CuGenDBv2

Gene ID	Lsi05G004400
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF3754)
Genome location	chr05:5637293..5638466
RNA-Seq Expression	Lsi05G004400
Synteny	Lsi05G004400
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022148089.1 uncharacterized protein LOC111016855 isoform X1 [Momordica charantia]

1.2e-52

77.85

Show/hide

Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

XP_022148090.1 uncharacterized protein LOC111016855 isoform X2 [Momordica charantia]

1.2e-52

77.85

Show/hide

Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

XP_022148091.1 uncharacterized protein LOC111016855 isoform X3 [Momordica charantia]

1.2e-52

77.85

Show/hide

Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

XP_022983456.1 uncharacterized protein LOC111482053 [Cucurbita maxima]

4.3e-53

79.17

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Query:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD
        G+LVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQG+ATKQELDMRCEELIQ QFDQSCNF+VDD
Subjt:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD

Query:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE
        A+HKLEKLGI++R ADG YSCVDLRSAN IIGITTEEIV+KAKE
Subjt:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE

XP_038892952.1 uncharacterized protein LOC120081846 [Benincasa hispida]

1.4e-56

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Query:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD
        G+LVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQG+ATKQELD+RCEELI+ +FDQSCNFDVDD
Subjt:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD

Query:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        A+HKL+KLGI+VRGADG YSCVDLRSANKIIGITTEEIVSKAKE DASTT
Subjt:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D1Z1 uncharacterized protein LOC111016855 isoform X2

6.0e-53

77.85

Show/hide

Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

A0A6J1D2Z1 uncharacterized protein LOC111016855 isoform X1

6.0e-53

77.85

Show/hide

Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

A0A6J1D4B7 uncharacterized protein LOC111016855 isoform X3

6.0e-53

77.85

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Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        +LVSYQ+LIT CVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQGKAT QELD RCEELIQ QF QSCNFDVDDA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT
        +HKLEKLGIVVR ADG YSCVDLRSANKIIG TTEEI+SKAKE+DAS T
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

A0A6J1F2F4 uncharacterized protein LOC111441529

1.0e-52

78.47

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Query:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD
        G+LVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQG+ATKQELD RCEELIQ QFDQSCNF+VDD
Subjt:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD

Query:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE
        A+HKLEKLGI++R ADG YSCVDLRSAN IIGITTEEIV+KAKE
Subjt:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE

A0A6J1J295 uncharacterized protein LOC111482053

2.1e-53

79.17

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Query:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD
        G+LVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISFYILMKQG+ATKQELDMRCEELIQ QFDQSCNF+VDD
Subjt:  GSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDD

Query:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE
        A+HKLEKLGI++R ADG YSCVDLRSAN IIGITTEEIV+KAKE
Subjt:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G19340.1 Protein of unknown function (DUF3754)

1.5e-40

58.74

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Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA
        ++ +YQ+LIT  +YDKQLDSGRGTLLHLCD+VIQQE                   VKEV+I FYILM+QGKAT ++LD+RCEELI+ +F   CNFDV+DA
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDA

Query:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE
        + KLEKLGIV R   G Y C+ L+ AN+IIG TTEE+V KAK+
Subjt:  IHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE

AT5G13940.1 aminopeptidases

1.9e-38

58.33

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Query:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKAT-KQELDMRCEELIQRQFDQSCNFDVDD
        +LV YQSLIT  VYDKQLDSGRGTLLHLCDEVIQQE                   VKEVIISF++L+K+G  T K+ELDM+ E  I+ +F++SCNFDVDD
Subjt:  SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKAT-KQELDMRCEELIQRQFDQSCNFDVDD

Query:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE
        AI KLEKLG+V R ++  Y CV+++ AN+I+G TTEE+V KA++
Subjt:  AIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKE

Sequences

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CDS sequence

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ATGGGTGGTAGTTTAGTGTCATATCAGAGCCTAATCACAAGCTGCGTGTATGACAAACAACTAGACAGTGGAAGGGGCACTCTTCTTCACTTGTGTGACGAAGTTATTCA
GCAAGAACTCCTAGTGGAGGAAGATATCTTTCATCTAGTCCTCATTCTGAATGCTATTTTTGGTGTAAAGGAGGTGATTATTTCCTTCTATATATTGATGAAACAGGGAA
AGGCGACGAAACAGGAGCTTGACATGCGGTGTGAGGAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAATTTTGACGTGGATGATGCAATTCACAAGTTAGAGAAGTTG
GGGATCGTTGTCCGGGGTGCGGATGGGTTATATTCCTGTGTAGATTTGAGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTTTCCAAAGCAAAAGAAAG
CGATGCCTCCACTACTTGA

mRNA sequence

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Protein sequence

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MGGSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKL
GIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

Lsi05G004400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome