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Lsi05G004750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr05:6072441..6074162
RNA-Seq ExpressionLsi05G004750
SyntenyLsi05G004750
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066959.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]2.0e-2595.31Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        +SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM

KAG7017799.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2688.24Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVKKMV
        + D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNN SRPEENYQYSPMV  ++
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVKKMV

KAG7022694.1 hypothetical protein SDJN02_16428, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3375.24Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM---------------VKKMVLLFLKLLGSDGGGDNRHG
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAKNN   PEENYQYSPM                +KMVLL LKL+GSDGGGDNRHG
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM---------------VKKMVLLFLKLLGSDGGGDNRHG

Query:  ERRLK
        ERR+K
Subjt:  ERRLK

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]2.4e-2696.88Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNNTSRPEENYQYSPM K
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]2.4e-2696.88Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNNTSRPEENYQYSPM K
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein3.7e-2592.31Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM K
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVK

A0A5D3E371 RPM1-interacting protein 4-like9.8e-2695.31Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        +SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM

A0A5J5AK52 AvrRpt-cleavage domain-containing protein8.9e-1971.62Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAKN-NTSRPEENYQYSPMVKKMVLLF
        SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A  PG  + KN NTS+  ENYQY PM KK    F
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAKN-NTSRPEENYQYSPMVKKMVLLF

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein7.5e-1864.56Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKNNTSRPEENYQYSPMVKKMVLLF
        +SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    KN+ S+  ENYQYSPM KK    F
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKNNTSRPEENYQYSPMVKKMVLLF

B9SLS6 NOI, putative3.7e-1769.33Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNTSRPEENYQYSPMVKKMVLLF
        ++QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G  AA    NN  +P++NYQ  P  KK    F
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNTSRPEENYQYSPMVKKMVLLF

SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.4e-1383.33Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

Q8GYN5 RPM1-interacting protein 45.4e-0540.28Show/hide
Query:  PFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NEAPGNTAAKNNTSRPEEN
        P  +N R D+   S +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S  N +  +    + +SR   N
Subjt:  PFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NEAPGNTAAKNNTSRPEEN

Arabidopsis top hitse value%identityAlignment
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein7.2e-1362.3Show/hide
Query:  HENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---NNTSRPE
        ++  Q + RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N A G  A++   NN S+ E
Subjt:  HENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---NNTSRPE

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1458.57Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNTSRPEENYQYSPMVKKMVLL
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      VKKM LL
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNTSRPEENYQYSPMVKKMVLL

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.0e-1457.75Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNTSRPEENYQYSPMVKKMVLL
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      VKKM LL
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKNNTSRPEENYQYSPMVKKMVLL

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.3e-1481.4Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1466.67Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEEN
        +++KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A G  A  N+   P+ N
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAAATGCATGGCCAGAAGCAAATACAAGATAGGCAGAGATCTACACATAAACAAGGAACATTCAAAGTTCCCTTTTAAAAGCAATGGAAGAACTGACAAACA
TGAGAATTCACAAGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATG
AGAAGAAGTCAAATGAGGCTCCTGGGAACACAGCAGCCAAAAACAATACATCCAGACCAGAGGAGAATTATCAATATTCTCCCATGGTAAAAAAAATGGTTTTGCTGTTT
CTGAAACTACTAGGGAGTGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTGAAGAAAAGATTTATGAGTGAGAAGCAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATAAAGATAGAATTGAGGGAGTGATGTAAGAGAACTTGAGAAACGGCCTTAAAATGGAGTTACCAAAATACTCGGTTTCTGTTATTCCCATTTTAGCTTCCAACACCCCA
TTCTCCCTCTTTCCTTCCCTCTTCCTTCTCTCTTTCTCTCTCTCTCTCTCTCACTTTCATTTTCTGTGCAGAAAGCTTTGTTAATGTATTTTAATGGCTTCGAAATGCAT
GGCCAGAAGCAAATACAAGATAGGCAGAGATCTACACATAAACAAGGAACATTCAAAGTTCCCTTTTAAAAGCAATGGAAGAACTGACAAACATGAGAATTCACAAGATA
AAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAACCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAG
GCTCCTGGGAACACAGCAGCCAAAAACAATACATCCAGACCAGAGGAGAATTATCAATATTCTCCCATGGTAAAAAAAATGGTTTTGCTGTTTCTGAAACTACTAGGGAG
TGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTGAAGAAAAGATTTATGAGTGAGAAGCAGAATTAAGTAGGGATGTGATGGTTTATTTTCTCTCTCTCTCTCT
TCCTCTCTCTCTCTGTACCTCTTACTATATATGCAAAATATAGAATACAAAAATTTTCATGACATGCATATAGAAGTTGAGCGGTGGTTATAGCTCCCTGTAAGTTTCGC
TCTAATAGAAACTTTTTGCTTCTTTCAGTTTCTTCTTCTCAATGTCACTGATATTGTTGTTTGCAACTTAACCATTCAAAAGATTTCTGAACCAACACACTTCGTTTTTC
TAAAGTAATTGCACATGTTATATGATGAAAAGAAACCAAACCACG
Protein sequenceShow/hide protein sequence
MASKCMARSKYKIGRDLHINKEHSKFPFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMVKKMVLLF
LKLLGSDGGGDNRHGERRLKKRFMSEKQN