq ExpressionLsi05G003670
SyntenyLsi05G003670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032826.1 hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa]1.1e-2962.5Show/hide
Query:  MATLATPSMTTII--LLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSE-FMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLG
        MA L+TPS+ TII  LLL+LI +G TVN T   ASC+ SHS+KCHLVR+++AD +  MME E+ RMLLD+NK+  P TG  NK +   CGRPPRYDSCLG
Subjt:  MATLATPSMTTII--LLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSE-FMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLG

Query:  QKSQTPPGEKCGTYKRVPCG
        +K  TPP EKC  YKRVPCG
Subjt:  QKSQTPPGEKCGTYKRVPCG

KAE8649335.1 hypothetical protein Csa_014907 [Cucumis sativus]2.0e-1550Show/hide
Query:  TLATPSMTTIILLLLLIPT--GSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ
        T + P+M  +IL LL  PT   +TVN T S  C G  SE C LV +E  DSEF+ME+E  RMLLD+   + P T + N+Q+VA CGRPPRYDSC G++ Q
Subjt:  TLATPSMTTIILLLLLIPT--GSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ

Query:  TPPGEKCGTYKR
         P  E C    R
Subjt:  TPPGEKCGTYKR

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1850.85Show/hide
Query:  ATLATPSMTTIILLLLLIP---TGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQK
        ATL TPSMT + ++LLL P   + + +N TA+  CDG   E C L+ +  +DSEF+ME+E  RMLLD+N F+ P T N +KQ+   C RPPRYD CLGQK
Subjt:  ATLATPSMTTIILLLLLIP---TGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQK

Query:  SQTPPGEKCGTYKRV-PC
        +  P  E C T  RV PC
Subjt:  SQTPPGEKCGTYKRV-PC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-1951.69Show/hide
Query:  ATLATPSMTTIILLLLLIP---TGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQK
        ATL TPSMT + ++LLL P   + + +N TA+  CDG   E C L+ +  +DSEF+ME+E  RMLLD+N F+ P T N +KQ+   C RPPRYDSCLGQK
Subjt:  ATLATPSMTTIILLLLLIP---TGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQK

Query:  SQTPPGEKCGTYKRV-PC
        +  P  E C T  RV PC
Subjt:  SQTPPGEKCGTYKRV-PC

KGN57776.1 hypothetical protein Csa_010194 [Cucumis sativus]1.1e-2662.61Show/hide
Query:  MATLATPSMTTIILLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSEFMMESEIRRML-LDYNKFKAPPTGNRNKQAVA-PCGRPPRYDSCLGQ
        MA L+TPS+ TIILLLLLIP+G TVN T   ASC+ SHS+KCHLVR+++ D EFMMESE+  ML ++Y+K+K+PPT   NKQ V   CGRPPRY+SCLG+
Subjt:  MATLATPSMTTIILLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSEFMMESEIRRML-LDYNKFKAPPTGNRNKQAVA-PCGRPPRYDSCLGQ

Query:  KSQTPPGEKCGTYKR
        K  T   EKC  YKR
Subjt:  KSQTPPGEKCGTYKR

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein2.6e-1650Show/hide
Query:  TLATPSMTTIILLLLLIPT--GSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ
        T + P+M  +IL LL  PT   +TVN T S  C G  SE C LV +E  DSEF+ME+E  RMLLD+   + P T + N+Q+VA CGRPPRYDSC G++ Q
Subjt:  TLATPSMTTIILLLLLIPT--GSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ

Query:  TPPGEKCGTYKRV-PC
         P  E C    R  PC
Subjt:  TPPGEKCGTYKRV-PC

A0A0A0LCI8 Uncharacterized protein5.6e-2762.61Show/hide
Query:  MATLATPSMTTIILLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSEFMMESEIRRML-LDYNKFKAPPTGNRNKQAVA-PCGRPPRYDSCLGQ
        MA L+TPS+ TIILLLLLIP+G TVN T   ASC+ SHS+KCHLVR+++ D EFMMESE+  ML ++Y+K+K+PPT   NKQ V   CGRPPRY+SCLG+
Subjt:  MATLATPSMTTIILLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSEFMMESEIRRML-LDYNKFKAPPTGNRNKQAVA-PCGRPPRYDSCLGQ

