; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhistone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
Genome locationchr05:5702428..5706863
RNA-Seq ExpressionLsi05G004430
SyntenyLsi05G004430
Gene Ontology termsGO:0034968 - histone lysine methylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
InterPro domainsIPR001214 - SET domain
IPR003616 - Post-SET domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022620.1 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6095.73Show/hide
Query:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI
        +RRSRDASLPANNS+DGIDD+RSESVPEFC+DACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYG DGKI
Subjt:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI

Query:  KQMPCFCGATECRKRLF
        KQMPCFCGATECRKRLF
Subjt:  KQMPCFCGATECRKRLF

XP_008449992.1 PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis melo]6.1e-6198.28Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RRSRDASLPANNSLD +DDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        QMPCFCGATECRKRLF
Subjt:  QMPCFCGATECRKRLF

XP_011651591.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis sativus]1.0e-6098.28Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RRSRDASLPANNSLD IDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLS+HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        QMPCFCGATECRKRLF
Subjt:  QMPCFCGATECRKRLF

XP_022928431.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X2 [Cucurbita moschata]2.3e-6095.73Show/hide
Query:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI
        +RRSRDASLPANNS+DGIDD+RSESVPEFC+DACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYG DGKI
Subjt:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI

Query:  KQMPCFCGATECRKRLF
        KQMPCFCGATECRKRLF
Subjt:  KQMPCFCGATECRKRLF

XP_022928432.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X3 [Cucurbita moschata]2.3e-6095.73Show/hide
Query:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI
        +RRSRDASLPANNS+DGIDD+RSESVPEFC+DACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYG DGKI
Subjt:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI

Query:  KQMPCFCGATECRKRLF
        KQMPCFCGATECRKRLF
Subjt:  KQMPCFCGATECRKRLF

TrEMBL top hitse value%identityAlignment
A0A0A0LC23 Uncharacterized protein2.9e-6196.61Show/hide
Query:  ALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGK
        ++RRSRDASLPANNSLD IDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLS+HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGK
Subjt:  ALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGK

Query:  IKQMPCFCGATECRKRLF
        IKQMPCFCGATECRKRLF
Subjt:  IKQMPCFCGATECRKRLF

A0A1S3BN95 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH42.9e-6198.28Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RRSRDASLPANNSLD +DDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        QMPCFCGATECRKRLF
Subjt:  QMPCFCGATECRKRLF

A0A6J1D214 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X11.1e-6096.55Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RRS+DASLPANNSLDGIDD+RSESVPEFCIDAC TGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGK+K
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        QMPCFCGATECRKRLF
Subjt:  QMPCFCGATECRKRLF

A0A6J1D471 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X21.1e-6096.55Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RRS+DASLPANNSLDGIDD+RSESVPEFCIDAC TGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGK+K
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        QMPCFCGATECRKRLF
Subjt:  QMPCFCGATECRKRLF

A0A6J1EP01 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X11.1e-6095.73Show/hide
Query:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI
        +RRSRDASLPANNS+DGIDD+RSESVPEFC+DACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYG DGKI
Subjt:  LRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI

Query:  KQMPCFCGATECRKRLF
        KQMPCFCGATECRKRLF
Subjt:  KQMPCFCGATECRKRLF

SwissProt top hitse value%identityAlignment
O82175 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH53.3e-2553.93Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
        F I+A   GNI RFINHSC PNL+ Q VL  H +I++  ++ FA +NIPPLQEL+YDY Y +D VY  +G IK+  C+CG+ EC  RL+
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

Q08BR4 Histone-lysine N-methyltransferase SETDB1-B1.2e-1647.73Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRL
        + IDA   GN+ R++NHSC PNLFVQ V    HD++   V  FA++ I    ELT+DY Y + SV G     K++ C CG+TECR RL
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRL

Q6INA9 Histone-lysine N-methyltransferase SETDB11.6e-1647.73Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRL
        + IDA   GN+ R++NHSC PNLFVQ V    HD++   V  FA++ I    ELT+DY Y + SV G     K++ C CG+TECR RL
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRL

Q8GZB6 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH49.8e-4672.41Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RR RD ++P NN +        E+ PEFCIDA STGN ARFINHSCEPNLFVQCVLSSH DI+LARVVLFAA+NI P+QELTYDYGYALDSV+GPDGK+K
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        Q+ C+CGA  CRKRL+
Subjt:  QMPCFCGATECRKRLF

Q8VZ17 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH64.1e-2861.8Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
        F IDA S GN+ RFINHSC PNL+ Q VL  H D ++  V+ FA +NIPPLQEL YDY YALD V    G IKQ PCFCGA  CR+RL+
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

