; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4681024..4682547
RNA-Seq ExpressionLsi05G003700
SyntenyLsi05G003700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]5.7e-4580.51Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAAV+IPAA+ +MILLLN +  DALTSFKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

TYK01622.1 hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa]1.3e-4175.63Show/hide
Query:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+A MIPAAV  MILLLN  S C+ALT+F+PLL+N T+   + +VG++DM+ EF+MESH+SRILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTYNRQNPC
        KRNNPPP NCGTYNR NPC
Subjt:  KRNNPPPENCGTYNRQNPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]4.3e-4580.51Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAAV+IPAA+ +MILLLN +  DALTSFKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]8.2e-4478.81Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAAVMIPAA+ +MILLLN +  DALT+FKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]1.6e-4479.66Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MA AA MIPAA+ +MILLLN    DALTSFKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQNFQT++T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

TrEMBL top hitse value%identityAlignment
A0A0A0LCJ4 Uncharacterized protein6.5e-3971.43Show/hide
Query:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+A+MIPAAV  MILLL+  S CDALT+F+PLL+N ++  GK ++G++DME EFLMESH+SRILASS+N+QT STT+ANKASGGGC RPPRYDSCLG+
Subjt:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTYNRQNPC
        KRNNPPP NC  YNR NPC
Subjt:  KRNNPPPENCGTYNRQNPC

A0A5D3BS53 Uncharacterized protein6.3e-4275.63Show/hide
Query:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ
        M A+A MIPAAV  MILLLN  S C+ALT+F+PLL+N T+   + +VG++DM+ EF+MESH+SRILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAAVMIPAAVTMMILLLN-SSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQ

Query:  KRNNPPPENCGTYNRQNPC
        KRNNPPP NCGTYNR NPC
Subjt:  KRNNPPPENCGTYNRQNPC

A0A6J1CP71 uncharacterized protein LOC1110132783.3e-3062.71Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MA AAVMIP  + + ILL N   CDALT+ K LLNN+T    K L+GD+D+ SEFLME H+SRILA S  FQT +T +AN  S   C RPPRYDSCLG+K
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
        RN PP ENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

A0A6J1G927 uncharacterized protein LOC1114520442.1e-4580.51Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAAV+IPAA+ +MILLLN +  DALTSFKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

A0A6J1KBP5 uncharacterized protein LOC1114928544.0e-4478.81Show/hide
Query:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK
        MAAAAVMIPAA+ +MILLLN +  DALT+FKP LNNDT+  GKYL+GDQD++SEFLMESH+SRILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK
Subjt:  MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQK

Query:  RNNPPPENCGTYNRQNPC
         NNPPPENCGT+NR NPC
Subjt:  RNNPPPENCGTYNRQNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGGTGATGATACCAGCCGCCGTGACGATGATGATTCTGCTGCTCAATTCAAGTGGTTGCGATGCTCTTACATCTTTCAAACCGCTTCTCAACAACGA
CACTACTCGTACCGGAAAGTACCTCGTCGGAGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACGTCAGCCGGATCCTAGCGTCCTCCCAAAACTTCCAAACCA
CCTCCACTACCGACGCTAACAAAGCTTCTGGCGGTGGTTGCGGCCGGCCGCCGCGCTATGACAGTTGTCTCGGCCAGAAAAGAAATAATCCGCCGCCGGAAAACTGTGGT
ACCTACAATCGTCAAAATCCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
TAGACATTATAAATTAAGGTGACCAAACACAAAAGTTGCCCATAATTTTGATTTTCCTCTTTCCCAAATCCCAATCGTATTCGTCGGCCACCTGTCGCCACCATAAAAAA
CCAGCGACGGCAATGGCTGCAGCGGCGGTGATGATACCAGCCGCCGTGACGATGATGATTCTGCTGCTCAATTCAAGTGGTTGCGATGCTCTTACATCTTTCAAACCGCT
TCTCAACAACGACACTACTCGTACCGGAAAGTACCTCGTCGGAGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACGTCAGCCGGATCCTAGCGTCCTCCCAAA
ACTTCCAAACCACCTCCACTACCGACGCTAACAAAGCTTCTGGCGGTGGTTGCGGCCGGCCGCCGCGCTATGACAGTTGTCTCGGCCAGAAAAGAAATAATCCGCCGCCG
GAAAACTGTGGTACCTACAATCGTCAAAATCCCTGTTAGAAAAATTACTCCAAAATATGATCTACATTTACAACTTCTCTATTCAGTTTTTACCGTTTATATAATTTCCT
CGCTCAAATCTTTATCGTTAATAAAGTTTAATGAAAAAAAAAATTGTTGGCCATCCTCATCGCGAGGTTTAAAATTTCGGAATCTACATCAAAATATTGATAAAATATTG
ATATTTCTAAAAATTCTCTAAATAAGAAATCAAGAAAATGTTTAAATTAATCATTAATATTTTATATTTCTCGAATAAGTTTAAGAGCTCATGATCAAATCTTATATTAA
TATGAATTACCTATTGTTGCTATTTTTAAAAAATATTTTTGGACAATTTTTTTAGAGCACAATGAGAATATCGACTCACCCTCCCT
Protein sequenceShow/hide protein sequence
MAAAAVMIPAAVTMMILLLNSSGCDALTSFKPLLNNDTTRTGKYLVGDQDMESEFLMESHVSRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCG
TYNRQNPC