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Lsi05G004790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionclass I heat shock protein-like
Genome locationchr05:6095752..6096847
RNA-Seq ExpressionLsi05G004790
SyntenyLsi05G004790
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066962.1 class I heat shock protein-like [Cucumis melo var. makuwa]2.4e-4977.3Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR
        MSLILNE+FDPFLSMINQCPVLNTP DWKETPAAHVFIADLPGLKK+               QISGDR  DA  AND+NDESSGHKWRRVERCR KFCRR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR

Query:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE
        FRLP N+KA +V A MENGVL VTVPKE VKKPEKKVIEIE
Subjt:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE

XP_004145723.1 class I heat shock protein [Cucumis sativus]2.4e-4975Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDE--NDESSGHKWRRVERCREKFCR
        MSLIL+E+FDPFLSMINQCPVLNTP DWKETPAAH+FIADLPGLKK+               QISGDR D  TA ++  NDESSGHKWRRVERCR KFCR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDE--NDESSGHKWRRVERCREKFCR

Query:  RFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV
        RFRLP N+KA +VRA MENGVL VTVPKEEVKKPEKKVIEIET+
Subjt:  RFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV

XP_008450042.1 PREDICTED: class I heat shock protein-like [Cucumis melo]3.7e-5078.01Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR
        MSLILNE+FDPFLSMINQCPVLNTP DWKETPAAHVFIADLPGLKK+               QISGDR  DA  AND+NDESSGHKWRRVERCR KFCRR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR

Query:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE
        FRLP N+KA +V A MENGVL VTVPKEEVKKPEKKVIEIE
Subjt:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE

XP_022154167.1 18.1 kDa class I heat shock protein-like [Momordica charantia]6.5e-3960.38Show/hide
Query:  MSLILN-----ELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQI---------------------------SGDRADAITANDENDESSG
        MS ILN     EL DPFLS+INQCPVLNTP DWKETPAAHV IADLPGL K+Q+                            GDRA   +  DENDESSG
Subjt:  MSLILN-----ELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQI---------------------------SGDRADAITANDENDESSG

Query:  HKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV
        +KW R+ERCR KFCRRFRLPEN K  +V   M+NGVLTVTVPK EVKKP++KVIEI+TV
Subjt:  HKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV

XP_038875560.1 class I heat shock protein-like [Benincasa hispida]5.0e-5582.39Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRF
        MSLILNELFDPFLSMIN+CPVLNTPIDWKETPAAH+FIADLPGLKKE               QISGDR DA TANDENDESSGHKWR VERCR KFCRRF
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRF

Query:  RLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV
        RLPEN+KAG+VRA MENG+LTVTVPKEEVKKPEKKVIEIETV
Subjt:  RLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q9 SHSP domain-containing protein1.2e-4975Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDE--NDESSGHKWRRVERCREKFCR
        MSLIL+E+FDPFLSMINQCPVLNTP DWKETPAAH+FIADLPGLKK+               QISGDR D  TA ++  NDESSGHKWRRVERCR KFCR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRADAITANDE--NDESSGHKWRRVERCREKFCR

Query:  RFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV
        RFRLP N+KA +VRA MENGVL VTVPKEEVKKPEKKVIEIET+
Subjt:  RFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV

A0A1S3BNE8 class I heat shock protein-like1.8e-5078.01Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR
        MSLILNE+FDPFLSMINQCPVLNTP DWKETPAAHVFIADLPGLKK+               QISGDR  DA  AND+NDESSGHKWRRVERCR KFCRR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR

Query:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE
        FRLP N+KA +V A MENGVL VTVPKEEVKKPEKKVIEIE
Subjt:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE

A0A2C9UG06 SHSP domain-containing protein1.1e-3667.16Show/hide
Query:  LILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPEN
        L ++E+FDPFLSMIN+CPVLNTP DWKETP AHVFI+DLPGLKKE            QISG+R  A   + END     KW RVERCR KF RRFRLPEN
Subjt:  LILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPEN

Query:  MKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI
         K  +V+A MENGVL VTVPKEEVKKP KKVIEI
Subjt:  MKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI

A0A5A7VF09 Class I heat shock protein-like1.2e-4977.3Show/hide
Query:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR
        MSLILNE+FDPFLSMINQCPVLNTP DWKETPAAHVFIADLPGLKK+               QISGDR  DA  AND+NDESSGHKWRRVERCR KFCRR
Subjt:  MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKE---------------QISGDRA-DAITANDENDESSGHKWRRVERCREKFCRR

