; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionagamous-like MADS-box protein AGL6
Genome locationchr05:5119275..5120235
RNA-Seq ExpressionLsi05G004050
SyntenyLsi05G004050
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033897 - MADS SRF-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581182.1 Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. sororia]4.2e-6552.65Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+      FETWP +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEY
        I                             QLK L+A LDSKIGVAD MI+FMEADYD+LIE A  ISSI+  +F P ETE  P+L++PEL         
Subjt:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEY

Query:  NVEKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDTPSFSPFEIEELPEVDISELLIL
             ME +YD+LI   +EI ++D  + S FE + + + D+SE+             FTE +YD LI+  + I SIDT +FSPFE E  PE D+SE+L+ 
Subjt:  NVEKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDTPSFSPFEIEELPEVDISELLIL

Query:  AD
        A+
Subjt:  AD

KAG7017922.1 Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-6750.61Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+      FETWP +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPEL---------
        I                             QLK L+  LDSKIGVAD MI+FMEADYD+LIE A  ISSI+  +F+P ETE  PKL++PEL         
Subjt:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPEL---------

Query:  -------------LIGPYGFEYNV-----EKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRI
                      + P+  E +      E FME++YD LI   +EI +ID  +FS FET+ +PE D+SE+L+             E + DHLIE  + I
Subjt:  -------------LIGPYGFEYNV-----EKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRI

Query:  SSIDTPSFSPFEIEELPEVDISELLI
         SIDT +FSP EIE   E D+SE+ +
Subjt:  SSIDTPSFSPFEIEELPEVDISELLI

XP_023526169.1 agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]1.9e-6551.06Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IASD      F+TWP + +Q++AMIRSYKS SF K S  SSYDL QFFSDRKNK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPEL--------L
        I                             QLK LLA LDSKIGVAD MI+FMEADYD+LIE A  ISSI+  + +P ETE  PKL++ EL        L
Subjt:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPEL--------L

Query:  IG--------------PYGFEYNV-----EKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRI
        IG              P+  E +      E FME++YD LI   +EI +ID  +FS FET+ + E D+SE+             F E +YD+LIE  + I
Subjt:  IG--------------PYGFEYNV-----EKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRI

Query:  SSIDTPSFSPFEIEELPEVDISELLILAD
         S DT +FSPFE E  PE D+SE+L+ A+
Subjt:  SSIDTPSFSPFEIEELPEVDISELLILAD

XP_038877825.1 agamous-like MADS-box protein MADS1 [Benincasa hispida]2.1e-6468.1Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPK-QSRNSSYDLQQFFSDRKN
        MGRG LSLKLIPNLKSRRTTF+KRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWP NHDQI AMIRSYKS SFPK  SRNSSY+L+QFFSDRKN
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPK-QSRNSSYDLQQFFSDRKN

Query:  KI----------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQP-PKLDLPELLIGPYGFEYNVEKF
        KI                      QLKELLA LDSKIGVADGMIQFM+ADYDHLIE+A G+ ++      P ETE+P  + D+ E LI P  FEYNVE F
Subjt:  KI----------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQP-PKLDLPELLIGPYGFEYNVEKF

Query:  ---METDYDH
           +E ++++
Subjt:  ---METDYDH

XP_038887166.1 MADS-box protein SVP-like [Benincasa hispida]5.8e-10762.67Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRG L+LKLIPNLKSRRTTF+KRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWP NHDQI +MIRSYKSHSFPK SRN SY+L QFFS R NK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I-------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEYNVEK
        I                         QL+ELLA+LDSKIGV DGMIQFMEADYDHLIEE SG SSI+ PSF P ET++ P+LD+ E LIG  G EYNVE+
Subjt:  I-------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEYNVEK

Query:  FMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDTPSFSPFEIEEL---------------
        FMETD  HLI E S I +ID PSFS FET+   ELDISELLIGP+G EYNVEEF E + DHLIEE SRIS I+TPSFSPFE EEL               
Subjt:  FMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDTPSFSPFEIEEL---------------

Query:  --------------------------------PEVDISELLILADEFECNVQDFQSLLEDELLETLL
                                         E+DISELLI  D FE NV+DFQSLLEDEL+ TL+
Subjt:  --------------------------------PEVDISELLILADEFECNVQDFQSLLEDELLETLL

TrEMBL top hitse value%identityAlignment
A0A0A0LAL9 MADS-box domain-containing protein4.7e-5460.83Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRGILSLKLIPN KSRRTTFLKRKKSL+KKAYELSTLCDVQTC+FIASDCDPSTHFETWP NH QI  MIRSYKSHSF K   NSSYDL +FFSDRKNK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGF-EYNVEKF---ME
        I                  QL ELL ALDSKI VA+ MI+FMEADYDHLI++A G+ +   PS    E E+  + ++ +L   P  F EYNVE F   +E
Subjt:  I------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGF-EYNVEKF---ME

