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Lsi05G003720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:4700374..4702337
RNA-Seq ExpressionLsi05G003720
SyntenyLsi05G003720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3165.29Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MAAAA++IPAA+ +MILLLNPT  +ALTSF+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +QNF+TS+T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

TYK01622.1 hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa]1.2e-2557.38Show/hide
Query:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR
        M A+A MIPAAV  MILLLN P++C ALT+FEPLL++       ++G  + +VGE+DM+ EF+MESHISRIL  +QNF+T+ T+D +KA+ GGC RP  R
Subjt:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR

Query:  YDSCLNQKRKIKPPENCDIFNR
        YDSCL QKR   PP NC  +NR
Subjt:  YDSCLNQKRKIKPPENCDIFNR

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]1.1e-3165.29Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MAAAA++IPAA+ +MILLLNPT  +ALTSF+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +QNF+TS+T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]3.1e-3164.46Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MAAAA+MIPAA+ +MILLLNPT+ +ALT+F+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +Q+F+TS+T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]3.5e-3064.46Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MA AA MIPAA+ +MILLLNP   +ALTSF+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +QNF+TS T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein5.8e-2354.55Show/hide
Query:  AAALMIPAAVTMMILLLNPTAC-NALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRYD
        A ALMIPAA+ MM+++L PTAC  ALTSF+PL N TS       G  KY+V E+D++S F+MESHISR+L D+Q+F+TS T +  + + G C RP  RYD
Subjt:  AAALMIPAAVTMMILLLNPTAC-NALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRYD

Query:  SCLNQKRKIKPPENCDIFNRK
        SCL  KR   PP+NC  FNR+
Subjt:  SCLNQKRKIKPPENCDIFNRK

A0A0A0LCJ4 Uncharacterized protein4.7e-2556.56Show/hide
Query:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR
        M A+ALMIPAAV  MILLL+ P++C+ALT+F+PLL++ S     ++G GK ++GE+DME EFLMESHISRIL  ++N++T+ T + +KA+ GGC RP  R
Subjt:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR

Query:  YDSCLNQKRKIKPPENCDIFNR
        YDSCL +KR   PP NC  +NR
Subjt:  YDSCLNQKRKIKPPENCDIFNR

A0A5D3BS53 Uncharacterized protein5.6e-2657.38Show/hide
Query:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR
        M A+A MIPAAV  MILLLN P++C ALT+FEPLL++       ++G  + +VGE+DM+ EF+MESHISRIL  +QNF+T+ T+D +KA+ GGC RP  R
Subjt:  MAAAALMIPAAVTMMILLLN-PTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQR

Query:  YDSCLNQKRKIKPPENCDIFNR
        YDSCL QKR   PP NC  +NR
Subjt:  YDSCLNQKRKIKPPENCDIFNR

A0A6J1G927 uncharacterized protein LOC1114520445.2e-3265.29Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MAAAA++IPAA+ +MILLLNPT  +ALTSF+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +QNF+TS+T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

A0A6J1KBP5 uncharacterized protein LOC1114928541.5e-3164.46Show/hide
Query:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY
        MAAAA+MIPAA+ +MILLLNPT+ +ALT+F+PL NDTS        AGKYL+G+QD++SEFLMESHISRIL  +Q+F+TS+T D +KA+ GGC RP  RY
Subjt:  MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRY

Query:  DSCLNQKRKIKPPENCDIFNR
        DSCL QK    PPENC  FNR
Subjt:  DSCLNQKRKIKPPENCDIFNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGCTGATGATTCCAGCCGCCGTGACAATGATGATTCTGCTGCTCAATCCGACGGCTTGCAATGCTCTTACATCTTTCGAGCCACTTCTCAATGACAC
TTCTCGTGAGCTTGAAATAACTTTTGGTGCTGGAAAATACCTCGTCGGAGAGCAAGATATGGAGTCGGAGTTTCTGATGGAGTCGCACATCAGCAGGATCTTGTTGGACA
ACCAAAATTTCAAAACCAGCCGGACTATTGACCCTCACAAAGCTGCTGACGGCGGTTGCAGCCGGCCGAAGCAGCGGTACGACAGTTGTCTCAACCAGAAAAGAAAAATA
AAGCCGCCGGAAAACTGTGACATCTTCAATCGCAAAATCCATGTCCTTACATATGATCTACATTTACAGCTTCTCTATTGA
mRNA sequenceShow/hide mRNA sequence
GCCCATATAATTTTGCTTTTCCCTCCTTCCCAAATCCCAATAGTATTCATCCGCCGCCTGCCGCCACCATCAAAACCAGCTATTGCGATGGCTGCAGCGGCGCTGATGAT
TCCAGCCGCCGTGACAATGATGATTCTGCTGCTCAATCCGACGGCTTGCAATGCTCTTACATCTTTCGAGCCACTTCTCAATGACACTTCTCGTGAGCTTGAAATAACTT
TTGGTGCTGGAAAATACCTCGTCGGAGAGCAAGATATGGAGTCGGAGTTTCTGATGGAGTCGCACATCAGCAGGATCTTGTTGGACAACCAAAATTTCAAAACCAGCCGG
ACTATTGACCCTCACAAAGCTGCTGACGGCGGTTGCAGCCGGCCGAAGCAGCGGTACGACAGTTGTCTCAACCAGAAAAGAAAAATAAAGCCGCCGGAAAACTGTGACAT
CTTCAATCGCAAAATCCATGTCCTTACATATGATCTACATTTACAGCTTCTCTATTGA
Protein sequenceShow/hide protein sequence
MAAAALMIPAAVTMMILLLNPTACNALTSFEPLLNDTSRELEITFGAGKYLVGEQDMESEFLMESHISRILLDNQNFKTSRTIDPHKAADGGCSRPKQRYDSCLNQKRKI
KPPENCDIFNRKIHVLTYDLHLQLLY