Query:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE
        FRLP N+KA +V A MENGVL VTVPKE VKKPEKKVIEIE
Subjt:  FRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE

A0A6J1DKY6 18.1 kDa class I heat shock protein-like3.2e-3960.38Show/hide
Query:  MSLILN-----ELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQI---------------------------SGDRADAITANDENDESSG
        MS ILN     EL DPFLS+INQCPVLNTP DWKETPAAHV IADLPGL K+Q+                            GDRA   +  DENDESSG
Subjt:  MSLILN-----ELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQI---------------------------SGDRADAITANDENDESSG

Query:  HKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV
        +KW R+ERCR KFCRRFRLPEN K  +V   M+NGVLTVTVPK EVKKP++KVIEI+TV
Subjt:  HKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIETV

SwissProt top hitse value%identityAlignment
P04794 17.5 kDa class I heat shock protein2.5e-2560.19Show/hide
Query:  LNTPIDWKETPAAHVFIADLPGLKKE----QISGDRADAITA-NDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKK
        ++T +DWKETP AHVF AD+PGLKKE    QI  DR   I+   +   E     W RVER   KF RRFRLPEN K  +V+A MENGVLTVTVPKEEVKK
Subjt:  LNTPIDWKETPAAHVFIADLPGLKKE----QISGDRADAITA-NDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVPKEEVKK

Query:  PEKKVIEI
        P+ K IEI
Subjt:  PEKKVIEI

P19243 18.1 kDa class I heat shock protein8.6e-2660Show/hide
Query:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV
        ++T +DWKETP AHVF ADLPGLKKE            QISG+R  ++   D+NDE     W RVER   KF RRFRLPEN K  KV+A MENGVLTVTV
Subjt:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV

Query:  PKEEVKKPEKKVIEI
        PKEE+KK E K IEI
Subjt:  PKEEVKKPEKKVIEI

P27879 18.1 kDa class I heat shock protein (Fragment)6.6e-2658.97Show/hide
Query:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV
        ++T IDWKETP AHVF ADLPGLKKE            QISG+R   +   D+ND+     W RVER   KF RRFRLPEN K  +V+A MENGVLTVTV
Subjt:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV

Query:  PKEEVKKPEKKVIEIET
        PKEE+KKPE K IEI +
Subjt:  PKEEVKKPEKKVIEIET

P27880 18.2 kDa class I heat shock protein1.5e-2557.39Show/hide
Query:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV
        ++T +DWKETP AHVF ADLPG+KKE            QISG+R  ++   D+ND+     W R+ER   KF RRFRLPEN K  +V+A MENGVLTVTV
Subjt:  LNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTV

Query:  PKEEVKKPEKKVIEI
        PKEEVKKPE K I+I
Subjt:  PKEEVKKPEKKVIEI

P30221 17.8 kDa class I heat shock protein1.5e-2553.28Show/hide
Query:  ELFDPFLSM-------INQCPVLNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRL
        ++FDPF  +              NT IDWKETP  HVF  DLPGLKKE            QISG+R   +   D+ND     KW R+ER   KF RRFRL
Subjt:  ELFDPFLSM-------INQCPVLNTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRL

Query:  PENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI
        PEN K  +V+A MENGVLTVTVPKEEVKKPE K IEI
Subjt:  PENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI

Arabidopsis top hitse value%identityAlignment
AT1G53540.1 HSP20-like chaperones superfamily protein2.2e-2447.01Show/hide
Query:  ELFDPFLSMINQCPVLNTP-----------IDWKETPAAHVFIADLPGLKKEQISGDRADA----ITANDEND-ESSGHKWRRVERCREKFCRRFRLPEN
        ++FDPF   +    + N P           +DW+ETP AHVF ADLPGL+KE++  +  D     I+    N+ E    KW RVER   KF RRFRLPEN
Subjt:  ELFDPFLSMINQCPVLNTP-----------IDWKETPAAHVFIADLPGLKKEQISGDRADA----ITANDEND-ESSGHKWRRVERCREKFCRRFRLPEN

Query:  MKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI
         K  +++A MENGVL+VTVPK   KKPE K I+I
Subjt:  MKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI

AT1G59860.1 HSP20-like chaperones superfamily protein3.2e-2041.73Show/hide
Query:  ILNELFDPF------------LSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQISGDRADAITANDEND-----ESSGHKWRRVERCREKFCRRFR
        I N +FDPF                +   + N  +DWKET  AHVF ADLPG+KKE++  +  D        +     E     W RVER    F R+FR
Subjt:  ILNELFDPF------------LSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQISGDRADAITANDEND-----ESSGHKWRRVERCREKFCRRFR

Query:  LPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE
        LPEN+K  +V+A MENGVLTVTVPK E  K + +V  I+
Subjt:  LPENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEIE

AT2G29500.1 HSP20-like chaperones superfamily protein6.3e-2447.06Show/hide
Query:  ELFDPFLSMIN------QCPVLNTPIDWKETPAAHVFIADLPGLKKEQ------------ISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLP
        +++DPF  + +         ++N  +DW+ETP AHVF ADLPGLKKE+            ISG+R   +   D+ND      W RVER   +F RRFRLP
Subjt:  ELFDPFLSMIN------QCPVLNTPIDWKETPAAHVFIADLPGLKKEQ------------ISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLP

Query:  ENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI
        EN+K  +V+A MENGVLTVTVPK E KK + K I+I
Subjt:  ENMKAGKVRAVMENGVLTVTVPKEEVKKPEKKVIEI

AT3G46230.1 heat shock protein 17.41.2e-2253.51Show/hide
Query:  NTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVP
        N  +DW+ETP AHVF AD+PGLKKE            QISG+R      + EN+E S   W RVER   KF RRFRLPEN K  +V+A MENGVL+VTVP
Subjt:  NTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVP

Query:  KEEVKKPEKKVIEI
        K +  KPE K ++I
Subjt:  KEEVKKPEKKVIEI

AT5G59720.1 heat shock protein 18.26.3e-2454.39Show/hide
Query:  NTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVP
        N  +DWKETP AHVF ADLPGLKKE            QISG+R+       + +E    KW RVER   KF RRFRLPEN K  +V+A MENGVLTV VP
Subjt:  NTPIDWKETPAAHVFIADLPGLKKE------------QISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVP

Query:  KEEVKKPEKKVIEI
        K   KKP+ K I+I
Subjt:  KEEVKKPEKKVIEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGATTCTCAACGAACTCTTCGATCCATTTCTTTCTATGATCAATCAGTGCCCTGTTTTGAATACCCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTT
CATCGCCGATCTGCCCGGGTTAAAGAAGGAGCAGATAAGCGGAGATAGAGCAGACGCCATTACCGCCAATGACGAGAACGACGAGAGTAGTGGTCATAAGTGGAGGCGCG
TGGAGCGTTGTAGGGAGAAATTCTGCAGAAGATTCCGGCTGCCGGAGAATATGAAGGCAGGCAAGGTGAGGGCAGTGATGGAGAACGGAGTTCTGACCGTGACAGTGCCG
AAGGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATTGAGATTGAAACAGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTTCAAGAAATCAACCTTTTTCCCCTATTAAAACATCCCATTTCTCTCTTCCCTTCCATATTGTCACAGAAAATAATTCAAAACTCAAAACAAATAAACCAAAAATCTGA
TCAACATTTCTCAAATTAGTTCTCTCTATCTTCTTGGGAGAAATGTCTTTGATTCTCAACGAACTCTTCGATCCATTTCTTTCTATGATCAATCAGTGCCCTGTTTTGAA
TACCCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATCGCCGATCTGCCCGGGTTAAAGAAGGAGCAGATAAGCGGAGATAGAGCAGACGCCATTACCGCCA
ATGACGAGAACGACGAGAGTAGTGGTCATAAGTGGAGGCGCGTGGAGCGTTGTAGGGAGAAATTCTGCAGAAGATTCCGGCTGCCGGAGAATATGAAGGCAGGCAAGGTG
AGGGCAGTGATGGAGAACGGAGTTCTGACCGTGACAGTGCCGAAGGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATTGAGATTGAAACAGTTTAG
Protein sequenceShow/hide protein sequence
MSLILNELFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQISGDRADAITANDENDESSGHKWRRVERCREKFCRRFRLPENMKAGKVRAVMENGVLTVTVP
KEEVKKPEKKVIEIETV