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Lsi05G004010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor bHLH63-like
Genome locationchr05:5076641..5078617
RNA-Seq ExpressionLsi05G004010
SyntenyLsi05G004010
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR024097 - Basic helix-loop-helix leucine zipper transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055413.1 transcription factor bHLH49-like [Cucumis melo var. makuwa]1.4e-2780Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHI
        NK+VFPPSCT ANFPA+G MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT++
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHI
XP_008448085.1 PREDICTED: transcription factor bHLH49-like [Cucumis melo]1.8e-2777.38Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        NK+VFPPSCT ANFPA+G MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT    +S
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
XP_011658545.1 transcription factor bHLH63 [Cucumis sativus]3.1e-2777.38Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        NK+VFPPSCT ANFP+VG MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT    +S
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
XP_023529229.1 transcription factor bHLH63-like [Cucurbita pepo subsp. pepo]2.2e-2573.49Show/hide
Query:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        K+VFPP CTTA F A+G +SSE+T+PSSYLQFNPNNQQ+V CCGLEMGINTSDVAL+R ISAPV   EN LDSSCLT    +S
Subjt:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
XP_038888827.1 transcription factor bHLH63-like [Benincasa hispida]1.6e-2878.57Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        NK+VFPPSCTTANFPA+G MSSE+T+PSS+LQFNPNNQ MVSCCGLEMGINTSDVAL+R ISAPV   EN LDSSCLT    +S
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
TrEMBL top hitse value%identityAlignment
A0A0A0K0C8 BHLH domain-containing protein1.5e-2777.38Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        NK+VFPPSCT ANFP+VG MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT    +S
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
A0A1S3BJH6 transcription factor bHLH49-like8.8e-2877.38Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        NK+VFPPSCT ANFPA+G MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT    +S
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
A0A5D3DFI8 Transcription factor bHLH49-like6.7e-2880Show/hide
Query:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHI
        NK+VFPPSCT ANFPA+G MSSE+T+PSSYLQFNPNNQQM SCCGLEMGINTS VAL+R ISAPV   EN LDSSCLT++
Subjt:  NKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHI
A0A6J1F684 transcription factor bHLH63-like2.4e-2572.29Show/hide
Query:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        K+VFPP CTTA F A+G +SSE+T+PSSYLQFNPNNQQ+V CCGLE+GINTSDVAL+R ISAPV   EN LDSSCLT    +S
Subjt:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
A0A6J1I0A0 transcription factor bHLH63-like7.0e-2572.29Show/hide
Query:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
        K+VFPP CTTANF A+G +SSE+T+PSSY QFN NNQQ+V CCGLEMGINTSDVAL+R ISAPV   EN LDSSCLT    +S
Subjt:  KQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAAACAAACAGGTTTTCCCCCCATCTTGCACCACCGCGAATTTCCCGGCGGTCGGCAGAATGTCATCGGAGGTGACAAATCCTTCTTCCTACTTACAATTCAATCCAAA
CAATCAACAAATGGTCTCGTGTTGTGGATTAGAAATGGGAATCAATACCTCCGATGTCGCTCTTCAAAGAATAATCAGCGCTCCTGTTCCTTGCTCGGAAAATTTGCTCG
ATTCATCCTGCCTCACCCACATCTCTCTCGCTTCTCCTACCCTTCTTCTACTTCCTCCTTTGCTTTGCTTTGCTTGCTTTCATGGAGTTCAAAGCTTTTTCTCCAAAATG
AAACAATTGCTTAACTTTACGTGA
mRNA sequenceShow/hide mRNA sequence
ACAAACAAACAGGTTTTCCCCCCATCTTGCACCACCGCGAATTTCCCGGCGGTCGGCAGAATGTCATCGGAGGTGACAAATCCTTCTTCCTACTTACAATTCAATCCAAA
CAATCAACAAATGGTCTCGTGTTGTGGATTAGAAATGGGAATCAATACCTCCGATGTCGCTCTTCAAAGAATAATCAGCGCTCCTGTTCCTTGCTCGGAAAATTTGCTCG
ATTCATCCTGCCTCACCCACATCTCTCTCGCTTCTCCTACCCTTCTTCTACTTCCTCCTTTGCTTTGCTTTGCTTGCTTTCATGGAGTTCAAAGCTTTTTCTCCAAAATG
AAACAATTGCTTAACTTTACGTGA
Protein sequenceShow/hide protein sequence
TNKQVFPPSCTTANFPAVGRMSSEVTNPSSYLQFNPNNQQMVSCCGLEMGINTSDVALQRIISAPVPCSENLLDSSCLTHISLASPTLLLLPPLLCFACFHGVQSFFSKM
KQLLNFT