Arabidopsis top hitse value%identityAlignment
AT1G73100.1 SU(VAR)3-9 homolog 34.1e-1538.46Show/hide
Query:  IDDRRSESVPE-------FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK-QMPCFCGA
        +D+  S  VPE         I A   GN+ARF+NHSC PN+F Q V+   +   +  +  FA  +IPP+ ELTYDYG +  S    +  +  Q  C CG+
Subjt:  IDDRRSESVPE-------FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK-QMPCFCGA

Query:  TECR
         +CR
Subjt:  TECR

AT2G22740.1 SU(VAR)3-9 homolog 62.9e-2961.8Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
        F IDA S GN+ RFINHSC PNL+ Q VL  H D ++  V+ FA +NIPPLQEL YDY YALD V    G IKQ PCFCGA  CR+RL+
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

AT2G22740.2 SU(VAR)3-9 homolog 62.9e-2961.8Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
        F IDA S GN+ RFINHSC PNL+ Q VL  H D ++  V+ FA +NIPPLQEL YDY YALD V    G IKQ PCFCGA  CR+RL+
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

AT2G35160.1 SU(VAR)3-9 homolog 52.3e-2653.93Show/hide
Query:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
        F I+A   GNI RFINHSC PNL+ Q VL  H +I++  ++ FA +NIPPLQEL+YDY Y +D VY  +G IK+  C+CG+ EC  RL+
Subjt:  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

AT5G13960.1 SU(VAR)3-9 homolog 46.9e-4772.41Show/hide
Query:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK
        RR RD ++P NN +        E+ PEFCIDA STGN ARFINHSCEPNLFVQCVLSSH DI+LARVVLFAA+NI P+QELTYDYGYALDSV+GPDGK+K
Subjt:  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIK

Query:  QMPCFCGATECRKRLF
        Q+ C+CGA  CRKRL+
Subjt:  QMPCFCGATECRKRLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTGCTGTTGAAAACTTGTTTGGCCTTGAGGCGCTCAAGAGATGCATCCTTGCCAGCAAACAATTCTTTGGATGGTATAGATGATCGAAGATCTGAAAGTGTGCC
AGAGTTCTGCATTGATGCTTGTTCCACTGGAAATATTGCAAGGTTTATCAATCATAGTTGTGAACCTAATCTTTTTGTCCAATGTGTATTGAGCTCACACCATGACATCA
AACTTGCTCGAGTGGTACTATTTGCTGCAGAAAACATACCACCCCTCCAGGAACTGACATACGACTATGGCTATGCACTTGATAGCGTGTATGGTCCAGATGGGAAGATA
AAACAGATGCCCTGCTTCTGTGGTGCAACTGAGTGTAGGAAGCGGTTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTGCTGTTGAAAACTTGTTTGGCCTTGAGGCGCTCAAGAGATGCATCCTTGCCAGCAAACAATTCTTTGGATGGTATAGATGATCGAAGATCTGAAAGTGTGCC
AGAGTTCTGCATTGATGCTTGTTCCACTGGAAATATTGCAAGGTTTATCAATCATAGTTGTGAACCTAATCTTTTTGTCCAATGTGTATTGAGCTCACACCATGACATCA
AACTTGCTCGAGTGGTACTATTTGCTGCAGAAAACATACCACCCCTCCAGGAACTGACATACGACTATGGCTATGCACTTGATAGCGTGTATGGTCCAGATGGGAAGATA
AAACAGATGCCCTGCTTCTGTGGTGCAACTGAGTGTAGGAAGCGGTTGTTTTAGTCTAGGGAAAGCCTTCAGCTGCTGTTCCATCACCAAACTCACCATGTTCGCATTTG
TTCTCCCGTTTCTAGGTGGACTGAGATGTTTCTGATGCGAAATTGCTATTCTATCTCACCACCTTGAATACAGAGAATGAGAAGATGGCTTTCTTTAGTTTCTAGAATTG
TAGTTACTAGAAAGAAAAGGAAAATACAAGATCATAGAGAAGGAATTGGAATCCAAGGGGCCAGTCAACAAACAAGCTACTTTGTTCAGTGAATTGACAGCCACAAAAGG
TATATGCTTCAGAAAGATTATTCGATTAAATGATGGCCTCATATTTTCAAGGTTAATGATGAAATGTCATTTTGTTAATACTGACCAACTGAAATTTGGAAAAAATAACT
AGAATCAAAGTGAGTTGAACCTGGCGAACCAATAATATACAAATATACACCTTTAATATGACTCTTCAATGACATTAGTTAACACTAAACTATTTAA
Protein sequenceShow/hide protein sequence
MLLLLKTCLALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKI
KQMPCFCGATECRKRLF