CuGenDBv2

Gene ID	Lsi05G004200
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	transportin-3 isoform X1
Genome location	chr05:5342027..5367097
RNA-Seq Expression	Lsi05G004200
Synteny	Lsi05G004200
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449959.1 PREDICTED: transportin-3 isoform X1 [Cucumis melo]

1.7e-301

78.05

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +V+ESAFN+ERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQ+FDF VITQLVTML+ARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFE PNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE+  NYGHMQGKGGRVLKRLVREFADGHRNIPN+T
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

XP_008449960.1 PREDICTED: transportin-3 isoform X2 [Cucumis melo]

1.7e-301

78.05

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +V+ESAFN+ERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQ+FDF VITQLVTML+ARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFE PNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE+  NYGHMQGKGGRVLKRLVREFADGHRNIPN+T
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

XP_011651341.1 transportin-3 isoform X1 [Cucumis sativus]

2.1e-299

77.52

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGMIDLPDGLIHFRMNIVELLVD+CQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVTML+ARPSNEIKG+MCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESV SHACAFALRKICEDATAVIFELPNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AA+GSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLAS+LEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKP+LRWESLHGWLLSAVQALPLEYLKPGEVE+LVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNI
        SCDE   NYGHMQGKGGRVLKRLVREFADGHRN+
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNI

XP_011651344.1 transportin-3 isoform X3 [Cucumis sativus]

2.1e-299

77.52

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGMIDLPDGLIHFRMNIVELLVD+CQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVTML+ARPSNEIKG+MCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESV SHACAFALRKICEDATAVIFELPNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AA+GSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLAS+LEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKP+LRWESLHGWLLSAVQALPLEYLKPGEVE+LVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNI
        SCDE   NYGHMQGKGGRVLKRLVREFADGHRN+
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNI

XP_038891351.1 transportin-3 [Benincasa hispida]

6.9e-303

78.59

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDN  SLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVIR
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLL AVQALPLEYLKPGEVETLVPLWLKA GDAA DYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE  TNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BN70 transportin-3 isoform X1

8.2e-302

78.05

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +V+ESAFN+ERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQ+FDF VITQLVTML+ARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFE PNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE+  NYGHMQGKGGRVLKRLVREFADGHRNIPN+T
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

A0A1S3BNV6 transportin-3 isoform X2

8.2e-302

78.05

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +V+ESAFN+ERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQ+FDF VITQLVTML+ARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFE PNLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI 
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLESK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE+  NYGHMQGKGGRVLKRLVREFADGHRNIPN+T
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

A0A6J1D4H9 transportin MOS14 isoform X3

3.6e-297

76.69

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGM+DLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPW+EVE KLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVT+LSARPSNEIKG+MCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIW+GE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDP+FSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               ASVIVEEYGHQEKFGHLFITTFERFTYAASV AINSSYICDQEPDLVEAYTNFASIF+RCSHKEIL
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
        AASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLE AS  SEG F+SMVIR
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        V+SHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICS+SERTDLK VLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAA DYL+SK
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT
        SCDE   NYGHMQGKGGRVLKRLVREFADGHRNIPNVT
Subjt:  SCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

A0A6J1F1T5 transportin-3 isoform X1

6.7e-296

77.24

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGMIDLPDGLIHFRMN VELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKG+MCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFEL NLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNA SLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTE T DDPMFSLLIVFWPMLEKLLRCEHMENGNLS AACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYG-HQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEI
        QSS                               ASVIVEEYG HQEKFGHLFITTFERFTYAASV+AINSSYICDQEPDLVEAY+NFASIFLRCSHKEI
Subjt:  QSS-------------------------------ASVIVEEYG-HQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEI

Query:  LAASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVI
        LAASGSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI
Subjt:  LAASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVI

Query:  RVLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLES
         VLSHSGEGLVSNILYALLGVSAMSRVHKCAT+LQQLAAICSVSERTDLK VLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLES
Subjt:  RVLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLES

Query:  KSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNV
        KSCDE  TNYGHMQGKGGRVLKRLVREFADGHRNI NV
Subjt:  KSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNV

A0A6J1J969 transportin-3 isoform X1

1.7e-294

76.83

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +VVESAFN+ERGMIDLPDGLIHFRMN VELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNV                        
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     VAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKG+MCLVYRSLAEVVGSYFRSIS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
        AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFEL NLEILIWIGE       SLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSYEAIEKLVDEDNA SLRQNPA YTKILTSAVRGLYRMGTVFSHLATSLSTE + DDPMFSLLIVFWPMLEKLLRCEHMENGNLS AACRALSLAI
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYG-HQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEI
        QSS                               ASVI+EEYG HQEKFGHLFITTFERFTYAASV+AINSSYICDQEPDLVEAY NFASIFLRCSHKEI
Subjt:  QSS-------------------------------ASVIVEEYG-HQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEI

