; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHomeobox Hox-B3-like protein
Genome locationchr05:5210456..5211085
RNA-Seq ExpressionLsi05G004120
SyntenyLsi05G004120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036757.1 hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-9489.1Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDH  QTHL FHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRNAMYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR
        +VAQSVPDFSA LRKENR+PPPGLSPVMEMTPPGKTWGK NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+R GGGR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR

Query:  RGKTVLGIRQI
        RGKTVLG+RQI
Subjt:  RGKTVLGIRQI

XP_022948564.1 uncharacterized protein LOC111452204 [Cucurbita moschata]3.1e-9489.1Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDH +QTHL FHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRNAMYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR
        +VAQSVPDFSA LRKENR+PPPGLSPVMEMTPPGKTWGK NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+R GGGR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR

Query:  RGKTVLGIRQI
        RGKTVLG+RQI
Subjt:  RGKTVLGIRQI

XP_022998093.1 uncharacterized protein LOC111492844 [Cucurbita maxima]4.3e-9689.05Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDHL QTHLPFHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRN+MYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR
        +VAQSVPDFS+ LRKEN++PPPGLSPVMEMTPPGKTWGK NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+RGGGRR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR

Query:  GKTVLGIRQI
        GKTVLG+RQI
Subjt:  GKTVLGIRQI

XP_023524771.1 uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]1.2e-9589.62Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDHL QTHLPFHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRNAMYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK--NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGG
        +VAQSVPDFSA LRKENR+PPPGLSPVMEMTPPGKTWGK  NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+R GGG
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK--NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGG

Query:  RRGKTVLGIRQI
        RRGKTVLG+RQI
Subjt:  RRGKTVLGIRQI

XP_038903179.1 uncharacterized protein LOC120089840 [Benincasa hispida]2.2e-10094.29Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MADKF+HLAQTHLPFHSIDPRSLLLHQNSAAD PISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRD EQPEKSTPPAKKQVKFL SET+RKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGRR
        +VAQSVPDFSA LRKENRKPPPGLSPVMEMTPPGKTWGK IGGLS NSRGSKSASAGEKRGGGL AVRKSYAGFEE+KGFSTAAANAINGENRR GGGRR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGRR

Query:  GKTVLGIRQI
        GKTVLGIRQI
Subjt:  GKTVLGIRQI

TrEMBL top hitse value%identityAlignment
A0A0A0L9P8 Uncharacterized protein9.0e-9289.52Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MA KF      HLPFHSID RSLLLHQNSAADHPISL LT EPFSMERGPRYRAYAELRESKLRLRNAMYR DE PEKSTPP KKQVKFLGSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR
        +VAQSVPDFSA LRKENRKPPPG LSPVMEMTPPGKTWGKNIGGLS  SRGSKSASAGEKRGGGL AVRKSYAGFEELKGFSTAAANAINGENR+ GGRR
Subjt:  SVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR

Query:  GKTVLGIRQI
        GKTVLG+RQI
Subjt:  GKTVLGIRQI

A0A1S3CEQ6 uncharacterized protein LOC1035001185.5e-8186.53Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAA-DHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRS
        MADKF      HLPFHSID RSLLLHQNSAA DHPISL LT EPFSMERGPRY+AYAELRESKLR RNAMYR DE PEKSTPP KKQ+KFLGSETVRKR+
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAA-DHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRS

Query:  ASVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGE
        A+VAQSVPDFSA LRKENRKPPPG LSPVMEMTPPGKTWGKN+GGLS NSRGSKSASAGEKRGGGL  VRKSYAGFEELKGFSTA A AINGE
Subjt:  ASVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGE

A0A5A7U2K6 Uncharacterized protein6.1e-8885.78Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAA-DHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRS
        MADKF      HLPFHSID RSLLLHQNSAA DHPISL LT EPFSMERGPRY+AYAELRESKLR RNAMYR DE PEKSTPP KKQ+KFLGSETVRKRS
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAA-DHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRS

Query:  ASVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGR
        A+VAQSVPDFSA LRKENRKPPPG LSPVMEMTPPGKTWGKN+GGLS NSRGSKSASAGEKRGGGL  VRKSYAGFEELKGFSTA A AINGENR+ GGR
Subjt:  ASVAQSVPDFSAALRKENRKPPPG-LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGR

Query:  RGKTVLGIRQI
        +GKTVLG RQ+
Subjt:  RGKTVLGIRQI

A0A6J1GA97 uncharacterized protein LOC1114522041.5e-9489.1Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDH +QTHL FHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRNAMYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR
        +VAQSVPDFSA LRKENR+PPPGLSPVMEMTPPGKTWGK NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+R GGGR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR-GGGR

Query:  RGKTVLGIRQI
        RGKTVLG+RQI
Subjt:  RGKTVLGIRQI

A0A6J1KFU5 uncharacterized protein LOC1114928442.1e-9689.05Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA
        MAD FDHL QTHLPFHSIDPRSLLLHQNSA  H   LQLTAE FSMERGPRYRAYAELRESKLRLRN+MYRD EQPEKSTPPAKKQV+F+GSETVRKRSA
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSA

Query:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR
        +VAQSVPDFS+ LRKEN++PPPGLSPVMEMTPPGKTWGK NIGG+S NSRGSKSASAGEKRGGGLAA RKSYAGFEELKGFSTAAANAINGEN+RGGGRR
Subjt:  SVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGK-NIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR

Query:  GKTVLGIRQI
        GKTVLG+RQI
Subjt:  GKTVLGIRQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67035.1 unknown protein4.8e-1335.44Show/hide
Query:  SLLLHQNSAADHPISLQLTAE--PFSMERGPRYRAYAELRESKLRLRNAMYR-----------DDEQPEKSTPPAKKQVKFLGSE--TVRKRSASVAQSV
        SLL   N  +D    L+L  +   +  ERG RY  YA LRESKLR++    +             E+  +  P  K +  F  ++  T    S+S+AQSV
Subjt:  SLLLHQNSAADHPISLQLTAE--PFSMERGPRYRAYAELRESKLRLRNAMYR-----------DDEQPEKSTPPAKKQVKFLGSE--TVRKRSASVAQSV

Query:  PDFSAALRKENRKPPPG---LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRRGKTV
        PDFS+ +RKENR+PP     L    E+TPP               RGS SASAGEK+GG     RKS                        GGG  G+T+
Subjt:  PDFSAALRKENRKPPPG---LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRRGKTV

Query:  LGIRQI
        LG RQI
Subjt:  LGIRQI

AT1G67035.2 unknown protein2.4e-2038.81Show/hide
Query:  SLLLHQNSAADHPISLQLTAE--PFSMERGPRYRAYAELRESKLRLRNAMYR-----------DDEQPEKSTPPAKKQVKFLGSE--TVRKRSASVAQSV
        SLL   N  +D    L+L  +   +  ERG RY  YA LRESKLR++    +             E+  +  P  K +  F  ++  T    S+S+AQSV
Subjt:  SLLLHQNSAADHPISLQLTAE--PFSMERGPRYRAYAELRESKLRLRNAMYR-----------DDEQPEKSTPPAKKQVKFLGSE--TVRKRSASVAQSV

Query:  PDFSAALRKENRKPPPG---LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR---------
        PDFS+ +RKENR+PP     L    E+TPP               RGS SASAGEK+G G+  +RKSYA  ++LK  S AAA+AING   +         
Subjt:  PDFSAALRKENRKPPPG---LSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRR---------

Query:  ----GGGRRGKTVLGIRQI
            GGG  G+T+LG RQI
Subjt:  ----GGGRRGKTVLGIRQI

AT5G38300.1 unknown protein2.9e-2639.26Show/hide
Query:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFS-MERGPRYRAYAELRESKLRLRNAMYRD-DEQPEKSTPPAKKQVKFLGS------
        MAD   +     L F S+DP SL+L QNS       L+L  + FS  ERGPRY  Y+ LRESKLR++    +  +E+ E   P  KKQV+F G+      
Subjt:  MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFS-MERGPRYRAYAELRESKLRLRNAMYRD-DEQPEKSTPPAKKQVKFLGS------

Query:  ----------------------------ETVRKRS------------ASVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGKNIGGL--SMNSRG
                                    E V+K+S            +S+AQSVPDFSA +RKENR+P      +  +TPP  T     GG+     SRG
Subjt:  ----------------------------ETVRKRS------------ASVAQSVPDFSAALRKENRKPPPGLSPVMEMTPPGKTWGKNIGGL--SMNSRG

Query:  SKSASAGEKRGGG---LAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR--------GKTVLGIRQI
        SKSASAGEK+  G   +   RKSYA  E+LK  S AAA+AING    GGG R         +T+LG RQI
Subjt:  SKSASAGEKRGGG---LAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRR--------GKTVLGIRQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACAAATTCGACCATCTCGCTCAAACCCATCTCCCCTTCCACTCCATCGACCCCAGATCTCTCCTTCTCCACCAGAACTCTGCCGCCGATCACCCCATTTCTCT
CCAGCTCACAGCCGAGCCTTTTTCGATGGAAAGAGGGCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGGTTGAGAAACGCGATGTACCGCGATGACG
AACAGCCGGAAAAGTCCACGCCGCCGGCGAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTTCGAAAAAGGTCGGCGTCGGTGGCGCAATCGGTACCGGATTTCTCT
GCAGCGCTGAGAAAGGAGAACAGAAAGCCGCCGCCGGGGTTGTCGCCGGTGATGGAGATGACGCCACCAGGGAAGACGTGGGGGAAGAACATTGGGGGATTGTCGATGAA
TTCAAGGGGGAGTAAGTCGGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGGCGGCGGTGAGGAAGAGCTACGCCGGATTTGAGGAGCTGAAAGGGTTTTCTACAGCGG
CGGCGAATGCCATTAATGGTGAAAATAGGAGAGGAGGAGGAAGGAGAGGGAAGACGGTATTGGGAATTAGGCAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACAAATTCGACCATCTCGCTCAAACCCATCTCCCCTTCCACTCCATCGACCCCAGATCTCTCCTTCTCCACCAGAACTCTGCCGCCGATCACCCCATTTCTCT
CCAGCTCACAGCCGAGCCTTTTTCGATGGAAAGAGGGCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGGTTGAGAAACGCGATGTACCGCGATGACG
AACAGCCGGAAAAGTCCACGCCGCCGGCGAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTTCGAAAAAGGTCGGCGTCGGTGGCGCAATCGGTACCGGATTTCTCT
GCAGCGCTGAGAAAGGAGAACAGAAAGCCGCCGCCGGGGTTGTCGCCGGTGATGGAGATGACGCCACCAGGGAAGACGTGGGGGAAGAACATTGGGGGATTGTCGATGAA
TTCAAGGGGGAGTAAGTCGGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGGCGGCGGTGAGGAAGAGCTACGCCGGATTTGAGGAGCTGAAAGGGTTTTCTACAGCGG
CGGCGAATGCCATTAATGGTGAAAATAGGAGAGGAGGAGGAAGGAGAGGGAAGACGGTATTGGGAATTAGGCAAATTTGA
Protein sequenceShow/hide protein sequence
MADKFDHLAQTHLPFHSIDPRSLLLHQNSAADHPISLQLTAEPFSMERGPRYRAYAELRESKLRLRNAMYRDDEQPEKSTPPAKKQVKFLGSETVRKRSASVAQSVPDFS
AALRKENRKPPPGLSPVMEMTPPGKTWGKNIGGLSMNSRGSKSASAGEKRGGGLAAVRKSYAGFEELKGFSTAAANAINGENRRGGGRRGKTVLGIRQI