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Lsi05G003880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G003880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAdenosylmethionine decarboxylase
Genome locationchr05:4902304..4902683
RNA-Seq ExpressionLsi05G003880
SyntenyLsi05G003880
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581173.1 hypothetical protein SDJN03_21175, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1888.14Show/hide
Query:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
        ++ ANDLMESKGGKKK  SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN +R
Subjt:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
KAG6607040.1 Uridine kinase-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1996.36Show/hide
Query:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
        NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN +R
Subjt:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
KAG7017910.1 hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-1888.14Show/hide
Query:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
        ++ ANDLMESKGGKKK  SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN +R
Subjt:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
KAG7036737.1 S-adenosylmethionine decarboxylase proenzyme, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1985.71Show/hide
Query:  ANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSF
        ANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN+    + + F
Subjt:  ANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSF
THG01014.1 hypothetical protein TEA_024532 [Camellia sinensis var. sinensis]5.6e-1974.68Show/hide
Query:  LISFWGATSIYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFR
        LI F   T +   NDLMESKGGKKK   SSSSSKS+FYEAPLGYSIEDVRP+GGIKKFRSAAYSNV+R +AIL F E R
Subjt:  LISFWGATSIYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFR
TrEMBL top hitse value%identityAlignment
A0A0A0LAP2 Uncharacterized protein1.3e-1889.83Show/hide
Query:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
        ++ ANDLMESKGGKKK SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN +R
Subjt:  IYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
A0A4S4DFF5 S-adenosylmethionine decarboxylase alpha chain2.7e-1974.68Show/hide
Query:  LISFWGATSIYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFR
        LI F   T +   NDLMESKGGKKK   SSSSSKS+FYEAPLGYSIEDVRP+GGIKKFRSAAYSNV+R +AIL F E R
Subjt:  LISFWGATSIYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFR
A0A6A6MF36 Uncharacterized protein3.7e-1689.09Show/hide
Query:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
        NDLMESKGGKKK    SSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN +R
Subjt:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLR
A0A6A6MN09 Adenosylmethionine decarboxylase2.2e-1672.97Show/hide
Query:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFRLPCAPGSL
        NDLMESKGGKKK    SSSSKSLFYEAPLGYSIEDVRPHGGIKKFR+AAYSN L     LSF+E      PG +
Subjt:  NDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFRLPCAPGSL
A0A7J9BJG9 Adenosylmethionine decarboxylase2.8e-1679.03Show/hide
Query:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEF
        ME+KGGKK  + S+SSSKS FYEAPLGYSIEDVRPHGGIKKFRSAAYSNV+  KAI+ FA+F
Subjt:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 91.8e-1582Show/hide
Query:  LMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        +MESKGGKKKSSSSS    SLFYEAPLGYSIEDVRP+GGIKKF+S+ YSN
Subjt:  LMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
AT3G25572.1 conserved peptide upstream open reading frame 115.2e-1582Show/hide
Query:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
        ME+KGGKKKSS+SSS   SLF+EAPL YSIEDVRP+GGIKKFRSAAYSN+
Subjt:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNV
AT5G15948.1 conserved peptide upstream open reading frame 101.9e-1275.51Show/hide
Query:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN
        MESK G KKSSS+S    SL YEAPLGYSIEDVRP GGIKKF+S+ YSN
Subjt:  MESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGACTTCTCTGATATCATTTTGGGGTGCTACCTCTATCTATGCAGCGAATGATTTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAG
TAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTCAGACCACACGGTGGAATCAAGAAGTTCAGATCAGCTGCTTACTCCAACGTATTGCGTT
CGAAAGCCATCCTGAGTTTTGCTGAATTCCGTTTACCCTGCGCCCCAGGATCCTTAGTTTCGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGACTTCTCTGATATCATTTTGGGGTGCTACCTCTATCTATGCAGCGAATGATTTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAG
TAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTCAGACCACACGGTGGAATCAAGAAGTTCAGATCAGCTGCTTACTCCAACGTATTGCGTT
CGAAAGCCATCCTGAGTTTTGCTGAATTCCGTTTACCCTGCGCCCCAGGATCCTTAGTTTCGTTATAA
Protein sequenceShow/hide protein sequence
MVETSLISFWGATSIYAANDLMESKGGKKKSSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNVLRSKAILSFAEFRLPCAPGSLVSL