Query:  LAASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVI
        LAA GSLLEVSFQKAAICCTAMHRGAAL+AMSYLSC                                      FLDVSLASMLEFAS NSEGSFNSMVI
Subjt:  LAASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVI

Query:  RVLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLES
         VLSHSGEGLVSNILYALLGVSAMSRVHKCAT+LQQLAAICSVSERTDLK VLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKA GDAACDYLES
Subjt:  RVLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLES

Query:  KSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNV
        KSCDE  TNYGHMQGKGGRVLKRLVREFADGHRNI NV
Subjt:  KSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12930.1 ARM repeat superfamily protein

6.6e-195

52.03

Show/hide

Query:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS
        LR +V E   +DE   +DLPDGL+HFR N++ELLVDICQ+L  + F+ KLFF G  + +V +P +E+E+KLFAL                          
Subjt:  LRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCS

Query:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS
                                                     V+E++LQEG++FDF++I QLV+  S RPS+E+KG + +VYRSLA+VVGSY R IS
Subjt:  SQVLGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSIS

Query:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR
         F ++ARPLLLFLA GI+E + SHACA ALRKICEDA AVI E  NL+IL+WIGE        LE+  L LEDEEEV++A+++ILGSV NKEL++ LL +
Subjt:  AFHTDARPLLLFLATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLAR

Query:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI
        LLSSSY  + KLVDED   S RQ+PA YT++L+S  RGLYR+GTVFSHLATSL + P  D P+ SLL VFWP+LEKL R EHME+G+L+AAACRALS+A+
Subjt:  LLSSSYEAIEKLVDEDNALSLRQNPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAI

Query:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL
        QSS                               A VI EE+ H+E++G LFITTFERFT A+S+  INSSYICDQEPDLVEAY NFAS  +R  HKE+L
Subjt:  QSS-------------------------------ASVIVEEYGHQEKFGHLFITTFERFTYAASVSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEIL

Query:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR
          SG+LLE+SF KAAICCTAMHRGAAL+AMSY                                      LS FL+VSL+SM+E  ++ S+GSF+ + ++
Subjt:  AASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSFLDVSLASMLEFASNNSEGSFNSMVIR

Query:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK
        V+SH GEGL+SN++YALLGV+AMSRVHKC+TILQQLAAICS+ ERT  K +L W+SL GWL SAV ALP EYLK GE E++V  W +A G A  DYLE+K
Subjt:  VLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESK

Query:  SCD--EDNTNYGHMQGKGGRVLKRLVREFADGHRNIPN
        SC+   +N++ GHMQGK GR LKRLVR+FAD HRN PN
Subjt:  SCD--EDNTNYGHMQGKGGRVLKRLVREFADGHRNIPN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGATAGGATTGCAACTTTACGCAAGGAGGTGGTTGAATCTGCTTTCAACGATGAAAGAGGAATGATAGACCTACCTGATGGTCTTATCCATTTTAGAATGAATAT
CGTTGAGCTTCTGGTGGATATTTGTCAAATTTTAAGGTCTTCCAGATTTATGGAAAAGCTCTTCTTCAGTGGTTGGACCAATGGTAATGTACCAATTCCTTGGAAGGAAG
TGGAGAGCAAATTATTTGCTCTTAATGTGGTGAGGCAACATACCTTCTGTTTTGTTTTGTTTCTTATATTAGTAGATGTGGCCAACTGGGGATCATGTAGCTCCCAGGTC
CTTGGTCCATTGCTGAGCTATCCCTATGATACTCTGCCGATTTCTACTCTTAGAATGCTTTATCTATCAACTGAGGATGAGAGTAATCACCAGTGGCCAAAGCAATTTTG
CAGTGATGGACAATATGTTGCTGAGGTAGTCCTACAGGAGGGTCAAAGCTTTGATTTCTCCGTTATCACGCAACTGGTGACCATGCTATCAGCTAGACCTTCAAATGAGA
TTAAAGGCGTAATGTGCCTTGTTTATAGATCCTTGGCAGAAGTTGTTGGATCTTACTTTAGGTCAATATCTGCTTTTCACACTGATGCCAGACCCTTGCTATTATTTCTT
GCTACTGGGATCACAGAATCTGTCTCTTCACATGCTTGTGCCTTCGCCCTCCGTAAAATTTGTGAAGATGCAACTGCTGTAATCTTTGAACTGCCAAATTTGGAAATTTT
GATTTGGATCGGAGAGGTAATATTCTGTCTGATTACTAGTCTGGAGAAGTTGCATTTACCTTTGGAGGACGAGGAAGAAGTAGTGAGTGCTGTAAGTTTGATTCTTGGTT
CGGTTCCTAATAAAGAACTGAAGAGCAACTTGTTGGCTAGACTACTTTCATCAAGTTATGAAGCAATTGAGAAACTAGTTGATGAAGATAACGCACTATCTCTGAGACAA
AATCCTGCTGCTTACACGAAAATCTTAACCTCTGCTGTGAGGGGCCTGTATAGGATGGGAACTGTATTTAGCCATCTAGCTACGTCTTTGTCCACTGAGCCTACTCTGGA
TGATCCTATGTTTTCTTTGTTGATAGTTTTCTGGCCAATGCTAGAGAAACTTCTAAGATGTGAACATATGGAGAATGGTAATCTCTCTGCAGCAGCTTGTCGTGCTCTAT
CTCTAGCCATTCAGTCTTCAGCTTCAGTTATTGTTGAAGAATATGGCCATCAAGAAAAATTTGGGCATTTGTTTATCACCACTTTTGAAAGGTTTACTTATGCAGCATCC
GTAAGTGCTATTAATTCCTCGTACATATGTGACCAAGAACCTGATCTAGTGGAGGCTTACACAAATTTTGCATCAATTTTTCTCCGATGCTCTCATAAGGAAATATTAGC
TGCATCTGGTTCTCTTTTGGAGGTTTCATTCCAGAAGGCTGCTATATGTTGCACAGCCATGCATCGTGGGGCAGCGTTATCTGCAATGTCATACCTATCTTGTAGTAAGA
TTTTCACTTCAAAGACATGTGGAGTCATTTGTGGAGCAATTTCTTCTTGGGCTTTAAAGGATATGGACACAGGTGTCTTCCAAACCCTAGCCGTCCGTCTCTCAAGTTTC
TTGGATGTTAGTCTAGCATCAATGTTAGAATTTGCAAGTAACAATTCTGAGGGATCATTCAATTCTATGGTTATTCGCGTCCTATCCCACAGCGGCGAGGGACTTGTATC
CAACATTCTGTATGCTTTGCTTGGTGTTTCAGCAATGTCACGGGTTCACAAGTGTGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACGGACT
TGAAACCTGTCCTGCGCTGGGAATCTTTGCATGGCTGGCTACTATCAGCGGTGCAGGCTCTCCCACTTGAGTATTTAAAACCAGGGGAAGTAGAAACTCTTGTGCCACTA
TGGTTAAAGGCTTTTGGAGATGCAGCCTGTGACTACCTTGAAAGTAAAAGTTGTGATGAAGACAATACTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAA
GCGTCTAGTTCGTGAATTTGCTGATGGTCACCGCAATATTCCAAATGTGACTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MADRIATLRKEVVESAFNDERGMIDLPDGLIHFRMNIVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVRQHTFCFVLFLILVDVANWGSCSSQV
LGPLLSYPYDTLPISTLRMLYLSTEDESNHQWPKQFCSDGQYVAEVVLQEGQSFDFSVITQLVTMLSARPSNEIKGVMCLVYRSLAEVVGSYFRSISAFHTDARPLLLFL
ATGITESVSSHACAFALRKICEDATAVIFELPNLEILIWIGEVIFCLITSLEKLHLPLEDEEEVVSAVSLILGSVPNKELKSNLLARLLSSSYEAIEKLVDEDNALSLRQ
NPAAYTKILTSAVRGLYRMGTVFSHLATSLSTEPTLDDPMFSLLIVFWPMLEKLLRCEHMENGNLSAAACRALSLAIQSSASVIVEEYGHQEKFGHLFITTFERFTYAAS
VSAINSSYICDQEPDLVEAYTNFASIFLRCSHKEILAASGSLLEVSFQKAAICCTAMHRGAALSAMSYLSCSKIFTSKTCGVICGAISSWALKDMDTGVFQTLAVRLSSF
LDVSLASMLEFASNNSEGSFNSMVIRVLSHSGEGLVSNILYALLGVSAMSRVHKCATILQQLAAICSVSERTDLKPVLRWESLHGWLLSAVQALPLEYLKPGEVETLVPL
WLKAFGDAACDYLESKSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT

Lsi05G004200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome