; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLipid transfer-like protein
Genome locationchr05:5462494..5464494
RNA-Seq ExpressionLsi05G004300
SyntenyLsi05G004300
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048555.1 lipid transfer-like protein VAS [Cucumis melo var. makuwa]3.4e-4672.59Show/hide
Query:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        M++   AA VV+++LGCG ++G +AQN+ TSCVN L+PCLNY+NGT +PP+SCC+PL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL ANN +GL S+S TLQVITLAI T L++
Subjt:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

KAG6581146.1 Lipid transfer-like protein VAS, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3762.22Show/hide
Query:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        ME +    ++  ++L   + M    + QDTSC+NRLIPCLNYLNGT +PP SCCNPLKS+IDSNP+CLC+LISR+GS+RAE AGID++QAQLLP RCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL  ANNA   S+SSTLQ+I+L     L++
Subjt:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI

XP_004145619.1 lipid transfer-like protein VAS [Cucumis sativus]2.4e-4774.44Show/hide
Query:  RRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN
        ++ +AA VV+++LGCG ++G +AQ++DTSCVN LIPCLNY+NGT +PP+SCCNPL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEHVN
Subjt:  RRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN

Query:  PLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        PLSCL ANN +G PSMS  LQVITLAI T L++
Subjt:  PLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

XP_008449981.1 PREDICTED: lipid transfer-like protein VAS [Cucumis melo]3.4e-4672.59Show/hide
Query:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        M++   AA VV+++LGCG ++G +AQN+ TSCVN L+PCLNY+NGT +PP+SCC+PL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL ANN +GL S+S TLQVITLAI T L++
Subjt:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

XP_038901700.1 non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida]4.7e-5687.88Show/hide
Query:  RRAMAAMVVLL-VLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN
        R AMA M+VLL V+GC ATMG+AQNQDTSCVNRLIPCLNYLNGTG+PP+SCCNPL+SIIDSNP+CLC LISREGSNRAEAAGIDINQAQLLPARCGEHVN
Subjt:  RRAMAAMVVLL-VLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN

Query:  PLSCLTANNAGLPSMSSTLQVITLAIPTMLMI
        PLSCLTANNAGLPSMSSTLQVITLA  TML++
Subjt:  PLSCLTANNAGLPSMSSTLQVITLAIPTMLMI

TrEMBL top hitse value%identityAlignment
A0A0A0L9L7 AAI domain-containing protein1.1e-4774.44Show/hide
Query:  RRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN
        ++ +AA VV+++LGCG ++G +AQ++DTSCVN LIPCLNY+NGT +PP+SCCNPL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEHVN
Subjt:  RRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVN

Query:  PLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        PLSCL ANN +G PSMS  LQVITLAI T L++
Subjt:  PLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

A0A1S3BMN1 lipid transfer-like protein VAS1.7e-4672.59Show/hide
Query:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        M++   AA VV+++LGCG ++G +AQN+ TSCVN L+PCLNY+NGT +PP+SCC+PL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL ANN +GL S+S TLQVITLAI T L++
Subjt:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

A0A5A7U4K4 Lipid transfer-like protein VAS1.7e-4672.59Show/hide
Query:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        M++   AA VV+++LGCG ++G +AQN+ TSCVN L+PCLNY+NGT +PP+SCC+PL+SII+SNPECLC LISREGSNRAEAAGIDIN+AQLLPARCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMG-IAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL ANN +GL S+S TLQVITLAI T L++
Subjt:  VNPLSCLTANN-AGLPSMSSTLQVITLAIPTMLMI

A0A6J1F9V7 lipid transfer-like protein VAS1.8e-3762.22Show/hide
Query:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        ME +     +  ++L   + M    + QDTSC+NRLIPCLNYLNGT +PP SCCNPLKS+IDSNP+CLC+LISR+GS+RAE AGID++QAQLLP RCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL  ANNA   S+SSTLQ+I+L     L++
Subjt:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI

A0A6J1J1M2 lipid transfer-like protein VAS3.1e-3762.22Show/hide
Query:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH
        ME +     +  ++L   + M   A+ QDTSC+NRLIPCLNYLNGT +PP SCCNPLKS+IDSNP+CLC+LISR+GS+RAE AGID++QAQLLP RCGEH
Subjt:  MERRAMAAMVVLLVLGCGATMGI-AQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEH

Query:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI
        VNPLSCL  ANNA   S+SS LQ+I+L     L++
Subjt:  VNPLSCL-TANNAGLPSMSSTLQVITLAIPTMLMI

SwissProt top hitse value%identityAlignment
F4HZB9 Non-specific lipid transfer protein GPI-anchored 193.8e-0837.27Show/hide
Query:  AMAAMVVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQ--AQLLPARCG-EHV
        A+ A+V+   L  GAT   A  +DT  +  L PCL YLNG  + P  SCC    +++ S+PECLCS+++   SN +   G   N+  A  LP  C  +  
Subjt:  AMAAMVVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQ--AQLLPARCG-EHV

Query:  NPLSCLTANN
        +P  C T  N
Subjt:  NPLSCLTANN

Q1PFD8 Non-specific lipid transfer protein GPI-anchored 92.5e-0735.24Show/hide
Query:  MERRAMAAMVVLLVL--GCGATMGIAQNQDTSCVNRLIPCLNYLNGTG-NPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCG
        ME     A+VV +V+     AT      Q T+C+ +L+PC  Y++     PP SCC P+K I++ +  CLC  I+       +A  +    A LLP  CG
Subjt:  MERRAMAAMVVLLVL--GCGATMGIAQNQDTSCVNRLIPCLNYLNGTG-NPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCG

Query:  EHVNP
          VNP
Subjt:  EHVNP

Q7EB72 Non-specific lipid transfer protein GPI-anchored 151.6e-0634.65Show/hide
Query:  RRAMAAMVVLLVLGCGATMGIAQNQ-DTSCVNRLI---PCLNYLNGTGNPPDS-CCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDIN--QAQLLPAR
        RR+ A   V LV    A   + + Q  +SCV+ L    PCL+Y+ G    P   CC+ L S+I S+P+C+CS ++    N     G++IN  QA  LP  
Subjt:  RRAMAAMVVLLVLGCGATMGIAQNQ-DTSCVNRLI---PCLNYLNGTGNPPDS-CCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDIN--QAQLLPAR

Query:  CGEHVNPL---SCLTANNAGLPSMSST
        C     PL   +  T   A  P+ S T
Subjt:  CGEHVNPL---SCLTANNAGLPSMSST

Q9FFY3 Non-specific lipid transfer protein GPI-anchored 307.2e-3160.19Show/hide
Query:  VVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTAN
        VVLL++   + M I   Q  SC+N+L PCLNYLNGT   P  CCNPLKS+I +NPECLC +IS   S++AE AGID+N AQ+LPARCGEHVNP++CLT +
Subjt:  VVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTAN

Query:  NAG
          G
Subjt:  NAG

Q9LJ86 Non-specific lipid transfer protein GPI-anchored 52.4e-1036.73Show/hide
Query:  ATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQL--LPARCGEHVNPLS-CLTANNAG
        +TM  AQ+  T+ +  + PCLNY+ G    P+  CCN L  ++ S+P+CLC +++  GS      GI++NQ Q   LP  C     P+S C T    G
Subjt:  ATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQL--LPARCGEHVNPLS-CLTANNAG

Arabidopsis top hitse value%identityAlignment
AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.7e-0937.27Show/hide
Query:  AMAAMVVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQ--AQLLPARCG-EHV
        A+ A+V+   L  GAT   A  +DT  +  L PCL YLNG  + P  SCC    +++ S+PECLCS+++   SN +   G   N+  A  LP  C  +  
Subjt:  AMAAMVVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQ--AQLLPARCG-EHV

