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Lsi05G004590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCysteine-rich and transmembrane domain-containing protein A-like
Genome locationchr05:5875462..5878325
RNA-Seq ExpressionLsi05G004590
SyntenyLsi05G004590
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066894.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]6.3e-3996.39Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
        MSYSYGY+HPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHGW
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
KAG7022631.1 hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3672.95Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-----PPPPPPPPYHQQHYHYDDRNDCSSFLHGW----YLSYTLLLL
        MSY Y +HH PPETYPPPGYPPPQPGYPG+   PPPPHQGYQ YFYDGYQPSA     PP PPPPPYH QHYHYDDR++CSSFL GW      SYT+LLL
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-----PPPPPPPPYHQQHYHYDDRNDCSSFLHGW----YLSYTLLLL

Query:  YVGGVLGLLPIDGCKIGVLFSV
        YVGGVLGL PID  K  VLF +
Subjt:  YVGGVLGLLPIDGCKIGVLFSV
TYK27230.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]4.1e-3895.18Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
        MSYSYGY++PPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHGW
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
XP_008450006.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]9.2e-3896.34Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
        MSYSYGY+HPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHG
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
XP_038879833.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]1.8e-3896.3Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPYHQQHYHYDDRNDCSSFLHG
        MSY YGYH PPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPYH QHYHYDDRNDCSSFLHG
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPYHQQHYHYDDRNDCSSFLHG
TrEMBL top hitse value%identityAlignment
A0A0A0L8F9 Uncharacterized protein2.3e-3491.57Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQP-PPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
        MSY YGY+HPPPETYPPPGYPPPQPGYPG+QP PPPPPHQGYQGYFYDGYQPSA PPPPPPPP H QHYHYDDRNDCSSFLHG
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQP-PPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
A0A1S3BP97 cysteine-rich and transmembrane domain-containing protein A-like4.4e-3896.34Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
        MSYSYGY+HPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHG
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHG
A0A5A7VHS2 Cysteine-rich and transmembrane domain-containing protein A-like3.1e-3996.39Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
        MSYSYGY+HPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHGW
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
A0A5D3DVB2 Cysteine-rich and transmembrane domain-containing protein A-like2.0e-3895.18Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
        MSYSYGY++PPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA PPPPPPPPYH QHYHYDDRNDCSSFLHGW
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSA-PPPPPPPPYHQQHYHYDDRNDCSSFLHGW
A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like1.6e-3284.88Show/hide
Query:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPP-----PPPPPYHQQHYHYDDRNDCSSFLHG
        M+Y YGY HPPPETYPPPGY PPQPGYPGHQP PPPPHQGYQGYFYDGY PSAPPP     PPPPPY  QHYHYDDRNDCSSFLHG
Subjt:  MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPP-----PPPPPYHQQHYHYDDRNDCSSFLHG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein1.2e-0648.84Show/hide
Query:  PPPETYPPP-----GYPPPQPGYPGHQPPPPPPHQ-GYQGYFYDG---YQPSAPPPPPPPP----YHQQHYHYDDRND-CSSFLHG
        PPP  YP P     GYPPPQP Y G+ PP   P++ GYQGYF  G   +Q   PPPPPPP      H  H+HY D +  C SF+ G
Subjt:  PPPETYPPP-----GYPPPQPGYPGHQPPPPPPHQ-GYQGYFYDG---YQPSAPPPPPPPP----YHQQHYHYDDRND-CSSFLHG
AT1G12810.2 proline-rich family protein1.2e-0648.84Show/hide
Query:  PPPETYPPP-----GYPPPQPGYPGHQPPPPPPHQ-GYQGYFYDG---YQPSAPPPPPPPP----YHQQHYHYDDRND-CSSFLHG
        PPP  YP P     GYPPPQP Y G+ PP   P++ GYQGYF  G   +Q   PPPPPPP      H  H+HY D +  C SF+ G
Subjt:  PPPETYPPP-----GYPPPQPGYPGHQPPPPPPHQ-GYQGYFYDG---YQPSAPPPPPPPP----YHQQHYHYDDRND-CSSFLHG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTCTTACGGCTACCACCATCCTCCGCCGGAAACCTACCCTCCTCCCGGTTACCCTCCACCGCAGCCTGGATATCCCGGCCATCAGCCACCGCCACCGCCGCC
GCACCAAGGTTATCAAGGGTATTTCTATGATGGGTATCAGCCATCGGCGCCGCCGCCTCCTCCTCCACCGCCTTATCATCAGCAGCACTATCACTACGATGATCGAAATG
ATTGTTCCTCCTTCCTTCATGGATGGTACCTTAGCTACACTTTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGCTTCCGATAGACGGTTGCAAAATTGGTGTTCTT
TTTTCAGTCTGTTTGGCTGTGCTGTGTTCATGTCTTCCATTGTGCTGTGTTCATGTCTTCTATTATGAATCGACGCCTGTTTTCGCATCATTTGGAACAAGATTTGTAGT
TTCTGGTTTGGGTGACTGTAAACTATCTGTATTGTTTGATATCTAA
mRNA sequenceShow/hide mRNA sequence
TAAATATCAAAAGTTATAAATGCTTACAACAACTAGAACACAGGGGACATACCCACCACGTTAAGCAATTTGCTTCTCATTTTTATCTTCTTCCTCCTCATCATCTCCAA
ATTTCTCCATTTCCATTTCCATTCTCAAAGAATTATGAGTTACTCTTACGGCTACCACCATCCTCCGCCGGAAACCTACCCTCCTCCCGGTTACCCTCCACCGCAGCCTG
GATATCCCGGCCATCAGCCACCGCCACCGCCGCCGCACCAAGGTTATCAAGGGTATTTCTATGATGGGTATCAGCCATCGGCGCCGCCGCCTCCTCCTCCACCGCCTTAT
CATCAGCAGCACTATCACTACGATGATCGAAATGATTGTTCCTCCTTCCTTCATGGATGGTACCTTAGCTACACTTTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCT
GCTTCCGATAGACGGTTGCAAAATTGGTGTTCTTTTTTCAGTCTGTTTGGCTGTGCTGTGTTCATGTCTTCCATTGTGCTGTGTTCATGTCTTCTATTATGAATCGACGC
CTGTTTTCGCATCATTTGGAACAAGATTTGTAGTTTCTGGTTTGGGTGACTGTAAACTATCTGTATTGTTTGATATCTAAACGCTCATATTTACTTTTATAAATACCTAA
ACAAATAATAGTTAATACTAGTAGACTTGGAATCCCTATTGTTGTCATCCAGATCAACTTCTTTTAGATTTTGCTGCCTAGTTTCTGTGGAGCCTTGATATAGAAAGAAG
AATATGCTATTTGAAACTTGGTTTAATCCTTCATTTAGTATCCAAACATTTTGATTTTGTGAGTGGCAAACTGATGCTGGCCCCACTTTCGTTTCGCAAAAGTGATTTTT
TTTTTTTTTAATTTAAAATAATAATAATAACTTTGACCGTTTGATCATGAATCTAAAACATCTGAATAACTTTCTTTCCAGAAAAGGTTGGAAATATGAGCAATCAGGCA
CTTTTTGATACTGGAAGCAATAAGTTAAG
Protein sequenceShow/hide protein sequence
MSYSYGYHHPPPETYPPPGYPPPQPGYPGHQPPPPPPHQGYQGYFYDGYQPSAPPPPPPPPYHQQHYHYDDRNDCSSFLHGWYLSYTLLLLYVGGVLGLLPIDGCKIGVL
FSVCLAVLCSCLPLCCVHVFYYESTPVFASFGTRFVVSGLGDCKLSVLFDI