; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G003710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4686831..4690347
RNA-Seq ExpressionLsi05G003710
SyntenyLsi05G003710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2457.14Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MAAAA++IPAA+ +MILL+NPT  D LTSF+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQN  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

TYK01622.1 hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa]3.6e-1852.07Show/hide
Query:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG
        M A+A MIPAAV  MILL+N P++ + LT+FEP L + TS   + +VGE+DM++EF+MES+IS  LA SQN  T +T +A KA  GGC R    Y S LG
Subjt:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG

Query:  HPNTNNRPPRHCGIYSHKNPC
            NN PP +CG Y+  NPC
Subjt:  HPNTNNRPPRHCGIYSHKNPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]4.4e-2457.14Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MAAAA++IPAA+ +MILL+NPT  D LTSF+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQN  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]1.3e-2356.3Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MAAAA+MIPAA+ +MILL+NPT+ D LT+F+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQ+  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]6.3e-2356.3Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MA AA MIPAA+ +MILL+NP   D LTSF+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQN  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein3.0e-1042.86Show/hide
Query:  AAALMIPAAVTMMILLINPTAY-DTLTSFEPFLYDTSRAR-KYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        A ALMIPAA+ MM++++ PTA    LTSF+P    TS    KY+V E+D++  F+MES+IS  LA SQ+  T +T  A +   G C+R    Y S LG  
Subjt:  AAALMIPAAVTMMILLINPTAY-DTLTSFEPFLYDTSRAR-KYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
          N  PP++C  ++ ++PC
Subjt:  NTNNRPPRHCGIYSHKNPC

A0A0A0LCJ4 Uncharacterized protein3.3e-1752.07Show/hide
Query:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG
        M A+ALMIPAAV  MILL++ P++ D LT+F+P L + +S   K ++GE+DMELEFLMES+IS  LA S+N  T +T  A KA  GGC+R    Y S LG
Subjt:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG

Query:  HPNTNNRPPRHCGIYSHKNPC
            NN PP +C  Y+  NPC
Subjt:  HPNTNNRPPRHCGIYSHKNPC

A0A5D3BS53 Uncharacterized protein1.7e-1852.07Show/hide
Query:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG
        M A+A MIPAAV  MILL+N P++ + LT+FEP L + TS   + +VGE+DM++EF+MES+IS  LA SQN  T +T +A KA  GGC R    Y S LG
Subjt:  MAAAALMIPAAVTMMILLIN-PTAYDTLTSFEPFLYD-TSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLG

Query:  HPNTNNRPPRHCGIYSHKNPC
            NN PP +CG Y+  NPC
Subjt:  HPNTNNRPPRHCGIYSHKNPC

A0A6J1G927 uncharacterized protein LOC1114520442.1e-2457.14Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MAAAA++IPAA+ +MILL+NPT  D LTSF+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQN  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

A0A6J1KBP5 uncharacterized protein LOC1114928546.1e-2456.3Show/hide
Query:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP
        MAAAA+MIPAA+ +MILL+NPT+ D LT+F+P   DTS A KYL+G+QD++ EFLMES+IS  LAGSQ+  T  T +A KA  GGC R    Y S LG  
Subjt:  MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHP

Query:  NTNNRPPRHCGIYSHKNPC
         +NN PP +CG ++  NPC
Subjt:  NTNNRPPRHCGIYSHKNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGCTAATGATTCCAGCCGCCGTGACGATGATGATTCTGCTGATCAATCCAACGGCTTACGATACTCTTACATCTTTCGAGCCATTTCTCTACGACAC
TTCTCGTGCCAGAAAATACCTCGTCGGAGAGCAAGATATGGAGTTGGAGTTTCTGATGGAATCGTACATCAGTTGGTTCTTAGCGGGCTCTCAAAATTCTGTAACCGACA
CCACTAAGGAAGCTAAGAAAGCTGTTGACGGCGGTTGCAATCGGTCGGCAACGCTCTACCGCAGTCGTCTTGGTCACCCGAATACAAATAACCGGCCCCCGAGACATTGT
GGCATCTACAGTCACAAAAATCCTTGTTTAAGAAAATAA
mRNA sequenceShow/hide mRNA sequence
CAAAGATGCCCATATTTTTGCTTTTCCTCCTTCCTAAATATGAATAGTATTCGTCCGCTGCCTGCTGCCACCGACAAAACCAGCAACGGCAATGGCTGCAGCGGCGCTAA
TGATTCCAGCCGCCGTGACGATGATGATTCTGCTGATCAATCCAACGGCTTACGATACTCTTACATCTTTCGAGCCATTTCTCTACGACACTTCTCGTGCCAGAAAATAC
CTCGTCGGAGAGCAAGATATGGAGTTGGAGTTTCTGATGGAATCGTACATCAGTTGGTTCTTAGCGGGCTCTCAAAATTCTGTAACCGACACCACTAAGGAAGCTAAGAA
AGCTGTTGACGGCGGTTGCAATCGGTCGGCAACGCTCTACCGCAGTCGTCTTGGTCACCCGAATACAAATAACCGGCCCCCGAGACATTGTGGCATCTACAGTCACAAAA
ATCCTTGTTTAAGAAAATAACACCAAAATATGTGTCCATTGTGTAGAACTTGGAACAACGGTTCCAATGCAATTTGAATCACTCAAATCGGAGTTCAAACGAAGAAGATA
TGACTGGAACAAGCTTAACAGAAAAATACCCGATGTCGATGACGTGGCGGCCAAATCATCAAAGGGGACCTACTAGAGGATGACAAGTGGAGAAATAGATAAGTGAC
Protein sequenceShow/hide protein sequence
MAAAALMIPAAVTMMILLINPTAYDTLTSFEPFLYDTSRARKYLVGEQDMELEFLMESYISWFLAGSQNSVTDTTKEAKKAVDGGCNRSATLYRSRLGHPNTNNRPPRHC
GIYSHKNPCLRK