Query:  NPLSCLTANN
        +P  C T  N
Subjt:  NPLSCLTANN

AT1G70250.1 receptor serine/threonine kinase, putative5.1e-0832.47Show/hide
Query:  TSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSC
        T CV++++PC  +LN T  P   CCN +K  ++ +  CLC++ +  G        I  +QA  L  RCG + +  +C
Subjt:  TSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSC

AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.8e-0835.24Show/hide
Query:  MERRAMAAMVVLLVL--GCGATMGIAQNQDTSCVNRLIPCLNYLNGTG-NPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCG
        ME     A+VV +V+     AT      Q T+C+ +L+PC  Y++     PP SCC P+K I++ +  CLC  I+       +A  +    A LLP  CG
Subjt:  MERRAMAAMVVLLVL--GCGATMGIAQNQDTSCVNRLIPCLNYLNGTG-NPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCG

Query:  EHVNP
          VNP
Subjt:  EHVNP

AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.7e-1136.73Show/hide
Query:  ATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQL--LPARCGEHVNPLS-CLTANNAG
        +TM  AQ+  T+ +  + PCLNY+ G    P+  CCN L  ++ S+P+CLC +++  GS      GI++NQ Q   LP  C     P+S C T    G
Subjt:  ATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPD-SCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQL--LPARCGEHVNPLS-CLTANNAG

AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.1e-3260.19Show/hide
Query:  VVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTAN
        VVLL++   + M I   Q  SC+N+L PCLNYLNGT   P  CCNPLKS+I +NPECLC +IS   S++AE AGID+N AQ+LPARCGEHVNP++CLT +
Subjt:  VVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTAN

Query:  NAG
          G
Subjt:  NAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAAGAGCGATGGCAGCAATGGTAGTATTACTGGTACTAGGTTGCGGCGCAACCATGGGAATCGCTCAAAATCAAGACACATCGTGTGTGAATAGGTTAATTCC
ATGCTTAAATTACCTAAACGGAACTGGAAATCCGCCGGATAGTTGCTGTAATCCTCTGAAATCGATCATCGATTCCAATCCCGAATGCCTTTGCAGTTTAATTAGCAGAG
AAGGAAGTAATCGAGCAGAGGCAGCCGGCATCGATATCAATCAGGCTCAACTCTTGCCCGCTCGATGTGGAGAACATGTCAATCCTCTCTCTTGCCTCACCGCCAATAAT
GCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTAATTACACTCGCGATTCCCACAATGCTTATGATCTTATGA
mRNA sequenceShow/hide mRNA sequence
CTTCAACTTCCAACTATATATATATGTGTGTGTGTGTGTAAATTCATAAACAAACACAGAGCGCAGATCAAATAATTAGTTAAGAGAGAAATCAAATGGAAAGAAGAGCG
ATGGCAGCAATGGTAGTATTACTGGTACTAGGTTGCGGCGCAACCATGGGAATCGCTCAAAATCAAGACACATCGTGTGTGAATAGGTTAATTCCATGCTTAAATTACCT
AAACGGAACTGGAAATCCGCCGGATAGTTGCTGTAATCCTCTGAAATCGATCATCGATTCCAATCCCGAATGCCTTTGCAGTTTAATTAGCAGAGAAGGAAGTAATCGAG
CAGAGGCAGCCGGCATCGATATCAATCAGGCTCAACTCTTGCCCGCTCGATGTGGAGAACATGTCAATCCTCTCTCTTGCCTCACCGCCAATAATGCTGGGTTGCCCTCC
ATGTCTTCCACTCTACAAGTAATTACACTCGCGATTCCCACAATGCTTATGATCTTATGA
Protein sequenceShow/hide protein sequence
MERRAMAAMVVLLVLGCGATMGIAQNQDTSCVNRLIPCLNYLNGTGNPPDSCCNPLKSIIDSNPECLCSLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTANN
AGLPSMSSTLQVITLAIPTMLMIL