Query:  KSQTPPGEKCGTYKR
        K  T   EKC  YKR
Subjt:  KSQTPPGEKCGTYKR

A0A5D3BZL1 Uncharacterized protein2.9e-1547.41Show/hide
Query:  TLATPSMTTIILLLLL--IPTGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ
        T + P+M  IIL+LL   I   +TVN TA   C G  SE C L+ +E +DSEF+ME++  RMLLD+   + P T N N+Q+V  CGRPPRYDSC+G+K  
Subjt:  TLATPSMTTIILLLLL--IPTGSTVNHTAS--CDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQ

Query:  TPPGEKCGTYKRV-PC
            E C    R  PC
Subjt:  TPPGEKCGTYKRV-PC

A0A5D3E3B8 Uncharacterized protein5.4e-3062.5Show/hide
Query:  MATLATPSMTTII--LLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSE-FMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLG
        MA L+TPS+ TII  LLL+LI +G TVN T   ASC+ SHS+KCHLVR+++AD +  MME E+ RMLLD+NK+  P TG  NK +   CGRPPRYDSCLG
Subjt:  MATLATPSMTTII--LLLLLIPTGSTVNHT---ASCDGSHSEKCHLVREEMADSE-FMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLG

Query:  QKSQTPPGEKCGTYKRVPCG
        +K  TPP EKC  YKRVPCG
Subjt:  QKSQTPPGEKCGTYKRVPCG

A0A6J1G927 uncharacterized protein LOC1114520443.5e-1344.95Show/hide
Query:  ILLLLLIPTGS-------TVNHTASCDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQTPPGEKC
        I++LLL PT S        +N+  S  G      +L+ ++  DSEF+MES I R+L     F+   T + NK +   CGRPPRYDSCLGQKS  PP E C
Subjt:  ILLLLLIPTGS-------TVNHTASCDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQTPPGEKC

Query:  GTYKR-VPC
        GT+ R  PC
Subjt:  GTYKR-VPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACATTGGCCACACCATCAATGACAACCATCATTCTTCTCCTCCTCCTCATTCCGACTGGCTCCACCGTCAACCACACTGCCTCTTGCGACGGCAGCCACTCGGA
GAAATGCCACCTTGTCCGAGAAGAGATGGCTGATTCCGAATTCATGATGGAATCGGAGATCCGACGAATGCTGTTAGACTACAACAAATTCAAAGCCCCACCAACTGGAA
ACCGCAACAAACAGGCGGTGGCGCCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTTGGCCAGAAGAGTCAAACGCCACCAGGGGAAAAATGCGGCACCTACAAACGA
GTGCCTTGTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACATTGGCCACACCATCAATGACAACCATCATTCTTCTCCTCCTCCTCATTCCGACTGGCTCCACCGTCAACCACACTGCCTCTTGCGACGGCAGCCACTCGGA
GAAATGCCACCTTGTCCGAGAAGAGATGGCTGATTCCGAATTCATGATGGAATCGGAGATCCGACGAATGCTGTTAGACTACAACAAATTCAAAGCCCCACCAACTGGAA
ACCGCAACAAACAGGCGGTGGCGCCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTTGGCCAGAAGAGTCAAACGCCACCAGGGGAAAAATGCGGCACCTACAAACGA
GTGCCTTGTGGGTAA
Protein sequenceShow/hide protein sequence
MATLATPSMTTIILLLLLIPTGSTVNHTASCDGSHSEKCHLVREEMADSEFMMESEIRRMLLDYNKFKAPPTGNRNKQAVAPCGRPPRYDSCLGQKSQTPPGEKCGTYKR
VPCG