Query:  TDYDHLIVEASEISNID
          +   +V+ + I + D
Subjt:  TDYDHLIVEASEISNID

A0A6J1CQM2 uncharacterized protein LOC1110132824.0e-2139.55Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS------THFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFF
        MGRG LSLKLI + KSR  TF KR KSLMKKA+ELSTLCDV+TCV I     P           TWP N ++I+ +IR+YK++   K S   S+ L  FF
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS------THFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFF

Query:  SDRKNKI--------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPY-
        S R  KI                          QL+  +  L SKI  A+GMI FME          S I S  + S   FE + P   D   +++ P  
Subjt:  SDRKNKI--------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPY-

Query:  --GFEYNVEKFMETDYDHLI
           +E+  E   E DYDHLI
Subjt:  --GFEYNVEKFMETDYDHLI

A0A6J1F370 agamous-like MADS-box protein AGL61.1e-6352.48Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK
        MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+      FETWP +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNK
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNK

Query:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEY
        I                             QLK L+A LDSKIGVAD MI+FMEADYD+LIE A  ISSI+   F+P ETE  P+L++ EL         
Subjt:  I-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEY

Query:  NVEKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDT-PSFSPFEIEELPEVDISELLI
             ME +YD+LI   +EI ++D  + S FET+ + E D+SE+             F E +YD LI+  ++I SIDT  +FSPFE E  PE D+SE+L+
Subjt:  NVEKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPDGFEYNVEEFTEVDYDHLIEETSRISSIDT-PSFSPFEIEELPEVDISELLI

Query:  LAD
         A+
Subjt:  LAD

A0A6J1F4C8 agamous-like MADS-box protein AGL141.8e-2136.96Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQ
        M RG LS  LI N KSR +TF +RK SLMKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  +++ MI +YK+ +   Q R   +DL  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQ

Query:  FFSDRKNKI-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHL-----------IEEASGISSINIPSFNPFETE
        +FSDRK K+                             QL+E +  LDS+I  A  M+ FM+AD ++L           + +  G SS  +P     E E
Subjt:  FFSDRKNKI-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHL-----------IEEASGISSINIPSFNPFETE

Query:  QPPKLDLPELLIGPYGFEYNVEKFMETDYD
         P  L+ P       G  +   +F+  D D
Subjt:  QPPKLDLPELLIGPYGFEYNVEKFMETDYD

A0A6J1J5U6 agamous-like MADS-box protein AGL143.4e-2043.45Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQ
        M RG LS  LI N KSR +TF +RK SLMKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  +++ MI +YK+ +   Q R   +DL  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQ

Query:  FFSDRKNKI-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHL
        +FSDRK K+                             QL+E +  LDS+I  A  MI FM+AD ++L
Subjt:  FFSDRKNKI-----------------------------QLKELLAALDSKIGVADGMIQFMEADYDHL

SwissProt top hitse value%identityAlignment
F6I457 Agamous-like MADS-box protein AGL112.7e-0631.07Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQ-QFFSDRKN
        MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      S+    +  +++ I++ I  YK  S    +  S+ ++  Q++     
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQ-QFFSDRKN

Query:  KIQ
        K++
Subjt:  KIQ

P29383 Agamous-like MADS-box protein AGL33.2e-0734.58Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + P     +   +  Y+ HS+    P QS     D  Q +  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD

Query:  RKNKIQL
         K+++++
Subjt:  RKNKIQL

Q38694 Agamous-like MADS-box protein AGL9 homolog1.6e-0654Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASD
        MGRG + LK+I N  +R+ TF KR+K L+KKAYELS LCD +  + I S+
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASD

Q9FIM0 Agamous-like MADS-box protein AGL825.5e-0730.99Show/hide
Query:  ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWPQNHDQIQAMIRSYK---SHSFPKQS--------------
        ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    +  E WP++  +++A+IR YK   S S  K++              
Subjt:  ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWPQNHDQIQAMIRSYK---SHSFPKQS--------------

Query:  --------RNSSYDLQQFFSDRKNKIQLKELLAALDSKIGVA
                R + Y   +   D+ ++ QL  +  A+DSK+  A
Subjt:  --------RNSSYDLQQFFSDRKNKIQLKELLAALDSKIGVA

Q9FJK3 Agamous-like MADS-box protein AGL804.2e-0743.42Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKS
        M R  + L  I N  SR+ TF KRKK LMKK +ELSTLC +  C  I S  D  T+ E WP N   +Q ++  +++
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKS

Arabidopsis top hitse value%identityAlignment
AT2G03710.1 K-box region and MADS-box transcription factor family protein2.3e-0834.58Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + P     +   +  Y+ HS+    P QS     D  Q +  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD

Query:  RKNKIQL
         K+++++
Subjt:  RKNKIQL

AT2G03710.2 K-box region and MADS-box transcription factor family protein2.3e-0834.58Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + P     +   +  Y+ HS+    P QS     D  Q +  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD

Query:  RKNKIQL
         K+++++
Subjt:  RKNKIQL

AT2G03710.3 K-box region and MADS-box transcription factor family protein2.3e-0834.58Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD
        MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + P     +   +  Y+ HS+    P QS     D  Q +  
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSF----PKQSRNSSYDLQQFFSD

