; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic
Genome locationchr05:5213207..5216923
RNA-Seq ExpressionLsi05G004130
SyntenyLsi05G004130
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR001328 - Peptidyl-tRNA hydrolase
IPR018171 - Peptidyl-tRNA hydrolase, conserved site
IPR036416 - Peptidyl-tRNA hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607055.1 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-12585.87Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SV SVCLFSNSS AHF SR  K LV T LS+RASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKFSSVERK                     QIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKYHKV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

XP_004145630.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis sativus]1.3e-12485.56Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG
        ML+A S QSV LFSNSS+AHFH  STKPLVST LS+RAS PD+D NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG

Query:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
        IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRH+LLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
Subjt:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL

Query:  LQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        LQKFSSVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNL+QKYKYHKV
Subjt:  LQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

XP_008461557.1 PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucumis melo]5.5e-12887.82Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI
        MLYA S QSV LFSNSSTAH+HS STKPLVST LS+RASLP  DN+NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI

Query:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
        GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
Subjt:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF

Query:  LLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        LLQKFSSVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNL+QKYKYHKV
Subjt:  LLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

XP_023523313.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo]3.3e-12586.25Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SV SVCLFSNSS AHF SR  K LV T LS+RASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKFSSVERK                     QIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKYHKV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

XP_038899626.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Benincasa hispida]5.7e-13390.33Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SVQSVCLFSNSSTAHFH RSTKPLVST LS+RASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKFSSVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNLTQKYKYHKV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

TrEMBL top hitse value%identityAlignment
A0A0A0LCC6 Uncharacterized protein6.1e-12585.56Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG
        ML+A S QSV LFSNSS+AHFH  STKPLVST LS+RAS PD+D NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIG

Query:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
        IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRH+LLTYDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL
Subjt:  IGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFL

Query:  LQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        LQKFSSVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNL+QKYKYHKV
Subjt:  LQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

A0A1S3CFG5 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic2.7e-12887.82Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI
        MLYA S QSV LFSNSSTAH+HS STKPLVST LS+RASLP  DN+NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALI

Query:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
        GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF
Subjt:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAF

Query:  LLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        LLQKFSSVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNL+QKYKYHKV
Subjt:  LLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

A0A6J1D2Z6 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like3.0e-12485.87Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SVQSVCL SNSS+AHF  R  K LV T LS+RASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKF SVERK                     QIDAALEQGVEAVRTLALNGFSQ VNRFNLTQKYKY+KV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

A0A6J1G9M7 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like1.0e-12485.5Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SV SVCLFSNSS AHF SR  K LV T LS+RASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKFSSVERK                     QIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKYHKV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

A0A6J1K6X4 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like8.0e-12585.87Show/hide
Query:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
        MLYA SV SVCLFSNSS+AHF SR  K LV T LS+RASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL

Query:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
        QKFSSVERK                     QIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKYHKV
Subjt:  QKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

SwissProt top hitse value%identityAlignment
Q5ZCL8 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic3.9e-8464.63Show/hide
Query:  PLVSTTLSLR----ASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGES
        PL  T L  R    AS+PD       EYTPWLI GLGNPG+KYHGTRHNVGFEM+D IA+ +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE+
Subjt:  PLVSTTLSLR----ASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGES

Query:  VGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFM
        +GPLAA+YQ+PLRHIL+ YDEMSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQKFSS ER               
Subjt:  VGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFM

Query:  TIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
               QID ALEQGV+AVRTL L GFS S+ RFNL QKYK+H V
Subjt:  TIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

Q6NLS8 Peptidyl-tRNA hydrolase, mitochondrial3.2e-6253.21Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++LAKPQTYMN  GES GPLAA+Y++PL  +L+ +D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNG
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKFS   R                     +++D AL +GV+A++ +    
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNG

Query:  FSQSVNRFNLTQKYKYHK
        F +S   FN+ QKYK+ K
Subjt:  FSQSVNRFNLTQKYKYHK

Q9FKN4 Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic7.5e-8869.07Show/hide
Query:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        SLRASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID
        PLRHIL+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+                     D
Subjt:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID

Query:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
          LEQGVE V+TL   GFS S++RFNL QKYK+HKV
Subjt:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic5.9e-9373.01Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL+ YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKFS +E+K                     QI+ ALEQG EAV
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV

Query:  RTLALNGFSQSVNRFNLTQKYKYHKV
        +TL LNGF+Q ++RFNL QKYK+HKV
Subjt:  RTLALNGFSQSVNRFNLTQKYKYHKV

Q9M5P4 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic8.3e-8764.96Show/hide
Query:  SSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQT
        S TA  H R  +P   T +S   S+PD   G  VEYTPWLI GLGNPGNKY+GTRHNVGFEM+D IA  +GI MNTIQSK+L+GIGSIGEVP+L+ KPQ+
Subjt:  SSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQT

Query:  YMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEH
        YMN+ GE++GPLAA+YQ+PLRHILL YD+ SLPNGVLRLQ KGGHG HNG+++V+ HLDGRREFPRL IGIG+PPG MD +AFLLQKFSS ER       
Subjt:  YMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEH

Query:  HCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
                       QID ALEQGV+AVRTL L GFS S  RFNL QKYK+H+V
Subjt:  HCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

Arabidopsis top hitse value%identityAlignment
AT5G16140.1 Peptidyl-tRNA hydrolase family protein4.2e-9473.01Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL+ YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKFS +E+K                     QI+ ALEQG EAV
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV

Query:  RTLALNGFSQSVNRFNLTQKYKYHKV
        +TL LNGF+Q ++RFNL QKYK+HKV
Subjt:  RTLALNGFSQSVNRFNLTQKYKYHKV

AT5G16140.2 Peptidyl-tRNA hydrolase family protein4.2e-9473.01Show/hide
Query:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD
        D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID +A+ +G+LMNTIQSKALIGIG+I +VPILLAKPQTYMNF GESVG LA+HY++PLRHIL+ YD
Subjt:  DNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYD

Query:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV
        EM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MDMKAFLLQKFS +E+K                     QI+ ALEQG EAV
Subjt:  EMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAV

Query:  RTLALNGFSQSVNRFNLTQKYKYHKV
        +TL LNGF+Q ++RFNL QKYK+HKV
Subjt:  RTLALNGFSQSVNRFNLTQKYKYHKV

AT5G19830.1 Peptidyl-tRNA hydrolase family protein2.3e-6353.21Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GFEMID  A++ GI MN +  KA++G G + ++P++LAKPQTYMN  GES GPLAA+Y++PL  +L+ +D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNG
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKFS   R                     +++D AL +GV+A++ +    
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQIDAALEQGVEAVRTLALNG

Query:  FSQSVNRFNLTQKYKYHK
        F +S   FN+ QKYK+ K
Subjt:  FSQSVNRFNLTQKYKYHK

AT5G38290.1 Peptidyl-tRNA hydrolase family protein5.3e-8969.07Show/hide
Query:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        SLRASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID
        PLRHIL+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+                     D
Subjt:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID

Query:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
          LEQGVE V+TL   GFS S++RFNL QKYK+HKV
Subjt:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV

AT5G38290.2 Peptidyl-tRNA hydrolase family protein5.3e-8969.07Show/hide
Query:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI
        SLRASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GFEMID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLAA+YQI
Subjt:  SLRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQI

Query:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID
        PLRHIL+ YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MDMKAFLLQKFS +ERKQ+                     D
Subjt:  PLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQIFMTIVCSTQQID

Query:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV
          LEQGVE V+TL   GFS S++RFNL QKYK+HKV
Subjt:  AALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATATGCAACATCCGTCCAAAGTGTTTGCTTATTTTCCAATTCGAGTACTGCCCATTTCCATTCTCGTTCCACAAAGCCTCTGGTCTCGACGACGCTCTCTCTACG
AGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACACCTTGGCTTATTGTTGGACTGGGTAACCCAGGAAACAAGTATCACGGGACTCGGCACAATGTTG
GTTTCGAAATGATTGATAGCATTGCTCAAGCGCAGGGTATTTTGATGAACACAATACAATCCAAAGCTCTGATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTGTTG
GCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCTCTTGCTGCACATTATCAAATACCTTTACGGCACATCTTGTTGACTTATGATGAAATGAGCTT
GCCAAATGGCGTTCTTAGGCTCCAGCCAAAAGGAGGACACGGCCATCACAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGTCGACGCGAGTTTCCTCGGCTATGCA
TCGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGCTGGTGGTAGAGCACCATTGCGTTGTACAA
ATTTTTATGACTATTGTTTGCTCAACCCAACAGATCGATGCAGCCCTTGAACAAGGAGTCGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGCGTGAATAG
ATTCAATTTGACCCAGAAATACAAGTATCACAAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAGCCCCTTCTTCTTCAGTTCTTCCTCTTCAGGGAGGTTTGGGTGTGTTCTTCTTCTTCTTCTACTTCTACGGCTTTAACAACGTCCACCGCTGCT
TCTGCTCGAATTCAACTTCCTTTCAACTAAACCATCCAATTTACACGCAGGTTTCAATGTTATATGCAACATCCGTCCAAAGTGTTTGCTTATTTTCCAATTCGAGTACT
GCCCATTTCCATTCTCGTTCCACAAAGCCTCTGGTCTCGACGACGCTCTCTCTACGAGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACACCTTGGCT
TATTGTTGGACTGGGTAACCCAGGAAACAAGTATCACGGGACTCGGCACAATGTTGGTTTCGAAATGATTGATAGCATTGCTCAAGCGCAGGGTATTTTGATGAACACAA
TACAATCCAAAGCTCTGATTGGAATAGGTTCAATTGGAGAAGTACCAATTTTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGCGGAGAATCGGTTGGACCTCTTGCT
GCACATTATCAAATACCTTTACGGCACATCTTGTTGACTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAAGGAGGACACGGCCATCACAATGG
GGTGAAGAGTGTAATGGGACATCTGGATGGTCGACGCGAGTTTCCTCGGCTATGCATCGGAATTGGAAACCCACCTGGGACTATGGACATGAAAGCTTTTCTCCTGCAGA
AGTTCAGTTCAGTTGAGCGAAAACAGCTGGTGGTAGAGCACCATTGCGTTGTACAAATTTTTATGACTATTGTTTGCTCAACCCAACAGATCGATGCAGCCCTTGAACAA
GGAGTCGAGGCAGTGAGAACCCTTGCACTGAATGGATTTAGCCAAAGCGTGAATAGATTCAATTTGACCCAGAAATACAAGTATCACAAGGTTTGA
Protein sequenceShow/hide protein sequence
MLYATSVQSVCLFSNSSTAHFHSRSTKPLVSTTLSLRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL
AKPQTYMNFCGESVGPLAAHYQIPLRHILLTYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQLVVEHHCVVQ
IFMTIVCSTQQIDAALEQGVEAVRTLALNGFSQSVNRFNLTQKYKYHKV