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Lsi05G003680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4668818..4670059
RNA-Seq ExpressionLsi05G003680
SyntenyLsi05G003680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650593.1 hypothetical protein Csa_011480, partial [Cucumis sativus]1.1e-3292Show/hide
Query:  LGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC
        LGK L+GDIDT+FLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPP ENCDP+NR NPC
Subjt:  LGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC

KAG6607027.1 hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3570.34Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M PATIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

KAG7036723.1 hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3469.49Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M PATIAVVILLL+   CDAF  +KPL N T   GK ++G DID EFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

XP_022948337.1 uncharacterized protein LOC111452043 [Cucurbita moschata]8.8e-3569.49Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M P TIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

XP_022998176.1 uncharacterized protein LOC111492901 [Cucurbita maxima]4.6e-3671.19Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M PATIAVVILLL+  +CDAF  +KPL N T   GK ++G DIDTEFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPRYDSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

TrEMBL top hitse value%identityAlignment
A0A0A0L9X5 Uncharacterized protein2.7e-4582.46Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNP
        MAAATL I  T+A+V LLL+   CDAF ASKP+ NL+SDLGK L+GDIDT+FLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNP
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNP

Query:  PPENCDPFNRVNPC
        P ENCDP+NR NPC
Subjt:  PPENCDPFNRVNPC

A0A6J1CP71 uncharacterized protein LOC1110132781.5e-2764.41Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLL-NLTSDLGKLLVG--DIDTEFLMESHVSRILAE-LRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MA A +MIP  +A+ ILL  P DCDA T SK LL N T    K L+G  DI +EFLME H+SRILAE LRF+TM TPNAN  SV +CERPPRYDSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLL-NLTSDLGKLLVG--DIDTEFLMESHVSRILAE-LRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        R+ PP ENC  FNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

A0A6J1G8W5 uncharacterized protein LOC1114520434.2e-3569.49Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M P TIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

A0A6J1K9J3 uncharacterized protein LOC1114929012.2e-3671.19Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA
        MAA   M PATIAVVILLL+  +CDAF  +KPL N T   GK ++G DIDTEFLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPRYDSCLGE 
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVSRILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEA

Query:  RDNPPPENCDPFNRVNPC
        ++NPP ENCDPFNR NPC
Subjt:  RDNPPPENCDPFNRVNPC

A0A6J1KBP5 uncharacterized protein LOC1114928542.3e-2863.25Show/hide
Query:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG--DIDTEFLMESHVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEAR
        MAAA +MIPA +A++ILLL P   DA T  KPL N TS  GK L+G  DID+EFLMESH+SRILA  + F+T +T +AN AS   CERPPRYDSCLG+  
Subjt:  MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG--DIDTEFLMESHVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEAR

Query:  DNPPPENCDPFNRVNPC
        +NPPPENC  FNR NPC
Subjt:  DNPPPENCDPFNRVNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCAGCAACGTTGATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTCATTCCGGCTGATTGCGATGCCTTTACAGCTTCCAAACCACTTTTGAACCTCAC
TTCCGATCTTGGAAAACTCCTTGTTGGAGATATCGATACGGAATTTCTAATGGAATCGCATGTGAGTCGAATTCTAGCCGAGCTGAGGTTCGAAACTATGAGGACACCGA
ATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGACCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCACCGCCGGAAAACTGCGACCCCTTCAATCGC
GTCAATCCCTGTTAA
mRNA sequenceShow/hide mRNA sequence
CCTCCTTCCCAATTGTCTTTTCATTCACCGTCGTGCTCGACACCGACATCAAAACCTAGCCACGACGATGGCCGCAGCAACGTTGATGATACCCGCCACCATAGCCGTCG
TGATTTTGCTGCTCATTCCGGCTGATTGCGATGCCTTTACAGCTTCCAAACCACTTTTGAACCTCACTTCCGATCTTGGAAAACTCCTTGTTGGAGATATCGATACGGAA
TTTCTAATGGAATCGCATGTGAGTCGAATTCTAGCCGAGCTGAGGTTCGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGACCGCCACG
CTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCACCGCCGGAAAACTGCGACCCCTTCAATCGCGTCAATCCCTGTTAATTAGAATGAAAAGAAAGAAAGAATAAGG
AGATCCAACAGCTTCATTATGATTTAGGGTTTACAACAACTTTTAGGAATTAATAATGTAATCAACACATAAATAGTAGTAAGTAAGATCGTTTCCATATATGTTGTTTG
ATCAAATTTTGTGACTTTTATCTTTCTTGTTCAGTTGAATATTGAATGAAACTATATATCTTTGTTGGATTGCA
Protein sequenceShow/hide protein sequence
MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNR
VNPC