Query:  RKNKIQL
         K+++++
Subjt:  RKNKIQL

AT5G48670.1 AGAMOUS-like 803.0e-0843.42Show/hide
Query:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKS
        M R  + L  I N  SR+ TF KRKK LMKK +ELSTLC +  C  I S  D  T+ E WP N   +Q ++  +++
Subjt:  MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKS

AT5G58890.1 AGAMOUS-like 823.9e-0830.99Show/hide
Query:  ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWPQNHDQIQAMIRSYK---SHSFPKQS--------------
        ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    +  E WP++  +++A+IR YK   S S  K++              
Subjt:  ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWPQNHDQIQAMIRSYK---SHSFPKQS--------------

Query:  --------RNSSYDLQQFFSDRKNKIQLKELLAALDSKIGVA
                R + Y   +   D+ ++ QL  +  A+DSK+  A
Subjt:  --------RNSSYDLQQFFSDRKNKIQLKELLAALDSKIGVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGAGGAATATTGAGCCTTAAACTCATTCCTAATCTCAAATCTCGCAGAACAACCTTTCTGAAGAGGAAGAAAAGCCTGATGAAGAAGGCCTACGAGCTTTCCAC
CCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTTGAAACTTGGCCTCAAAATCACGATCAAATCCAGGCTATGATCCGTTCCT
ATAAATCTCACTCTTTCCCCAAACAATCCCGCAACTCCTCTTACGATCTCCAACAATTCTTCTCTGATCGCAAGAACAAAATCCAATTGAAGGAGTTGTTGGCCGCTTTG
GATTCCAAAATCGGAGTTGCAGACGGCATGATTCAGTTCATGGAGGCCGATTACGATCATTTGATTGAGGAAGCATCTGGAATTTCAAGCATTAACATACCATCATTCAA
TCCTTTCGAAACAGAACAACCCCCTAAATTAGACCTACCAGAGTTATTGATTGGGCCATATGGGTTTGAATACAATGTCGAGAAGTTCATGGAGACCGATTACGATCACT
TAATTGTGGAAGCATCTGAAATTTCAAACATTGACCCACCATCATTCAGTTCTTTTGAAACAAAGGAAACCCCTGAATTAGACATATCGGAGTTGTTGATTGGGCCAGAT
GGGTTTGAATACAATGTCGAGGAGTTCACCGAGGTCGACTACGATCACTTGATTGAGGAAACATCTAGAATTTCAAGCATTGACACACCATCATTCAGTCCTTTCGAAAT
AGAGGAACTCCCTGAAGTAGACATATCGGAGTTGTTGATTTTGGCAGATGAGTTTGAATGCAATGTCCAGGATTTTCAATCTCTATTGGAGGACGAGCTTCTCGAAACCC
TGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGAGGAATATTGAGCCTTAAACTCATTCCTAATCTCAAATCTCGCAGAACAACCTTTCTGAAGAGGAAGAAAAGCCTGATGAAGAAGGCCTACGAGCTTTCCAC
CCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTTGAAACTTGGCCTCAAAATCACGATCAAATCCAGGCTATGATCCGTTCCT
ATAAATCTCACTCTTTCCCCAAACAATCCCGCAACTCCTCTTACGATCTCCAACAATTCTTCTCTGATCGCAAGAACAAAATCCAATTGAAGGAGTTGTTGGCCGCTTTG
GATTCCAAAATCGGAGTTGCAGACGGCATGATTCAGTTCATGGAGGCCGATTACGATCATTTGATTGAGGAAGCATCTGGAATTTCAAGCATTAACATACCATCATTCAA
TCCTTTCGAAACAGAACAACCCCCTAAATTAGACCTACCAGAGTTATTGATTGGGCCATATGGGTTTGAATACAATGTCGAGAAGTTCATGGAGACCGATTACGATCACT
TAATTGTGGAAGCATCTGAAATTTCAAACATTGACCCACCATCATTCAGTTCTTTTGAAACAAAGGAAACCCCTGAATTAGACATATCGGAGTTGTTGATTGGGCCAGAT
GGGTTTGAATACAATGTCGAGGAGTTCACCGAGGTCGACTACGATCACTTGATTGAGGAAACATCTAGAATTTCAAGCATTGACACACCATCATTCAGTCCTTTCGAAAT
AGAGGAACTCCCTGAAGTAGACATATCGGAGTTGTTGATTTTGGCAGATGAGTTTGAATGCAATGTCCAGGATTTTCAATCTCTATTGGAGGACGAGCTTCTCGAAACCC
TGCTTTAG
Protein sequenceShow/hide protein sequence
MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIQLKELLAAL
DSKIGVADGMIQFMEADYDHLIEEASGISSINIPSFNPFETEQPPKLDLPELLIGPYGFEYNVEKFMETDYDHLIVEASEISNIDPPSFSSFETKETPELDISELLIGPD
GFEYNVEEFTEVDYDHLIEETSRISSIDTPSFSPFEIEELPEVDISELLILADEFECNVQDFQSLLEDELLETLL