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Lsi05G004260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:5432762..5433235
RNA-Seq ExpressionLsi05G004260
SyntenyLsi05G004260
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048544.1 hypothetical protein E6C27_scaffold61G001730 [Cucumis melo var. makuwa]7.3e-4880.13Show/hide
Query:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAESSG
        MVKQM +AL  +VKRKARALKARLI+YSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ETEQETGV  +YE   E   E EAEAEAE+SG
Subjt:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAESSG

Query:  SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        SVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNRS QE+LFR
Subjt:  SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

XP_008450196.1 PREDICTED: uncharacterized protein LOC103491856 [Cucumis melo]2.8e-4777.99Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAE
        +  MVKQM +AL  +VKRKARALKARLI+YSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ETEQETGV  +YE       E EAEAEAE
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAE

Query:  SSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        +SGSVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNRS QE+LFR
Subjt:  SSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

XP_011651332.1 uncharacterized protein LOC105434868 [Cucumis sativus]2.1e-4777.91Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQ----ETGVCQEYEPETEPAPEPEAE
        +  MVKQM +ALR MVKRKARALKARLIIYSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ET+Q    ETGVC +YE       E EAE
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQ----ETGVCQEYEPETEPAPEPEAE

Query:  AEAESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        AEA +SGSVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS QE+LFR
Subjt:  AEAESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

XP_022928439.1 uncharacterized protein LOC111435250 [Cucurbita moschata]8.1e-3160.48Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPEPEAE----A
        +  MVKQMA  LR MVKRKARALKARLIIYSLLAQSNF VSSIPL+T++   +Q   Q + L+  Q+     E+ETG     E   E   E  AE    A
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPEPEAE----A

Query:  EAESSG--------SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML
        E E+          SVIEMVK+SKE+AGEEFSLEKDID VADLFIRNFH QMRMQKQNSLNR  +ML
Subjt:  EAESSG--------SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML

XP_038904099.1 uncharacterized protein LOC120090474 [Benincasa hispida]1.2e-5584.71Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHH-QQHSQLQPLQDQVTETEQETGVCQEYEPETEPA--PEPEAEAEAES
        +  MVKQM SALR MVKRKARALKARLI+YSLLAQSNF VSSIPLTT+STHHH QQHSQLQ +QDQV ETEQETGVCQ+YE E E     E EAEAEAE+
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHH-QQHSQLQPLQDQVTETEQETGVCQEYEPETEPA--PEPEAEAEAES

Query:  SGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLF
        SGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS QE+LF
Subjt:  SGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLF

TrEMBL top hitse value%identityAlignment
A0A0A0LCA7 Uncharacterized protein1.0e-4777.91Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQ----ETGVCQEYEPETEPAPEPEAE
        +  MVKQM +ALR MVKRKARALKARLIIYSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ET+Q    ETGVC +YE       E EAE
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQ----ETGVCQEYEPETEPAPEPEAE

Query:  AEAESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        AEA +SGSVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS QE+LFR
Subjt:  AEAESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

A0A1S3BPP6 uncharacterized protein LOC1034918561.3e-4777.99Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAE
        +  MVKQM +AL  +VKRKARALKARLI+YSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ETEQETGV  +YE       E EAEAEAE
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAE

Query:  SSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        +SGSVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNRS QE+LFR
Subjt:  SSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

A0A5A7TZT4 Uncharacterized protein3.5e-4880.13Show/hide
Query:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAESSG
        MVKQM +AL  +VKRKARALKARLI+YSLLAQSNFFV SSIPLTT+STHHH QQHSQLQ + +  QV ETEQETGV  +YE   E   E EAEAEAE+SG
Subjt:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFV-SSIPLTTLSTHHH-QQHSQLQPLQD--QVTETEQETGVCQEYEPETEPAPEPEAEAEAESSG

Query:  SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR
        SVIEMVK+SKEKAGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNRS QE+LFR
Subjt:  SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRS-QEMLFR

A0A6J1EKV0 uncharacterized protein LOC1114352503.9e-3160.48Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPEPEAE----A
        +  MVKQMA  LR MVKRKARALKARLIIYSLLAQSNF VSSIPL+T++   +Q   Q + L+  Q+     E+ETG     E   E   E  AE    A
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPEPEAE----A

Query:  EAESSG--------SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML
        E E+          SVIEMVK+SKE+AGEEFSLEKDID VADLFIRNFH QMRMQKQNSLNR  +ML
Subjt:  EAESSG--------SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML

A0A6J1JR68 uncharacterized protein LOC1114867275.7e-3058.48Show/hide
Query:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPE---------
        +  MVKQMA  LR MVKRKARALKARLIIYSLLAQSNF VSSIPL+T+    +Q   Q ++L+  Q+     E+ETG     E   E   E         
Subjt:  MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQ---QHSQLQPLQDQVTETEQETGVCQEYEPETEPAPE---------

Query:  ---PEAEAEA----ESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML
            E E EA     +  SVIEMVK+SKE+AGEEFSLEKDID VADLFIRNFH QMRMQKQNSLNR  +ML
Subjt:  ---PEAEAEA----ESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G13880.1 unknown protein2.0e-1140.13Show/hide
Query:  VKRKARALKARLIIYSLLAQSNFFVSSIP------LTTLSTHHHQQHSQ------LQPLQDQVTETEQETGVCQEYEPE-TEPAPEPEAEAEA-------
        +KRK RA K RL+I+SLL   +  V S+        T+    H  +  Q      +  +  Q       T V    + + TE   + E E E        
Subjt:  VKRKARALKARLIIYSLLAQSNFFVSSIP------LTTLSTHHHQQHSQ------LQPLQDQVTETEQETGVCQEYEPE-TEPAPEPEAEAEA-------

Query:  --ESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSL
          E+ GSVIEMVKHSKE  GEEF LE +ID VADLFI  FH+QM +QKQ SL
Subjt:  --ESSGSVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSL

AT5G47920.1 unknown protein1.7e-1035.59Show/hide
Query:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQQHSQLQPLQDQ---------VTETEQETGVCQE----YEPETEPAP---
        ++  MA A    +K K  A K R+++ SL+        SI   +   HH   H+      DQ         +  ++  T    E    +E E++  P   
Subjt:  MVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQQHSQLQPLQDQ---------VTETEQETGVCQE----YEPETEPAP---

Query:  -------EPEAEAEAESSG-SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEMLFRGT
               E   + E E  G SVI+MV+ SKE+ GE F LE +IDHVADLFI  FH+QM++QK  S  R QEML RGT
Subjt:  -------EPEAEAEAESSG-SVIEMVKHSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEMLFRGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGATGGTGAAGCAGATGGCAAGTGCTTTGAGAGGTATGGTGAAAAGGAAAGCCCGTGCTCTTAAAGCTCGTCTCATAATCTACTCATTGTTAGCCCAATCTAA
CTTCTTTGTTTCCTCCATTCCTTTAACAACACTCTCTACTCATCACCATCAACAACATTCCCAATTACAACCACTTCAAGATCAAGTAACAGAAACAGAGCAAGAAACAG
GGGTGTGTCAGGAATATGAACCAGAAACAGAACCAGCACCAGAACCAGAAGCAGAAGCAGAAGCAGAATCAAGTGGGTCAGTAATTGAGATGGTGAAGCATTCCAAGGAG
AAAGCAGGAGAAGAATTCAGTCTTGAAAAAGATATTGATCATGTTGCTGATTTGTTCATAAGAAATTTCCATCAACAGATGAGGATGCAGAAGCAGAATTCTCTTAATAG
ATCCCAAGAAATGCTTTTTCGTGGAACCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGATGGTGAAGCAGATGGCAAGTGCTTTGAGAGGTATGGTGAAAAGGAAAGCCCGTGCTCTTAAAGCTCGTCTCATAATCTACTCATTGTTAGCCCAATCTAA
CTTCTTTGTTTCCTCCATTCCTTTAACAACACTCTCTACTCATCACCATCAACAACATTCCCAATTACAACCACTTCAAGATCAAGTAACAGAAACAGAGCAAGAAACAG
GGGTGTGTCAGGAATATGAACCAGAAACAGAACCAGCACCAGAACCAGAAGCAGAAGCAGAAGCAGAATCAAGTGGGTCAGTAATTGAGATGGTGAAGCATTCCAAGGAG
AAAGCAGGAGAAGAATTCAGTCTTGAAAAAGATATTGATCATGTTGCTGATTTGTTCATAAGAAATTTCCATCAACAGATGAGGATGCAGAAGCAGAATTCTCTTAATAG
ATCCCAAGAAATGCTTTTTCGTGGAACCCTATGA
Protein sequenceShow/hide protein sequence
MKQMVKQMASALRGMVKRKARALKARLIIYSLLAQSNFFVSSIPLTTLSTHHHQQHSQLQPLQDQVTETEQETGVCQEYEPETEPAPEPEAEAEAESSGSVIEMVKHSKE
KAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSQEMLFRGTL